RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
NECAP1-218ENST00000639595 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
NECAP1-218ENST00000639595 PIK3C2AO00443 1686 aa10.84□□□□□ -0.67
NECAP1-218ENST00000639595 RTL5Q5HYW3 569 aaPredicted RBP10.84□□□□□ -0.67
NECAP1-218ENST00000639595 SIRT2Q8IXJ6 389 aa10.84□□□□□ -0.67
NECAP1-218ENST00000639595 GAS2L2Q8NHY3 880 aa10.84□□□□□ -0.67
NECAP1-218ENST00000639595 HOXC9P31274 260 aa10.83□□□□□ -0.68
NECAP1-218ENST00000639595 DEKP35659 375 aaKnown RBP10.83□□□□□ -0.68
NECAP1-218ENST00000639595 KLHL34Q8N239 644 aa10.83□□□□□ -0.68
NECAP1-218ENST00000639595 TAOK2Q9UL54 1235 aa10.83□□□□□ -0.68
NECAP1-218ENST00000639595 FMN2Q9NZ56 1722 aa10.83□□□□□ -0.68
NECAP1-218ENST00000639595 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
NECAP1-218ENST00000639595 USP54Q70EL1 1684 aa10.83□□□□□ -0.68
NECAP1-218ENST00000639595 PTPRCP08575 1304 aa10.83□□□□□ -0.68
NECAP1-218ENST00000639595 FOXO3O43524 673 aa10.82□□□□□ -0.68
NECAP1-218ENST00000639595 ABTB2Q8N961 1025 aa10.82□□□□□ -0.68
NECAP1-218ENST00000639595 RTF1Q92541 710 aaKnown RBP10.82□□□□□ -0.68
NECAP1-218ENST00000639595 RGS12O14924 1447 aa10.82□□□□□ -0.68
NECAP1-218ENST00000639595 RGPD8O14715 1765 aaPredicted RBP10.82□□□□□ -0.68
NECAP1-218ENST00000639595 KRT24Q2M2I5 525 aa10.82□□□□□ -0.68
NECAP1-218ENST00000639595 BECN1Q14457 450 aa10.81□□□□□ -0.68
NECAP1-218ENST00000639595 BABAM1Q9NWV8 329 aa10.81□□□□□ -0.68
NECAP1-218ENST00000639595 RTL1A6NKG5 1358 aa10.81□□□□□ -0.68
NECAP1-218ENST00000639595 BMP2KLQ5H9B9 411 aa10.8□□□□□ -0.68
NECAP1-218ENST00000639595 LNPKQ9C0E8 428 aa10.8□□□□□ -0.68
NECAP1-218ENST00000639595 CHD2O14647 1828 aaKnown RBP10.8□□□□□ -0.68
NECAP1-218ENST00000639595 NWD1Q149M9 1564 aa10.8□□□□□ -0.68
NECAP1-218ENST00000639595 ZNF142P52746 1687 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-218ENST00000639595 C1orf115Q9H7X2 142 aa10.8□□□□□ -0.68
NECAP1-218ENST00000639595 ADGRL3Q9HAR2 1447 aa10.8□□□□□ -0.68
NECAP1-218ENST00000639595 ANKRD45Q5TZF3 282 aa10.79□□□□□ -0.68
NECAP1-218ENST00000639595 DCTPP1Q9H773 170 aa10.79□□□□□ -0.68
NECAP1-218ENST00000639595 TSPYL4Q9UJ04 414 aa10.79□□□□□ -0.68
NECAP1-218ENST00000639595 SOS1Q07889 1333 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-218ENST00000639595 GNAT3A8MTJ3 354 aa10.79□□□□□ -0.68
NECAP1-218ENST00000639595 RPAP2Q8IXW5 612 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-218ENST00000639595 IP6K1Q92551 441 aa10.79□□□□□ -0.68
NECAP1-218ENST00000639595 MARF1Q9Y4F3 1742 aaKnown RBP10.79□□□□□ -0.68
NECAP1-218ENST00000639595 ADAMTSL3P82987 1691 aa10.79□□□□□ -0.68
NECAP1-218ENST00000639595 SLC4A2P04920 1241 aa10.78□□□□□ -0.68
NECAP1-218ENST00000639595 NFKBIBQ15653 356 aa10.78□□□□□ -0.68
NECAP1-218ENST00000639595 NUTM2GQ5VZR2 741 aa10.78□□□□□ -0.68
NECAP1-218ENST00000639595 ANKRD44Q8N8A2 993 aa10.78□□□□□ -0.68
NECAP1-218ENST00000639595 MIS18AQ9NYP9 233 aa10.78□□□□□ -0.68
NECAP1-218ENST00000639595 C22orf23Q9BZE7 217 aa10.78□□□□□ -0.68
NECAP1-218ENST00000639595 SETD1BQ9UPS6 1966 aaKnown RBP10.77□□□□□ -0.68
NECAP1-218ENST00000639595 IL17REQ8NFR9 667 aa10.77□□□□□ -0.69
NECAP1-218ENST00000639595 NPHP4O75161 1426 aaPredicted RBP10.77□□□□□ -0.69
NECAP1-218ENST00000639595 ATP10DQ9P241 1426 aa10.77□□□□□ -0.69
NECAP1-218ENST00000639595 KCNH5Q8NCM2 988 aa10.76□□□□□ -0.69
NECAP1-218ENST00000639595 MAP3K5Q99683 1374 aa10.76□□□□□ -0.69
NECAP1-218ENST00000639595 RBM25P49756 843 aaKnown RBP10.76□□□□□ -0.69
NECAP1-218ENST00000639595 PSME1Q06323 249 aa10.76□□□□□ -0.69
NECAP1-218ENST00000639595 TAF7Q15545 349 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-218ENST00000639595 TBC1D2Q9BYX2 928 aa10.76□□□□□ -0.69
NECAP1-218ENST00000639595 NFAT5O94916 1531 aa10.76□□□□□ -0.69
NECAP1-218ENST00000639595 CCT4P50991 539 aaKnown RBP10.75□□□□□ -0.69
NECAP1-218ENST00000639595 ESCO1Q5FWF5 840 aa10.75□□□□□ -0.69
NECAP1-218ENST00000639595 CEP85Q6P2H3 762 aa10.75□□□□□ -0.69
NECAP1-218ENST00000639595 ANTXR1Q9H6X2 564 aa10.75□□□□□ -0.69
NECAP1-218ENST00000639595 MSH6P52701 1360 aa10.75□□□□□ -0.69
NECAP1-218ENST00000639595 LRRC37A3O60309 1634 aa10.75□□□□□ -0.69
NECAP1-218ENST00000639595 MFAP1P55081 439 aaKnown RBP10.75□□□□□ -0.69
NECAP1-218ENST00000639595 CCDC30Q5VVM6 783 aa10.74□□□□□ -0.69
NECAP1-218ENST00000639595 G2E3Q7L622 706 aa10.74□□□□□ -0.69
NECAP1-218ENST00000639595 RBM33Q96EV2 1170 aaKnown RBP10.74□□□□□ -0.69
NECAP1-218ENST00000639595 MEIS3Q99687 375 aa10.74□□□□□ -0.69
NECAP1-218ENST00000639595 CEMIPQ8WUJ3 1361 aa10.74□□□□□ -0.69
NECAP1-218ENST00000639595 NBPF6Q5VWK0 638 aa10.73□□□□□ -0.69
NECAP1-218ENST00000639595 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
NECAP1-218ENST00000639595 NBPF4Q96M43 638 aa10.73□□□□□ -0.69
NECAP1-218ENST00000639595 STK31Q9BXU1 1019 aa10.73□□□□□ -0.69
NECAP1-218ENST00000639595 C14orf37Q86TY3 774 aa10.73□□□□□ -0.69
NECAP1-218ENST00000639595 LTV1Q96GA3 475 aaPredicted RBP10.73□□□□□ -0.69
NECAP1-218ENST00000639595 ARHGEF25Q86VW2 580 aa10.72□□□□□ -0.69
NECAP1-218ENST00000639595 PHRF1Q9P1Y6 1649 aaKnown RBP10.72□□□□□ -0.69
NECAP1-218ENST00000639595 GCP02774 474 aa10.72□□□□□ -0.69
NECAP1-218ENST00000639595 FLIIQ13045 1269 aa10.72□□□□□ -0.69
NECAP1-218ENST00000639595 TBC1D9Q6ZT07 1266 aa10.72□□□□□ -0.69
NECAP1-218ENST00000639595 ORAI2Q96SN7 254 aa10.72□□□□□ -0.69
NECAP1-218ENST00000639595 PODXL2Q9NZ53 605 aa10.72□□□□□ -0.69
NECAP1-218ENST00000639595 NCAPD2Q15021 1401 aa10.71□□□□□ -0.69
NECAP1-218ENST00000639595 SNX21Q969T3 373 aa10.71□□□□□ -0.69
NECAP1-218ENST00000639595 MST1RQ04912 1400 aa10.71□□□□□ -0.7
NECAP1-218ENST00000639595 F6X3S4 739 aa10.71□□□□□ -0.7
NECAP1-218ENST00000639595 HMMRO75330 724 aa10.71□□□□□ -0.7
NECAP1-218ENST00000639595 FRAT2O75474 233 aaPredicted RBP10.71□□□□□ -0.7
NECAP1-218ENST00000639595 USHBP1Q8N6Y0 703 aa10.71□□□□□ -0.7
NECAP1-218ENST00000639595 HOXB7P09629 217 aa10.7□□□□□ -0.7
NECAP1-218ENST00000639595 GSPT1P15170 499 aaKnown RBP10.7□□□□□ -0.7
NECAP1-218ENST00000639595 SLIT3O75094 1523 aa10.7□□□□□ -0.7
NECAP1-218ENST00000639595 CDC45O75419 566 aa10.7□□□□□ -0.7
NECAP1-218ENST00000639595 GNAI2P04899 355 aa10.7□□□□□ -0.7
NECAP1-218ENST00000639595 TTC22Q5TAA0 569 aa10.7□□□□□ -0.7
NECAP1-218ENST00000639595 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
NECAP1-218ENST00000639595 C19orf44Q9H6X5 657 aa10.7□□□□□ -0.7
NECAP1-218ENST00000639595 GNAI3P08754 354 aa10.69□□□□□ -0.7
NECAP1-218ENST00000639595 AMOTQ4VCS5 1084 aa10.69□□□□□ -0.7
NECAP1-218ENST00000639595 AKAP4Q5JQC9 854 aa10.69□□□□□ -0.7
NECAP1-218ENST00000639595 SLC4A10Q6U841 1118 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms