RNA–Protein interactions for RNA: ENST00000638473.1

SCN3A-208, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-208ENST00000638473 ZFYVE9O95405 1425 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 LTKP29376 864 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 CLASRPQ8N2M8 674 aaKnown RBP5.32□□□□□ -1.56
SCN3A-208ENST00000638473 SLC4A3P48751 1232 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 CCDC158Q5M9N0 1113 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 DDX17Q92841 729 aaKnown RBP5.32□□□□□ -1.56
SCN3A-208ENST00000638473 FSD1Q9BTV5 496 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 ZPR1O75312 459 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 CSPP1Q1MSJ5 1256 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 ALDH1L2Q3SY69 923 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 VPS53Q5VIR6 699 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 ZCRB1Q8TBF4 217 aaKnown RBP5.31□□□□□ -1.56
SCN3A-208ENST00000638473 ACSBG1Q96GR2 724 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 EDC4Q6P2E9 1401 aaKnown RBP5.31□□□□□ -1.56
SCN3A-208ENST00000638473 PUS7Q96PZ0 661 aaKnown RBP5.31□□□□□ -1.56
SCN3A-208ENST00000638473 PRDM15P57071 1507 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-208ENST00000638473 MAP3K4Q9Y6R4 1608 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 CDC45O75419 566 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 ZKSCAN1P17029 563 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-208ENST00000638473 AKAP17AQ02040 695 aaKnown RBP5.31□□□□□ -1.56
SCN3A-208ENST00000638473 RNF20Q5VTR2 975 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 NFXL1Q6ZNB6 911 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 PLEKHH1Q9ULM0 1364 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 ERICH2A1L162 156 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 GZF1Q9H116 711 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-208ENST00000638473 POLKQ9UBT6 870 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 PARD3Q8TEW0 1356 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 HOXC9P31274 260 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 RARSP54136 660 aaKnown RBP5.31□□□□□ -1.56
SCN3A-208ENST00000638473 DRC7Q8IY82 874 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 FMNL2Q96PY5 1086 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 MBIPQ9NS73 344 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 QRICH2Q9H0J4 1663 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 TRDNQ13061 729 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 ZNF652Q9Y2D9 606 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 NLRP1Q9C000 1473 aa5.31□□□□□ -1.56
SCN3A-208ENST00000638473 PLEKHG1Q9ULL1 1385 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 MYOM2P54296 1465 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 PHF14O94880 888 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 CCDC85AQ96PX6 553 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-208ENST00000638473 TBC1D2BQ9UPU7 963 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 TRPM1Q7Z4N2 1603 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 MPHOSPH8Q99549 860 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 SPINK5Q9NQ38 1064 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-208ENST00000638473 ORAI2Q96SN7 254 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 HYPKQ9NX55 129 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 SYNMO15061 1565 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 NPHP4O75161 1426 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-208ENST00000638473 SRGAP3O43295 1099 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 MAP3K2Q9Y2U5 619 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 ABCA6Q8N139 1617 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 F6X3S4 739 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 DNTTIP2Q5QJE6 756 aaKnown RBP5.3□□□□□ -1.56
SCN3A-208ENST00000638473 AEBP1Q8IUX7 1158 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 SSH1Q8WYL5 1049 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 CTDP1Q9Y5B0 961 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-208ENST00000638473 FLT4P35916 1363 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 FOXD4L6Q3SYB3 417 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-208ENST00000638473 AKAP4Q5JQC9 854 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 FOXD4L3Q6VB84 417 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-208ENST00000638473 AACSQ86V21 672 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 CHD1LQ86WJ1 897 aa5.3□□□□□ -1.56
SCN3A-208ENST00000638473 MARCH6O60337 910 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 KIF3AQ9Y496 699 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 RNF17Q9BXT8 1623 aaKnown RBP5.29□□□□□ -1.56
SCN3A-208ENST00000638473 GCP02774 474 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 LARP1Q6PKG0 1096 aaKnown RBP5.29□□□□□ -1.56
SCN3A-208ENST00000638473 RASSF8Q8NHQ8 419 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 GNL3LQ9NVN8 582 aaKnown RBP5.29□□□□□ -1.56
SCN3A-208ENST00000638473 FOSBP53539 338 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 PTPRCP08575 1304 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 MCTP1Q6DN14 999 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 C22orf23Q9BZE7 217 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 HIP1O00291 1037 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 MTHFSDQ2M296 383 aaKnown RBP5.29□□□□□ -1.56
SCN3A-208ENST00000638473 PPRC1Q5VV67 1664 aaKnown RBP5.29□□□□□ -1.56
SCN3A-208ENST00000638473 PIK3C2GO75747 1445 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 POLR3AO14802 1390 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-208ENST00000638473 TRIM29Q14134 588 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 SYAP1Q96A49 352 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-208ENST00000638473 METP08581 1390 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 IGHMBP2P38935 993 aaKnown RBP5.29□□□□□ -1.56
SCN3A-208ENST00000638473 C20orf194Q5TEA3 1177 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 BTG4Q9NY30 223 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 GLI2P10070 1586 aa5.29□□□□□ -1.56
SCN3A-208ENST00000638473 ZC3H13Q5T200 1668 aaKnown RBP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 STK11IPQ8N1F8 1099 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 IP6K1Q92551 441 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 IL2RBP14784 551 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 CHMP4CQ96CF2 233 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 AK7Q96M32 723 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 INO80Q9ULG1 1556 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 DHX16O60231 1041 aaKnown RBP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 KDM4AO75164 1064 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 FKBP4Q02790 459 aaKnown RBP eCLIP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 SF3A1Q15459 793 aaKnown RBP5.28□□□□□ -1.56
SCN3A-208ENST00000638473 PTPRTO14522 1441 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 IL16Q14005 1332 aa5.28□□□□□ -1.56
SCN3A-208ENST00000638473 NUTM1Q86Y26 1132 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms