RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 MYCBPQ99417 103 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-218ENST00000639715 CABP1Q9NZU7 370 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 IL16Q14005 1332 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 GOLGA6L4A6NEF3 574 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 ZNF500O60304 480 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-218ENST00000639715 PLCD4Q9BRC7 762 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 BLMP54132 1417 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-218ENST00000639715 SETD1BQ9UPS6 1966 aaKnown RBP6.82□□□□□ -1.32
SCARB2-218ENST00000639715 ATP2B3Q16720 1220 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 TWISTNBQ3B726 338 aaPredicted RBP6.82□□□□□ -1.32
SCARB2-218ENST00000639715 LMOD2Q6P5Q4 547 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 TNPO1Q92973 898 aaKnown RBP6.82□□□□□ -1.32
SCARB2-218ENST00000639715 MAST1Q9Y2H9 1570 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 ZRSR1Q15695 479 aaKnown RBP6.81□□□□□ -1.32
SCARB2-218ENST00000639715 CTR9Q6PD62 1173 aa6.81□□□□□ -1.32
SCARB2-218ENST00000639715 PPP1R9BQ96SB3 815 aa6.81□□□□□ -1.32
SCARB2-218ENST00000639715 RASSF4Q9H2L5 321 aa6.81□□□□□ -1.32
SCARB2-218ENST00000639715 PHF14O94880 888 aa6.81□□□□□ -1.32
SCARB2-218ENST00000639715 CIZ1Q9ULV3 898 aaPredicted RBP6.81□□□□□ -1.32
SCARB2-218ENST00000639715 KDM5DQ9BY66 1539 aa6.81□□□□□ -1.32
SCARB2-218ENST00000639715 RAPGEF3O95398 923 aa6.81□□□□□ -1.32
SCARB2-218ENST00000639715 NFE2L2Q16236 605 aa6.81□□□□□ -1.32
SCARB2-218ENST00000639715 PLEKHH1Q9ULM0 1364 aa6.81□□□□□ -1.32
SCARB2-218ENST00000639715 C10orf67Q8IYJ2 551 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 KRT222Q8N1A0 295 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 GOLIM4O00461 696 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 FOXD4L5Q5VV16 416 aaPredicted RBP6.8□□□□□ -1.32
SCARB2-218ENST00000639715 CHD1LQ86WJ1 897 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 FOXD4L4Q8WXT5 416 aaPredicted RBP6.8□□□□□ -1.32
SCARB2-218ENST00000639715 ANKRD36BQ8N2N9 1353 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 NPHP1O15259 732 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 RABEP1Q15276 862 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 SSH1Q8WYL5 1049 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 NOLC1Q14978 699 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCARB2-218ENST00000639715 PPP6R1Q9UPN7 881 aa6.8□□□□□ -1.32
SCARB2-218ENST00000639715 ATP6V1DQ9Y5K8 247 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 DENND4BO75064 1496 aaPredicted RBP6.79□□□□□ -1.32
SCARB2-218ENST00000639715 ZNF518AQ6AHZ1 1483 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 AGLP35573 1532 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
SCARB2-218ENST00000639715 GNAI3P08754 354 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 IDI1Q13907 227 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 EFCC1Q9HA90 598 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 BCL2L12Q9HB09 334 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 CDK12Q9NYV4 1490 aaPredicted RBP6.79□□□□□ -1.32
SCARB2-218ENST00000639715 NUTM2FA1L443 756 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 GAS2L2Q8NHY3 880 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 IFT57Q9NWB7 429 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 TSPYL4Q9UJ04 414 aa6.79□□□□□ -1.32
SCARB2-218ENST00000639715 SEC24BO95487 1268 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 IGHDP01880 384 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 TMEM57Q8N5G2 664 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 CCDC61Q9Y6R9 512 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 MCM2P49736 904 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 SETQ01105 290 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-218ENST00000639715 HSP90AB4PQ58FF6 505 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 RPAP2Q8IXW5 612 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-218ENST00000639715 CCDC112Q8NEF3 446 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 DRC1Q96MC2 740 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 NOL10Q9BSC4 688 aaKnown RBP6.78□□□□□ -1.32
SCARB2-218ENST00000639715 FKBP5Q13451 457 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-218ENST00000639715 HDAC1Q13547 482 aaPredicted RBP6.78□□□□□ -1.32
SCARB2-218ENST00000639715 RUFY2Q8WXA3 655 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 RILPL2Q969X0 211 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 SLC26A8Q96RN1 970 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 CARD14Q9BXL6 1004 aa6.78□□□□□ -1.32
SCARB2-218ENST00000639715 SSR1P43307 286 aaKnown RBP6.77□□□□□ -1.33
SCARB2-218ENST00000639715 JARID2Q92833 1246 aaPredicted RBP6.77□□□□□ -1.33
SCARB2-218ENST00000639715 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 POGZQ7Z3K3 1410 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 NRDCO43847 1150 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 TRIM27P14373 513 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 TEFQ10587 303 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 TBC1D32Q96NH3 1257 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 CWC22Q9HCG8 908 aaKnown RBP6.77□□□□□ -1.33
SCARB2-218ENST00000639715 SYCE3A1L190 88 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 CCT4P50991 539 aaKnown RBP6.77□□□□□ -1.33
SCARB2-218ENST00000639715 KLHL40Q2TBA0 621 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 CCDC30Q5VVM6 783 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 RNF216Q9NWF9 866 aaPredicted RBP6.77□□□□□ -1.33
SCARB2-218ENST00000639715 SBNO2Q9Y2G9 1366 aa6.77□□□□□ -1.33
SCARB2-218ENST00000639715 ARHGAP45Q92619 1136 aa6.76□□□□□ -1.33
SCARB2-218ENST00000639715 LTV1Q96GA3 475 aaPredicted RBP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 TSPY26PQ9H489 355 aa6.76□□□□□ -1.33
SCARB2-218ENST00000639715 SAMD9LQ8IVG5 1584 aa6.76□□□□□ -1.33
SCARB2-218ENST00000639715 ATP10AO60312 1499 aa6.76□□□□□ -1.33
SCARB2-218ENST00000639715 K7ELQ4 463 aaPredicted RBP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 TXNDC2Q86VQ3 553 aa6.76□□□□□ -1.33
SCARB2-218ENST00000639715 ZBTB12Q9Y330 459 aaPredicted RBP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 POLR3GO15318 223 aaPredicted RBP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 SULT6B1Q6IMI4 303 aa6.76□□□□□ -1.33
SCARB2-218ENST00000639715 GEMIN8Q9NWZ8 242 aaKnown RBP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 FOXD4L6Q3SYB3 417 aaPredicted RBP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 FOXD4L3Q6VB84 417 aaPredicted RBP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 ANTXR1Q9H6X2 564 aa6.76□□□□□ -1.33
SCARB2-218ENST00000639715 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCARB2-218ENST00000639715 MYO5CQ9NQX4 1742 aa6.76□□□□□ -1.33
SCARB2-218ENST00000639715 ATP7AQ04656 1500 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms