RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 RRP9O43818 475 aaKnown RBP13.44□□□□□ -0.26
SNIP1-204ENST00000638725 ZNF445P59923 1031 aa13.44□□□□□ -0.26
SNIP1-204ENST00000638725 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
SNIP1-204ENST00000638725 ZSCAN23Q3MJ62 389 aa13.44□□□□□ -0.26
SNIP1-204ENST00000638725 COG3Q96JB2 828 aa13.44□□□□□ -0.26
SNIP1-204ENST00000638725 DLC1Q96QB1 1528 aa13.44□□□□□ -0.26
SNIP1-204ENST00000638725 ZSCAN30Q86W11 494 aa13.43□□□□□ -0.26
SNIP1-204ENST00000638725 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
SNIP1-204ENST00000638725 RPAP2Q8IXW5 612 aaPredicted RBP13.43□□□□□ -0.26
SNIP1-204ENST00000638725 MEIS3Q99687 375 aa13.43□□□□□ -0.26
SNIP1-204ENST00000638725 CPS1P31327 1500 aa13.43□□□□□ -0.26
SNIP1-204ENST00000638725 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
SNIP1-204ENST00000638725 WASLO00401 505 aaPredicted RBP13.43□□□□□ -0.26
SNIP1-204ENST00000638725 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
SNIP1-204ENST00000638725 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
SNIP1-204ENST00000638725 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
SNIP1-204ENST00000638725 ST18O60284 1047 aa13.42□□□□□ -0.26
SNIP1-204ENST00000638725 CHAMP1Q96JM3 812 aa13.42□□□□□ -0.26
SNIP1-204ENST00000638725 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
SNIP1-204ENST00000638725 CASC1Q6TDU7 716 aa13.42□□□□□ -0.26
SNIP1-204ENST00000638725 RBSNQ9H1K0 784 aa13.42□□□□□ -0.26
SNIP1-204ENST00000638725 CWC22Q9HCG8 908 aaKnown RBP13.42□□□□□ -0.26
SNIP1-204ENST00000638725 RBM27Q9P2N5 1060 aaKnown RBP13.42□□□□□ -0.26
SNIP1-204ENST00000638725 ZDHHC9Q9Y397 364 aa13.42□□□□□ -0.26
SNIP1-204ENST00000638725 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
SNIP1-204ENST00000638725 MCM10Q7L590 875 aa13.41□□□□□ -0.26
SNIP1-204ENST00000638725 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
SNIP1-204ENST00000638725 MSNP26038 577 aaKnown RBP13.4□□□□□ -0.26
SNIP1-204ENST00000638725 PRIM1P49642 420 aaKnown RBP13.4□□□□□ -0.26
SNIP1-204ENST00000638725 SULT6B1Q6IMI4 303 aa13.4□□□□□ -0.26
SNIP1-204ENST00000638725 GPT2Q8TD30 523 aa13.4□□□□□ -0.26
SNIP1-204ENST00000638725 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
SNIP1-204ENST00000638725 SETD1AO15047 1707 aaKnown RBP13.4□□□□□ -0.26
SNIP1-204ENST00000638725 TPM2P07951 284 aa13.4□□□□□ -0.26
SNIP1-204ENST00000638725 CHL1O00533 1208 aa13.39□□□□□ -0.27
SNIP1-204ENST00000638725 REC8O95072 547 aa13.39□□□□□ -0.27
SNIP1-204ENST00000638725 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
SNIP1-204ENST00000638725 A2ML1A8K2U0 1454 aa13.39□□□□□ -0.27
SNIP1-204ENST00000638725 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
SNIP1-204ENST00000638725 FOXD4L5Q5VV16 416 aaPredicted RBP13.39□□□□□ -0.27
SNIP1-204ENST00000638725 FOXD4L4Q8WXT5 416 aaPredicted RBP13.39□□□□□ -0.27
SNIP1-204ENST00000638725 ERC2O15083 957 aa13.38□□□□□ -0.27
SNIP1-204ENST00000638725 PTPRCP08575 1304 aa13.38□□□□□ -0.27
SNIP1-204ENST00000638725 OFD1O75665 1012 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
SNIP1-204ENST00000638725 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
SNIP1-204ENST00000638725 TMEM63CQ9P1W3 806 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 MON2Q7Z3U7 1717 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 METP08581 1390 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 TSHZ3Q63HK5 1081 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 PDLIM2Q96JY6 352 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 KIAA0232Q92628 1395 aa13.37□□□□□ -0.27
SNIP1-204ENST00000638725 F6X3S4 739 aa13.36□□□□□ -0.27
SNIP1-204ENST00000638725 PDE1AP54750 535 aa13.36□□□□□ -0.27
SNIP1-204ENST00000638725 SLC4A10Q6U841 1118 aa13.36□□□□□ -0.27
SNIP1-204ENST00000638725 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
SNIP1-204ENST00000638725 MIS18AQ9NYP9 233 aa13.36□□□□□ -0.27
SNIP1-204ENST00000638725 C3P01024 1663 aa13.36□□□□□ -0.27
SNIP1-204ENST00000638725 NEK4P51957 841 aa13.36□□□□□ -0.27
SNIP1-204ENST00000638725 NRKQ7Z2Y5 1582 aa13.36□□□□□ -0.27
SNIP1-204ENST00000638725 SYCE3A1L190 88 aa13.35□□□□□ -0.27
SNIP1-204ENST00000638725 HMMRO75330 724 aa13.35□□□□□ -0.27
SNIP1-204ENST00000638725 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.35□□□□□ -0.27
SNIP1-204ENST00000638725 G2E3Q7L622 706 aa13.35□□□□□ -0.27
SNIP1-204ENST00000638725 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
SNIP1-204ENST00000638725 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
SNIP1-204ENST00000638725 PRR36Q9H6K5 1346 aa13.35□□□□□ -0.27
SNIP1-204ENST00000638725 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNIP1-204ENST00000638725 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.35□□□□□ -0.27
SNIP1-204ENST00000638725 HS1BP3Q53T59 392 aa13.34□□□□□ -0.27
SNIP1-204ENST00000638725 LRSAM1Q6UWE0 723 aa13.34□□□□□ -0.27
SNIP1-204ENST00000638725 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
SNIP1-204ENST00000638725 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
SNIP1-204ENST00000638725 EXOC6BQ9Y2D4 811 aa13.34□□□□□ -0.27
SNIP1-204ENST00000638725 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.27
SNIP1-204ENST00000638725 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.27
SNIP1-204ENST00000638725 CRB1P82279 1406 aa13.33□□□□□ -0.28
SNIP1-204ENST00000638725 AKAP12Q02952 1782 aa13.33□□□□□ -0.28
SNIP1-204ENST00000638725 XPCQ01831 940 aaPredicted RBP13.33□□□□□ -0.28
SNIP1-204ENST00000638725 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
SNIP1-204ENST00000638725 ITSN1Q15811 1721 aa13.33□□□□□ -0.28
SNIP1-204ENST00000638725 PALD1Q9ULE6 856 aa13.32□□□□□ -0.28
SNIP1-204ENST00000638725 R3HCC1Q9Y3T6 440 aaKnown RBP13.32□□□□□ -0.28
SNIP1-204ENST00000638725 FOXO3O43524 673 aa13.32□□□□□ -0.28
SNIP1-204ENST00000638725 ESYT1Q9BSJ8 1104 aa13.32□□□□□ -0.28
SNIP1-204ENST00000638725 SOX12O15370 315 aa13.32□□□□□ -0.28
SNIP1-204ENST00000638725 RNF214Q8ND24 703 aa13.32□□□□□ -0.28
SNIP1-204ENST00000638725 ZNF500O60304 480 aaPredicted RBP13.31□□□□□ -0.28
SNIP1-204ENST00000638725 BRD1O95696 1058 aa13.31□□□□□ -0.28
SNIP1-204ENST00000638725 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
SNIP1-204ENST00000638725 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
SNIP1-204ENST00000638725 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
SNIP1-204ENST00000638725 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
SNIP1-204ENST00000638725 CCT4P50991 539 aaKnown RBP13.3□□□□□ -0.28
SNIP1-204ENST00000638725 MLECQ14165 292 aa13.3□□□□□ -0.28
SNIP1-204ENST00000638725 ZKSCAN5Q9Y2L8 839 aa13.3□□□□□ -0.28
SNIP1-204ENST00000638725 MBD3O95983 291 aa13.3□□□□□ -0.28
SNIP1-204ENST00000638725 GNAI2P04899 355 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms