RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TATP17735 454 aaPredicted RBP29.54■■■□□ 2.32
SCN1B-206ENST00000638536 IL13P35225 146 aa29.54■■■□□ 2.32
SCN1B-206ENST00000638536 EN1Q05925 392 aaPredicted RBP29.54■■■□□ 2.32
SCN1B-206ENST00000638536 IGSF1Q8N6C5 1336 aa29.54■■■□□ 2.32
SCN1B-206ENST00000638536 KCNQ2O43526 872 aa29.52■■■□□ 2.32
SCN1B-206ENST00000638536 APBA3O96018 575 aa29.52■■■□□ 2.32
SCN1B-206ENST00000638536 ACSBG1Q96GR2 724 aa29.52■■■□□ 2.32
SCN1B-206ENST00000638536 BAG6P46379 1132 aa29.5■■■□□ 2.31
SCN1B-206ENST00000638536 AEBP1Q8IUX7 1158 aa29.5■■■□□ 2.31
SCN1B-206ENST00000638536 PKD1L3Q7Z443 1732 aa29.5■■■□□ 2.31
SCN1B-206ENST00000638536 PPP2R1AP30153 589 aa29.48■■■□□ 2.31
SCN1B-206ENST00000638536 EZH2Q15910 746 aaKnown RBP29.48■■■□□ 2.31
SCN1B-206ENST00000638536 COL3A1P02461 1466 aaPredicted RBP29.48■■■□□ 2.31
SCN1B-206ENST00000638536 BCL11BQ9C0K0 894 aaPredicted RBP29.47■■■□□ 2.31
SCN1B-206ENST00000638536 CAMKK2Q96RR4 588 aa29.46■■■□□ 2.31
SCN1B-206ENST00000638536 NHSQ6T4R5 1651 aa29.46■■■□□ 2.31
SCN1B-206ENST00000638536 CYP27B1O15528 508 aa29.45■■■□□ 2.31
SCN1B-206ENST00000638536 SULT6B1Q6IMI4 303 aa29.44■■■□□ 2.3
SCN1B-206ENST00000638536 DOT1LQ8TEK3 1739 aa29.43■■■□□ 2.3
SCN1B-206ENST00000638536 PARD3Q8TEW0 1356 aa29.43■■■□□ 2.3
SCN1B-206ENST00000638536 DIAPH1O60610 1272 aaKnown RBP29.42■■■□□ 2.3
SCN1B-206ENST00000638536 PCDH11XQ9BZA7 1347 aa29.42■■■□□ 2.3
SCN1B-206ENST00000638536 PCDH11YQ9BZA8 1340 aa29.42■■■□□ 2.3
SCN1B-206ENST00000638536 BTAF1O14981 1849 aa29.41■■■□□ 2.3
SCN1B-206ENST00000638536 KDRP35968 1356 aa29.39■■■□□ 2.3
SCN1B-206ENST00000638536 HMOX1P09601 288 aa29.39■■■□□ 2.3
SCN1B-206ENST00000638536 SRCAPQ6ZRS2 3230 aa29.39■■■□□ 2.3
SCN1B-206ENST00000638536 PRIM1P49642 420 aaKnown RBP29.38■■■□□ 2.29
SCN1B-206ENST00000638536 SPG7Q9UQ90 795 aa29.38■■■□□ 2.29
SCN1B-206ENST00000638536 RREB1Q92766 1687 aa29.37■■■□□ 2.29
SCN1B-206ENST00000638536 ZNF316A6NFI3 1004 aaPredicted RBP29.37■■■□□ 2.29
SCN1B-206ENST00000638536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.37■■■□□ 2.29
SCN1B-206ENST00000638536 TOGARAM1Q9Y4F4 1720 aa29.37■■■□□ 2.29
SCN1B-206ENST00000638536 PLSCR1O15162 318 aa29.35■■■□□ 2.29
SCN1B-206ENST00000638536 PROM2Q8N271 834 aa29.35■■■□□ 2.29
SCN1B-206ENST00000638536 SYTL4Q96C24 671 aaPredicted RBP29.35■■■□□ 2.29
SCN1B-206ENST00000638536 NUP188Q5SRE5 1749 aa29.34■■■□□ 2.29
SCN1B-206ENST00000638536 ITGB4P16144 1822 aa29.34■■■□□ 2.29
SCN1B-206ENST00000638536 RGPD3A6NKT7 1758 aaPredicted RBP29.34■■■□□ 2.29
SCN1B-206ENST00000638536 RGPD4Q7Z3J3 1758 aa29.34■■■□□ 2.29
SCN1B-206ENST00000638536 U2SURPO15042 1029 aaKnown RBP29.33■■■□□ 2.29
SCN1B-206ENST00000638536 PHKG2P15735 406 aa29.33■■■□□ 2.29
SCN1B-206ENST00000638536 NKX1-1Q15270 411 aaPredicted RBP29.31■■■□□ 2.28
SCN1B-206ENST00000638536 PLEKHO1Q53GL0 409 aaPredicted RBP29.3■■■□□ 2.28
SCN1B-206ENST00000638536 IFNL2Q8IZJ0 200 aa29.3■■■□□ 2.28
SCN1B-206ENST00000638536 CFAP53Q96M91 514 aa29.3■■■□□ 2.28
SCN1B-206ENST00000638536 PLEKHG2Q9H7P9 1386 aa29.28■■■□□ 2.28
SCN1B-206ENST00000638536 RALBP1Q15311 655 aa29.27■■■□□ 2.28
SCN1B-206ENST00000638536 ZNF530Q6P9A1 599 aaPredicted RBP29.27■■■□□ 2.28
SCN1B-206ENST00000638536 TXNRD1Q16881 649 aa29.26■■■□□ 2.27
SCN1B-206ENST00000638536 AMOTQ4VCS5 1084 aa29.26■■■□□ 2.27
SCN1B-206ENST00000638536 MPRIPQ6WCQ1 1025 aa29.25■■■□□ 2.27
SCN1B-206ENST00000638536 PSDA5PKW4 1024 aaPredicted RBP29.23■■■□□ 2.27
SCN1B-206ENST00000638536 KDM6AO15550 1401 aaPredicted RBP29.22■■■□□ 2.27
SCN1B-206ENST00000638536 MTHFSDQ2M296 383 aaKnown RBP29.21■■■□□ 2.27
SCN1B-206ENST00000638536 PIGBQ92521 554 aa29.21■■■□□ 2.27
SCN1B-206ENST00000638536 VIRMAQ69YN4 1812 aaKnown RBP29.21■■■□□ 2.27
SCN1B-206ENST00000638536 LY75O60449 1722 aa29.21■■■□□ 2.27
SCN1B-206ENST00000638536 KCNQ4P56696 695 aa29.2■■■□□ 2.27
SCN1B-206ENST00000638536 RSPH6AQ9H0K4 717 aa29.2■■■□□ 2.27
SCN1B-206ENST00000638536 PRKRIP1Q9H875 184 aaPredicted RBP29.2■■■□□ 2.27
SCN1B-206ENST00000638536 LRRC4BQ9NT99 713 aa29.2■■■□□ 2.27
SCN1B-206ENST00000638536 U2AF1L5P0DN76 240 aaPredicted RBP29.2■■■□□ 2.26
SCN1B-206ENST00000638536 U2AF1Q01081 240 aaKnown RBP eCLIP29.2■■■□□ 2.26
SCN1B-206ENST00000638536 R3HDM1Q15032 1099 aaKnown RBP29.2■■■□□ 2.26
SCN1B-206ENST00000638536 ANO8Q9HCE9 1232 aaPredicted RBP29.2■■■□□ 2.26
SCN1B-206ENST00000638536 NUDCQ9Y266 331 aa29.2■■■□□ 2.26
SCN1B-206ENST00000638536 MYBBP1AQ9BQG0 1328 aaKnown RBP29.18■■■□□ 2.26
SCN1B-206ENST00000638536 PHACTR3Q96KR7 559 aa29.18■■■□□ 2.26
SCN1B-206ENST00000638536 PRKAR2BP31323 418 aa29.17■■■□□ 2.26
SCN1B-206ENST00000638536 C1orf141Q5JVX7 400 aa29.17■■■□□ 2.26
SCN1B-206ENST00000638536 SCN11AQ9UI33 1791 aa29.17■■■□□ 2.26
SCN1B-206ENST00000638536 DCAF5Q96JK2 942 aa29.16■■■□□ 2.26
SCN1B-206ENST00000638536 AKAP4Q5JQC9 854 aa29.14■■■□□ 2.26
SCN1B-206ENST00000638536 HSP90AB1P08238 724 aaKnown RBP29.13■■■□□ 2.25
SCN1B-206ENST00000638536 LGR6Q9HBX8 967 aa29.13■■■□□ 2.25
SCN1B-206ENST00000638536 TMOD3Q9NYL9 352 aa29.13■■■□□ 2.25
SCN1B-206ENST00000638536 PAPPAQ13219 1627 aa29.13■■■□□ 2.25
SCN1B-206ENST00000638536 ERVV-2B6SEH9 535 aa29.12■■■□□ 2.25
SCN1B-206ENST00000638536 NBPF14Q5TI25 921 aa29.12■■■□□ 2.25
SCN1B-206ENST00000638536 ASAP1Q9ULH1 1129 aa29.12■■■□□ 2.25
SCN1B-206ENST00000638536 PALLDQ8WX93 1383 aa29.1■■■□□ 2.25
SCN1B-206ENST00000638536 FCHSD2O94868 740 aa29.1■■■□□ 2.25
SCN1B-206ENST00000638536 SLC27A3Q5K4L6 730 aa29.08■■■□□ 2.25
SCN1B-206ENST00000638536 NFATC2IPQ8NCF5 419 aa29.08■■■□□ 2.25
SCN1B-206ENST00000638536 ATG3Q9NT62 314 aa29.08■■■□□ 2.25
SCN1B-206ENST00000638536 ADAMTS7Q9UKP4 1686 aa29.07■■■□□ 2.24
SCN1B-206ENST00000638536 CABP4P57796 275 aa29.07■■■□□ 2.24
SCN1B-206ENST00000638536 CCNL1Q9UK58 526 aaPredicted RBP29.07■■■□□ 2.24
SCN1B-206ENST00000638536 RNMTO43148 476 aaKnown RBP29.06■■■□□ 2.24
SCN1B-206ENST00000638536 ZNF827Q17R98 1081 aa29.06■■■□□ 2.24
SCN1B-206ENST00000638536 PDGFDQ9GZP0 370 aaPredicted RBP29.06■■■□□ 2.24
SCN1B-206ENST00000638536 TAF1LQ8IZX4 1826 aa29.06■■■□□ 2.24
SCN1B-206ENST00000638536 SLC15A2Q16348 729 aa29.05■■■□□ 2.24
SCN1B-206ENST00000638536 GAS2L2Q8NHY3 880 aa29.05■■■□□ 2.24
SCN1B-206ENST00000638536 PLEKHF1Q96S99 279 aa29.04■■■□□ 2.24
SCN1B-206ENST00000638536 IL17REQ8NFR9 667 aa29.03■■■□□ 2.24
SCN1B-206ENST00000638536 SMARCC1Q92922 1105 aaPredicted RBP29.03■■■□□ 2.24
SCN1B-206ENST00000638536 STK32BQ9NY57 414 aa29.02■■■□□ 2.24
SCN1B-206ENST00000638536 MAP3K5Q99683 1374 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms