RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
SCARB2-216ENST00000639300 SSFA2P28290 1259 aa17.24■□□□□ 0.35
SCARB2-216ENST00000639300 HOMER1Q86YM7 354 aa17.24■□□□□ 0.35
SCARB2-216ENST00000639300 PHF8Q9UPP1 1060 aa17.24■□□□□ 0.35
SCARB2-216ENST00000639300 SAFBQ15424 915 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCARB2-216ENST00000639300 C8orf34Q49A92 452 aa17.23■□□□□ 0.35
SCARB2-216ENST00000639300 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
SCARB2-216ENST00000639300 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
SCARB2-216ENST00000639300 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
SCARB2-216ENST00000639300 BMP2KLQ5H9B9 411 aa17.23■□□□□ 0.35
SCARB2-216ENST00000639300 FERMT3Q86UX7 667 aa17.23■□□□□ 0.35
SCARB2-216ENST00000639300 ANKRD36BQ8N2N9 1353 aa17.23■□□□□ 0.35
SCARB2-216ENST00000639300 FKBP4Q02790 459 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCARB2-216ENST00000639300 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
SCARB2-216ENST00000639300 CCDC39Q9UFE4 941 aa17.22■□□□□ 0.35
SCARB2-216ENST00000639300 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
SCARB2-216ENST00000639300 NUP160Q12769 1436 aa17.22■□□□□ 0.35
SCARB2-216ENST00000639300 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
SCARB2-216ENST00000639300 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
SCARB2-216ENST00000639300 DHX16O60231 1041 aaKnown RBP17.22■□□□□ 0.35
SCARB2-216ENST00000639300 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
SCARB2-216ENST00000639300 MEIS3Q99687 375 aa17.22■□□□□ 0.35
SCARB2-216ENST00000639300 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
SCARB2-216ENST00000639300 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
SCARB2-216ENST00000639300 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
SCARB2-216ENST00000639300 SPC24Q8NBT2 197 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 TNPO1Q92973 898 aaKnown RBP17.21■□□□□ 0.35
SCARB2-216ENST00000639300 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 DISP1Q96F81 1524 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 IL16Q14005 1332 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
SCARB2-216ENST00000639300 CCDC173Q0VFZ6 552 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 ASXL2Q76L83 1435 aa17.21■□□□□ 0.35
SCARB2-216ENST00000639300 CASTP20810 708 aaKnown RBP17.21■□□□□ 0.34
SCARB2-216ENST00000639300 STK11IPQ8N1F8 1099 aa17.21■□□□□ 0.34
SCARB2-216ENST00000639300 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.34
SCARB2-216ENST00000639300 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.34
SCARB2-216ENST00000639300 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
SCARB2-216ENST00000639300 CCDC158Q5M9N0 1113 aa17.2■□□□□ 0.34
SCARB2-216ENST00000639300 ESPNB1AK53 854 aa17.2■□□□□ 0.34
SCARB2-216ENST00000639300 GLRX3O76003 335 aaKnown RBP17.2■□□□□ 0.34
SCARB2-216ENST00000639300 SEC24BO95487 1268 aa17.2■□□□□ 0.34
SCARB2-216ENST00000639300 HDAC1Q13547 482 aaPredicted RBP17.2■□□□□ 0.34
SCARB2-216ENST00000639300 TEX14Q8IWB6 1497 aa17.2■□□□□ 0.34
SCARB2-216ENST00000639300 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
SCARB2-216ENST00000639300 A2MP01023 1474 aa17.2■□□□□ 0.34
SCARB2-216ENST00000639300 NCKAP5LQ9HCH0 1330 aa17.2■□□□□ 0.34
SCARB2-216ENST00000639300 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
SCARB2-216ENST00000639300 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
SCARB2-216ENST00000639300 DNAAF4Q8WXU2 420 aa17.19■□□□□ 0.34
SCARB2-216ENST00000639300 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
SCARB2-216ENST00000639300 SYCE3A1L190 88 aa17.19■□□□□ 0.34
SCARB2-216ENST00000639300 KRT85P78386 507 aa17.19■□□□□ 0.34
SCARB2-216ENST00000639300 TSR1Q2NL82 804 aaKnown RBP17.19■□□□□ 0.34
SCARB2-216ENST00000639300 ITSN2Q9NZM3 1697 aa17.19■□□□□ 0.34
SCARB2-216ENST00000639300 CCDC57Q2TAC2 916 aa17.19■□□□□ 0.34
SCARB2-216ENST00000639300 PRPF40BQ6NWY9 871 aaKnown RBP17.19■□□□□ 0.34
SCARB2-216ENST00000639300 TTC39AQ5SRH9 613 aa17.18■□□□□ 0.34
SCARB2-216ENST00000639300 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
SCARB2-216ENST00000639300 PI4KAP2A4QPH2 592 aa17.18■□□□□ 0.34
SCARB2-216ENST00000639300 NUCB1Q02818 461 aa17.18■□□□□ 0.34
SCARB2-216ENST00000639300 CCDC83Q8IWF9 413 aa17.18■□□□□ 0.34
SCARB2-216ENST00000639300 PI4KAP1Q8N8J0 262 aa17.18■□□□□ 0.34
SCARB2-216ENST00000639300 TPM1P09493 284 aa17.17■□□□□ 0.34
SCARB2-216ENST00000639300 STK38Q15208 465 aa17.17■□□□□ 0.34
SCARB2-216ENST00000639300 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
SCARB2-216ENST00000639300 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
SCARB2-216ENST00000639300 ANKRD1Q15327 319 aa17.16■□□□□ 0.34
SCARB2-216ENST00000639300 PTPRCP08575 1304 aa17.16■□□□□ 0.34
SCARB2-216ENST00000639300 LETM1O95202 739 aaPredicted RBP17.16■□□□□ 0.34
SCARB2-216ENST00000639300 ME1P48163 572 aa17.16■□□□□ 0.34
SCARB2-216ENST00000639300 PDE4CQ08493 712 aa17.16■□□□□ 0.34
SCARB2-216ENST00000639300 GDPD2Q9HCC8 539 aa17.16■□□□□ 0.34
SCARB2-216ENST00000639300 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
SCARB2-216ENST00000639300 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
SCARB2-216ENST00000639300 POGZQ7Z3K3 1410 aa17.16■□□□□ 0.34
SCARB2-216ENST00000639300 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
SCARB2-216ENST00000639300 VAMP4O75379 141 aa17.15■□□□□ 0.34
SCARB2-216ENST00000639300 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
SCARB2-216ENST00000639300 MYD88Q99836 296 aa17.15■□□□□ 0.34
SCARB2-216ENST00000639300 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
SCARB2-216ENST00000639300 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-216ENST00000639300 RAB11FIP3O75154 756 aa17.14■□□□□ 0.34
SCARB2-216ENST00000639300 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.34
SCARB2-216ENST00000639300 TNMDQ9H2S6 317 aa17.14■□□□□ 0.34
SCARB2-216ENST00000639300 ARHGEF12Q9NZN5 1544 aa17.14■□□□□ 0.33
SCARB2-216ENST00000639300 CCDC192P0DO97 292 aa17.14■□□□□ 0.33
SCARB2-216ENST00000639300 SDSP20132 328 aa17.14■□□□□ 0.33
SCARB2-216ENST00000639300 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
SCARB2-216ENST00000639300 MRPL50Q8N5N7 158 aaKnown RBP17.14■□□□□ 0.33
SCARB2-216ENST00000639300 PCMTD1Q96MG8 357 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-216ENST00000639300 UHRF1BP1Q6BDS2 1440 aa17.14■□□□□ 0.33
SCARB2-216ENST00000639300 TTC22Q5TAA0 569 aa17.14■□□□□ 0.33
SCARB2-216ENST00000639300 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
SCARB2-216ENST00000639300 DNMT1P26358 1616 aaKnown RBP17.13■□□□□ 0.33
SCARB2-216ENST00000639300 NOC3LQ8WTT2 800 aaKnown RBP17.13■□□□□ 0.33
SCARB2-216ENST00000639300 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 546 ms