RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 PLCH1Q4KWH8 1693 aa15.4■□□□□ 0.06
PAX6-250ENST00000639054 LRP6O75581 1613 aa15.4■□□□□ 0.06
PAX6-250ENST00000639054 E9PSI1 815 aa15.4■□□□□ 0.06
PAX6-250ENST00000639054 CARD10Q9BWT7 1032 aa15.39■□□□□ 0.05
PAX6-250ENST00000639054 TATP17735 454 aaPredicted RBP15.38■□□□□ 0.05
PAX6-250ENST00000639054 PLEKHO1Q53GL0 409 aaPredicted RBP15.38■□□□□ 0.05
PAX6-250ENST00000639054 ZNF530Q6P9A1 599 aaPredicted RBP15.38■□□□□ 0.05
PAX6-250ENST00000639054 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
PAX6-250ENST00000639054 GNAT3A8MTJ3 354 aa15.37■□□□□ 0.05
PAX6-250ENST00000639054 CRB1P82279 1406 aa15.37■□□□□ 0.05
PAX6-250ENST00000639054 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
PAX6-250ENST00000639054 IL17REQ8NFR9 667 aa15.37■□□□□ 0.05
PAX6-250ENST00000639054 NGLY1Q96IV0 654 aa15.37■□□□□ 0.05
PAX6-250ENST00000639054 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
PAX6-250ENST00000639054 RTF1Q92541 710 aaKnown RBP15.36■□□□□ 0.05
PAX6-250ENST00000639054 LGR6Q9HBX8 967 aa15.36■□□□□ 0.05
PAX6-250ENST00000639054 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
PAX6-250ENST00000639054 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
PAX6-250ENST00000639054 MPRIPQ6WCQ1 1025 aa15.36■□□□□ 0.05
PAX6-250ENST00000639054 MIS18AQ9NYP9 233 aa15.36■□□□□ 0.05
PAX6-250ENST00000639054 NRAPQ86VF7 1730 aa15.36■□□□□ 0.05
PAX6-250ENST00000639054 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
PAX6-250ENST00000639054 SLIT2O94813 1529 aa15.35■□□□□ 0.05
PAX6-250ENST00000639054 IL2RBP14784 551 aa15.34■□□□□ 0.05
PAX6-250ENST00000639054 IL16Q14005 1332 aa15.34■□□□□ 0.05
PAX6-250ENST00000639054 AKAP4Q5JQC9 854 aa15.33■□□□□ 0.05
PAX6-250ENST00000639054 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.05
PAX6-250ENST00000639054 CYP27B1O15528 508 aa15.33■□□□□ 0.04
PAX6-250ENST00000639054 ZNF853P0CG23 659 aa15.33■□□□□ 0.04
PAX6-250ENST00000639054 C1orf141Q5JVX7 400 aa15.33■□□□□ 0.04
PAX6-250ENST00000639054 MEX3CQ5U5Q3 659 aaKnown RBP15.33■□□□□ 0.04
PAX6-250ENST00000639054 MBIPQ9NS73 344 aa15.33■□□□□ 0.04
PAX6-250ENST00000639054 SPG7Q9UQ90 795 aa15.33■□□□□ 0.04
PAX6-250ENST00000639054 CCDC9Q9Y3X0 531 aaKnown RBP15.33■□□□□ 0.04
PAX6-250ENST00000639054 OVOS2A0A0G2JMS6 1433 aa15.32■□□□□ 0.04
PAX6-250ENST00000639054 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
PAX6-250ENST00000639054 RCAN3Q9UKA8 241 aa15.32■□□□□ 0.04
PAX6-250ENST00000639054 BCL9LQ86UU0 1499 aa15.32■□□□□ 0.04
PAX6-250ENST00000639054 HTATSF1O43719 755 aaKnown RBP15.32■□□□□ 0.04
PAX6-250ENST00000639054 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
PAX6-250ENST00000639054 IFT57Q9NWB7 429 aa15.32■□□□□ 0.04
PAX6-250ENST00000639054 PHKG2P15735 406 aa15.31■□□□□ 0.04
PAX6-250ENST00000639054 GNAI1P63096 354 aa15.31■□□□□ 0.04
PAX6-250ENST00000639054 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
PAX6-250ENST00000639054 ZCRB1Q8TBF4 217 aaKnown RBP15.31■□□□□ 0.04
PAX6-250ENST00000639054 NWD2Q9ULI1 1742 aa15.31■□□□□ 0.04
PAX6-250ENST00000639054 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
PAX6-250ENST00000639054 CALD1Q05682 793 aaKnown RBP15.31■□□□□ 0.04
PAX6-250ENST00000639054 GTF3C3Q9Y5Q9 886 aa15.31■□□□□ 0.04
PAX6-250ENST00000639054 SPATA31A1Q5TZJ5 1347 aa15.31■□□□□ 0.04
PAX6-250ENST00000639054 PKD1L3Q7Z443 1732 aa15.3■□□□□ 0.04
PAX6-250ENST00000639054 PARP4Q9UKK3 1724 aaKnown RBP15.3■□□□□ 0.04
PAX6-250ENST00000639054 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
PAX6-250ENST00000639054 RNMTO43148 476 aaKnown RBP15.3■□□□□ 0.04
PAX6-250ENST00000639054 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
PAX6-250ENST00000639054 DDX54Q8TDD1 881 aaKnown RBP15.3■□□□□ 0.04
PAX6-250ENST00000639054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.04
PAX6-250ENST00000639054 USP21Q9UK80 565 aa15.29■□□□□ 0.04
PAX6-250ENST00000639054 SPATA31A5Q5VU36 1347 aa15.29■□□□□ 0.04
PAX6-250ENST00000639054 SPATA31A7Q8IWB4 1347 aa15.29■□□□□ 0.04
PAX6-250ENST00000639054 ELL2O00472 640 aaPredicted RBP15.29■□□□□ 0.04
PAX6-250ENST00000639054 CHL1O00533 1208 aa15.29■□□□□ 0.04
PAX6-250ENST00000639054 KRT24Q2M2I5 525 aa15.29■□□□□ 0.04
PAX6-250ENST00000639054 IFNL2Q8IZJ0 200 aa15.29■□□□□ 0.04
PAX6-250ENST00000639054 LRRC37A3O60309 1634 aa15.29■□□□□ 0.04
PAX6-250ENST00000639054 CEMIPQ8WUJ3 1361 aa15.28■□□□□ 0.04
PAX6-250ENST00000639054 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
PAX6-250ENST00000639054 DISP2A7MBM2 1401 aa15.28■□□□□ 0.04
PAX6-250ENST00000639054 SHANK3Q9BYB0 1731 aa15.28■□□□□ 0.04
PAX6-250ENST00000639054 KDM6AO15550 1401 aaPredicted RBP15.27■□□□□ 0.04
PAX6-250ENST00000639054 AFF2P51816 1311 aa15.27■□□□□ 0.04
PAX6-250ENST00000639054 BCAR3O75815 825 aa15.27■□□□□ 0.04
PAX6-250ENST00000639054 C8orf58Q8NAV2 365 aa15.27■□□□□ 0.04
PAX6-250ENST00000639054 TSPYL4Q9UJ04 414 aa15.27■□□□□ 0.04
PAX6-250ENST00000639054 PLIN1O60240 522 aa15.27■□□□□ 0.03
PAX6-250ENST00000639054 TAF7Q15545 349 aaPredicted RBP15.26■□□□□ 0.03
PAX6-250ENST00000639054 PCDH11XQ9BZA7 1347 aa15.26■□□□□ 0.03
PAX6-250ENST00000639054 PCDH11YQ9BZA8 1340 aa15.26■□□□□ 0.03
PAX6-250ENST00000639054 TEFQ10587 303 aa15.26■□□□□ 0.03
PAX6-250ENST00000639054 VPS72Q15906 364 aa15.26■□□□□ 0.03
PAX6-250ENST00000639054 BCL2L13Q9BXK5 485 aa15.26■□□□□ 0.03
PAX6-250ENST00000639054 KCNQ3O43525 872 aa15.25■□□□□ 0.03
PAX6-250ENST00000639054 FAM98CQ17RN3 349 aaKnown RBP15.25■□□□□ 0.03
PAX6-250ENST00000639054 WNK3Q9BYP7 1800 aa15.25■□□□□ 0.03
PAX6-250ENST00000639054 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
PAX6-250ENST00000639054 NFATC2IPQ8NCF5 419 aa15.24■□□□□ 0.03
PAX6-250ENST00000639054 EXOC5O00471 708 aa15.23■□□□□ 0.03
PAX6-250ENST00000639054 TCERG1O14776 1098 aaKnown RBP15.23■□□□□ 0.03
PAX6-250ENST00000639054 RARSP54136 660 aaKnown RBP15.23■□□□□ 0.03
PAX6-250ENST00000639054 FKBP8Q14318 412 aa15.23■□□□□ 0.03
PAX6-250ENST00000639054 DCAF5Q96JK2 942 aa15.23■□□□□ 0.03
PAX6-250ENST00000639054 THRAP3Q9Y2W1 955 aaKnown RBP15.23■□□□□ 0.03
PAX6-250ENST00000639054 ADAMTS7Q9UKP4 1686 aa15.23■□□□□ 0.03
PAX6-250ENST00000639054 RNF123Q5XPI4 1314 aa15.23■□□□□ 0.03
PAX6-250ENST00000639054 BTBD11A6QL63 1104 aa15.23■□□□□ 0.03
PAX6-250ENST00000639054 RRP1P56182 461 aaKnown RBP15.23■□□□□ 0.03
PAX6-250ENST00000639054 FBXO41Q8TF61 875 aa15.23■□□□□ 0.03
PAX6-250ENST00000639054 PLEKHG2Q9H7P9 1386 aa15.23■□□□□ 0.03
PAX6-250ENST00000639054 VAMP4O75379 141 aa15.22■□□□□ 0.03
PAX6-250ENST00000639054 TWISTNBQ3B726 338 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms