RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 RPAP2Q8IXW5 612 aaPredicted RBP12.43□□□□□ -0.42
SMARCA2-265ENST00000638139 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
SMARCA2-265ENST00000638139 KLHL40Q2TBA0 621 aa12.43□□□□□ -0.42
SMARCA2-265ENST00000638139 SMARCA5O60264 1052 aaPredicted RBP12.42□□□□□ -0.42
SMARCA2-265ENST00000638139 SDSP20132 328 aa12.42□□□□□ -0.42
SMARCA2-265ENST00000638139 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
SMARCA2-265ENST00000638139 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
SMARCA2-265ENST00000638139 DDX49Q9Y6V7 483 aaKnown RBP12.42□□□□□ -0.42
SMARCA2-265ENST00000638139 CHL1O00533 1208 aa12.42□□□□□ -0.42
SMARCA2-265ENST00000638139 RTL1A6NKG5 1358 aa12.42□□□□□ -0.42
SMARCA2-265ENST00000638139 MSH6P52701 1360 aa12.42□□□□□ -0.42
SMARCA2-265ENST00000638139 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
SMARCA2-265ENST00000638139 SULT6B1Q6IMI4 303 aa12.41□□□□□ -0.42
SMARCA2-265ENST00000638139 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
SMARCA2-265ENST00000638139 IBTKQ9P2D0 1353 aaPredicted RBP12.41□□□□□ -0.42
SMARCA2-265ENST00000638139 APBB1O00213 710 aa12.4□□□□□ -0.42
SMARCA2-265ENST00000638139 NUCB2P80303 420 aa12.4□□□□□ -0.42
SMARCA2-265ENST00000638139 MCM10Q7L590 875 aa12.4□□□□□ -0.42
SMARCA2-265ENST00000638139 MEIS3Q99687 375 aa12.4□□□□□ -0.42
SMARCA2-265ENST00000638139 KIAA0232Q92628 1395 aa12.4□□□□□ -0.42
SMARCA2-265ENST00000638139 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
SMARCA2-265ENST00000638139 MCTP1Q6DN14 999 aa12.4□□□□□ -0.42
SMARCA2-265ENST00000638139 PPP6R1Q9UPN7 881 aa12.4□□□□□ -0.42
SMARCA2-265ENST00000638139 AGLP35573 1532 aa12.39□□□□□ -0.43
SMARCA2-265ENST00000638139 PTPRCP08575 1304 aa12.39□□□□□ -0.43
SMARCA2-265ENST00000638139 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
SMARCA2-265ENST00000638139 NASPP49321 788 aaPredicted RBP12.39□□□□□ -0.43
SMARCA2-265ENST00000638139 PKP1Q13835 747 aa12.39□□□□□ -0.43
SMARCA2-265ENST00000638139 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
SMARCA2-265ENST00000638139 CCDC173Q0VFZ6 552 aa12.39□□□□□ -0.43
SMARCA2-265ENST00000638139 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
SMARCA2-265ENST00000638139 LMBRD1Q9NUN5 540 aa12.38□□□□□ -0.43
SMARCA2-265ENST00000638139 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 CWC22Q9HCG8 908 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 TECPR2O15040 1411 aa12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 PEAK1Q9H792 1746 aa12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 ST18O60284 1047 aa12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 ZNF445P59923 1031 aa12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 ZGPATQ8N5A5 531 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 CRB1P82279 1406 aa12.37□□□□□ -0.43
SMARCA2-265ENST00000638139 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
SMARCA2-265ENST00000638139 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
SMARCA2-265ENST00000638139 REC8O95072 547 aa12.36□□□□□ -0.43
SMARCA2-265ENST00000638139 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
SMARCA2-265ENST00000638139 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
SMARCA2-265ENST00000638139 TSPOAP1O95153 1857 aa12.36□□□□□ -0.43
SMARCA2-265ENST00000638139 ERC2O15083 957 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 MLECQ14165 292 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 ZDHHC9Q9Y397 364 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 G2E3Q7L622 706 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 MIS18AQ9NYP9 233 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
SMARCA2-265ENST00000638139 HMMRO75330 724 aa12.34□□□□□ -0.43
SMARCA2-265ENST00000638139 OSBPL3Q9H4L5 887 aa12.34□□□□□ -0.43
SMARCA2-265ENST00000638139 NALCNQ8IZF0 1738 aa12.34□□□□□ -0.43
SMARCA2-265ENST00000638139 PDE1AP54750 535 aa12.34□□□□□ -0.43
SMARCA2-265ENST00000638139 ANP32BQ92688 251 aaKnown RBP12.34□□□□□ -0.43
SMARCA2-265ENST00000638139 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
SMARCA2-265ENST00000638139 F6X3S4 739 aa12.34□□□□□ -0.43
SMARCA2-265ENST00000638139 ACEP12821 1306 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 PRPF40AO75400 957 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 FAM69CQ0P6D2 419 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 SLC4A10Q6U841 1118 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 RIMS1Q86UR5 1692 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 TOPAZ1Q8N9V7 1692 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 ROBO2Q9HCK4 1378 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 FOXO3O43524 673 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 RBSNQ9H1K0 784 aa12.33□□□□□ -0.44
SMARCA2-265ENST00000638139 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.32□□□□□ -0.44
SMARCA2-265ENST00000638139 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
SMARCA2-265ENST00000638139 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
SMARCA2-265ENST00000638139 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
SMARCA2-265ENST00000638139 FMN2Q9NZ56 1722 aa12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 TSPYL4Q9UJ04 414 aa12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 MAP3K19Q56UN5 1328 aa12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 SALL3Q9BXA9 1300 aa12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 NEK4P51957 841 aa12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 MTHFSDQ2M296 383 aaKnown RBP12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 TSHZ3Q63HK5 1081 aa12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 EXOC6BQ9Y2D4 811 aa12.31□□□□□ -0.44
SMARCA2-265ENST00000638139 DIP2BQ9P265 1576 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 USP6P35125 1406 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 SOX12O15370 315 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 GNAI2P04899 355 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
SMARCA2-265ENST00000638139 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
SMARCA2-265ENST00000638139 CYB5RLQ6IPT4 315 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms