RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 ANKRD44Q8N8A2 993 aa11.84□□□□□ -0.51
HNRNPU-216ENST00000638716 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
HNRNPU-216ENST00000638716 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
HNRNPU-216ENST00000638716 ISY1Q9ULR0 285 aaKnown RBP11.84□□□□□ -0.51
HNRNPU-216ENST00000638716 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.51
HNRNPU-216ENST00000638716 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
HNRNPU-216ENST00000638716 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
HNRNPU-216ENST00000638716 PEAK1Q9H792 1746 aa11.83□□□□□ -0.52
HNRNPU-216ENST00000638716 SKOR2Q2VWA4 1001 aaPredicted RBP11.83□□□□□ -0.52
HNRNPU-216ENST00000638716 CHL1O00533 1208 aa11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 EIF5BO60841 1220 aaKnown RBP11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 PTMSP20962 102 aa11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 RPAP2Q8IXW5 612 aaPredicted RBP11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 FMN2Q9NZ56 1722 aa11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 MCM10Q7L590 875 aa11.82□□□□□ -0.52
HNRNPU-216ENST00000638716 SSFA2P28290 1259 aa11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 CEP85Q6P2H3 762 aa11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 MSH6P52701 1360 aa11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 KIAA0232Q92628 1395 aa11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 RABEP1Q15276 862 aa11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 GAS2L3Q86XJ1 694 aa11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 OTUD7AQ8TE49 926 aaPredicted RBP11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 USP26Q9BXU7 913 aa11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 TTC21BQ7Z4L5 1316 aa11.81□□□□□ -0.52
HNRNPU-216ENST00000638716 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
HNRNPU-216ENST00000638716 RIMS1Q86UR5 1692 aaKnown RBP11.8□□□□□ -0.52
HNRNPU-216ENST00000638716 PTPRCP08575 1304 aa11.8□□□□□ -0.52
HNRNPU-216ENST00000638716 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
HNRNPU-216ENST00000638716 OVOS2A0A0J9YW53 1432 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 OVOS2Q6IE36 1432 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 SMARCA5O60264 1052 aaPredicted RBP11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 CLEC17AQ6ZS10 378 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 MEIS3Q99687 375 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 SDSP20132 328 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 CLCN1P35523 988 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 HSP90AB2PQ58FF8 381 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 ACEP12821 1306 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 ROBO2Q9HCK4 1378 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 TUBGCP6Q96RT7 1819 aa11.79□□□□□ -0.52
HNRNPU-216ENST00000638716 APBB1O00213 710 aa11.78□□□□□ -0.52
HNRNPU-216ENST00000638716 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
HNRNPU-216ENST00000638716 BAG4O95429 457 aaKnown RBP11.78□□□□□ -0.52
HNRNPU-216ENST00000638716 CRB1P82279 1406 aa11.78□□□□□ -0.52
HNRNPU-216ENST00000638716 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.52
HNRNPU-216ENST00000638716 SLC4A2P04920 1241 aa11.77□□□□□ -0.52
HNRNPU-216ENST00000638716 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.52
HNRNPU-216ENST00000638716 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
HNRNPU-216ENST00000638716 ESF1Q9H501 851 aaKnown RBP11.77□□□□□ -0.53
HNRNPU-216ENST00000638716 USP6P35125 1406 aa11.76□□□□□ -0.53
HNRNPU-216ENST00000638716 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
HNRNPU-216ENST00000638716 MIS18AQ9NYP9 233 aa11.76□□□□□ -0.53
HNRNPU-216ENST00000638716 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
HNRNPU-216ENST00000638716 NUCB2P80303 420 aa11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 ADAMTS13Q76LX8 1427 aa11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 USP31Q70CQ4 1352 aa11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 TMEM2Q9UHN6 1383 aa11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 SOX12O15370 315 aa11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 G2E3Q7L622 706 aa11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 DDX49Q9Y6V7 483 aaKnown RBP11.75□□□□□ -0.53
HNRNPU-216ENST00000638716 FOXO3O43524 673 aa11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 CYP2E1P05181 493 aaPredicted RBP11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 TNRQ92752 1358 aa11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 MAP3K19Q56UN5 1328 aa11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 F6X3S4 739 aa11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 HMMRO75330 724 aa11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 MTHFSDQ2M296 383 aaKnown RBP11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 SLC4A10Q6U841 1118 aa11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 ARHGEF10O15013 1369 aa11.74□□□□□ -0.53
HNRNPU-216ENST00000638716 ESPNB1AK53 854 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 ST18O60284 1047 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 REC8O95072 547 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 MCTP1Q6DN14 999 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 TRIM44Q96DX7 344 aaPredicted RBP11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 TSPYL4Q9UJ04 414 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 PKP1Q13835 747 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 OSBPL3Q9H4L5 887 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 CWC22Q9HCG8 908 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 XRN1Q8IZH2 1706 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 FAM208AQ9UK61 1670 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 ERC2O15083 957 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 CCT4P50991 539 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 PDE1AP54750 535 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 SSH2Q76I76 1423 aa11.73□□□□□ -0.53
HNRNPU-216ENST00000638716 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
HNRNPU-216ENST00000638716 ZGPATQ8N5A5 531 aaKnown RBP11.72□□□□□ -0.53
HNRNPU-216ENST00000638716 N4BP2Q86UW6 1770 aaPredicted RBP11.72□□□□□ -0.53
HNRNPU-216ENST00000638716 LMBRD1Q9NUN5 540 aa11.72□□□□□ -0.53
HNRNPU-216ENST00000638716 KCNA4P22459 653 aa11.71□□□□□ -0.53
HNRNPU-216ENST00000638716 NAP1L5Q96NT1 182 aaPredicted RBP11.71□□□□□ -0.53
HNRNPU-216ENST00000638716 GNAI2P04899 355 aa11.71□□□□□ -0.54
HNRNPU-216ENST00000638716 NASPP49321 788 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms