RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 FANCIQ9NVI1 1328 aa27.43■■□□□ 1.98
CLN8-213ENST00000637156 NUTM2BA6NNL0 878 aaPredicted RBP27.42■■□□□ 1.98
CLN8-213ENST00000637156 NUTM2EB1AL46 878 aaPredicted RBP27.42■■□□□ 1.98
CLN8-213ENST00000637156 HTATSF1O43719 755 aaKnown RBP27.42■■□□□ 1.98
CLN8-213ENST00000637156 NUTM2AQ8IVF1 878 aaPredicted RBP27.42■■□□□ 1.98
CLN8-213ENST00000637156 RTF1Q92541 710 aaKnown RBP27.42■■□□□ 1.98
CLN8-213ENST00000637156 LAS1LQ9Y4W2 734 aaKnown RBP27.42■■□□□ 1.98
CLN8-213ENST00000637156 RAPGEF4Q8WZA2 1011 aa27.41■■□□□ 1.98
CLN8-213ENST00000637156 CFAP44Q96MT7 982 aa27.41■■□□□ 1.98
CLN8-213ENST00000637156 IFT57Q9NWB7 429 aa27.4■■□□□ 1.98
CLN8-213ENST00000637156 IL17REQ8NFR9 667 aa27.4■■□□□ 1.98
CLN8-213ENST00000637156 GNAI1P63096 354 aa27.39■■□□□ 1.98
CLN8-213ENST00000637156 CARD10Q9BWT7 1032 aa27.39■■□□□ 1.98
CLN8-213ENST00000637156 JCADQ9P266 1359 aa27.38■■□□□ 1.97
CLN8-213ENST00000637156 TATP17735 454 aaPredicted RBP27.38■■□□□ 1.97
CLN8-213ENST00000637156 FAM208AQ9UK61 1670 aaKnown RBP27.37■■□□□ 1.97
CLN8-213ENST00000637156 EXOSC9Q06265 439 aaKnown RBP27.37■■□□□ 1.97
CLN8-213ENST00000637156 ZNF530Q6P9A1 599 aaPredicted RBP27.37■■□□□ 1.97
CLN8-213ENST00000637156 MAP3K5Q99683 1374 aa27.37■■□□□ 1.97
CLN8-213ENST00000637156 HSPA1LP34931 641 aa27.36■■□□□ 1.97
CLN8-213ENST00000637156 FKBP8Q14318 412 aa27.36■■□□□ 1.97
CLN8-213ENST00000637156 AKAP4Q5JQC9 854 aa27.36■■□□□ 1.97
CLN8-213ENST00000637156 MBIPQ9NS73 344 aa27.36■■□□□ 1.97
CLN8-213ENST00000637156 CRB1P82279 1406 aa27.36■■□□□ 1.97
CLN8-213ENST00000637156 CHL1O00533 1208 aa27.35■■□□□ 1.97
CLN8-213ENST00000637156 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.35■■□□□ 1.97
CLN8-213ENST00000637156 MEGF6O75095 1541 aa27.35■■□□□ 1.97
CLN8-213ENST00000637156 IRX6P78412 446 aaPredicted RBP27.34■■□□□ 1.97
CLN8-213ENST00000637156 LGR6Q9HBX8 967 aa27.34■■□□□ 1.97
CLN8-213ENST00000637156 NEFLP07196 543 aa27.33■■□□□ 1.97
CLN8-213ENST00000637156 COL14A1Q05707 1796 aaKnown RBP27.33■■□□□ 1.97
CLN8-213ENST00000637156 USP35Q9P2H5 1018 aa27.32■■□□□ 1.96
CLN8-213ENST00000637156 RRP1P56182 461 aaKnown RBP27.31■■□□□ 1.96
CLN8-213ENST00000637156 C1orf141Q5JVX7 400 aa27.31■■□□□ 1.96
CLN8-213ENST00000637156 MIS18AQ9NYP9 233 aa27.31■■□□□ 1.96
CLN8-213ENST00000637156 SPG7Q9UQ90 795 aa27.31■■□□□ 1.96
CLN8-213ENST00000637156 BCAR3O75815 825 aa27.3■■□□□ 1.96
CLN8-213ENST00000637156 MPRIPQ6WCQ1 1025 aa27.3■■□□□ 1.96
CLN8-213ENST00000637156 CEMIPQ8WUJ3 1361 aa27.29■■□□□ 1.96
CLN8-213ENST00000637156 RARSP54136 660 aaKnown RBP27.29■■□□□ 1.96
CLN8-213ENST00000637156 CT47B1P0C2W7 299 aaPredicted RBP27.28■■□□□ 1.96
CLN8-213ENST00000637156 IL2RBP14784 551 aa27.28■■□□□ 1.96
CLN8-213ENST00000637156 PLEKHG2Q9H7P9 1386 aa27.28■■□□□ 1.96
CLN8-213ENST00000637156 PLIN1O60240 522 aa27.27■■□□□ 1.96
CLN8-213ENST00000637156 PHKG2P15735 406 aa27.27■■□□□ 1.96
CLN8-213ENST00000637156 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
CLN8-213ENST00000637156 CYP27B1O15528 508 aa27.26■■□□□ 1.95
CLN8-213ENST00000637156 RNMTO43148 476 aaKnown RBP27.26■■□□□ 1.95
CLN8-213ENST00000637156 TSPYL6Q8N831 410 aa27.26■■□□□ 1.95
CLN8-213ENST00000637156 TAF7Q15545 349 aaPredicted RBP27.25■■□□□ 1.95
CLN8-213ENST00000637156 C8orf58Q8NAV2 365 aa27.25■■□□□ 1.95
CLN8-213ENST00000637156 OVOS2A0A0G2JMS6 1433 aa27.25■■□□□ 1.95
CLN8-213ENST00000637156 IFNL2Q8IZJ0 200 aa27.25■■□□□ 1.95
CLN8-213ENST00000637156 ZCRB1Q8TBF4 217 aaKnown RBP27.25■■□□□ 1.95
CLN8-213ENST00000637156 VAMP4O75379 141 aa27.24■■□□□ 1.95
CLN8-213ENST00000637156 TSPYL4Q9UJ04 414 aa27.23■■□□□ 1.95
CLN8-213ENST00000637156 ELL2O00472 640 aaPredicted RBP27.23■■□□□ 1.95
CLN8-213ENST00000637156 SLIT2O94813 1529 aa27.22■■□□□ 1.95
CLN8-213ENST00000637156 NGLY1Q96IV0 654 aa27.21■■□□□ 1.95
CLN8-213ENST00000637156 C8orf37Q96NL8 207 aa27.21■■□□□ 1.95
CLN8-213ENST00000637156 KRT24Q2M2I5 525 aa27.21■■□□□ 1.95
CLN8-213ENST00000637156 BABAM1Q9NWV8 329 aa27.21■■□□□ 1.95
CLN8-213ENST00000637156 BCL2L13Q9BXK5 485 aa27.2■■□□□ 1.94
CLN8-213ENST00000637156 TWISTNBQ3B726 338 aaPredicted RBP27.19■■□□□ 1.94
CLN8-213ENST00000637156 SSH1Q8WYL5 1049 aa27.19■■□□□ 1.94
CLN8-213ENST00000637156 SPATA31A1Q5TZJ5 1347 aa27.18■■□□□ 1.94
CLN8-213ENST00000637156 TEFQ10587 303 aa27.18■■□□□ 1.94
CLN8-213ENST00000637156 UNC5CLQ8IV45 518 aa27.18■■□□□ 1.94
CLN8-213ENST00000637156 FNBP4Q8N3X1 1017 aaPredicted RBP27.18■■□□□ 1.94
CLN8-213ENST00000637156 PLCH1Q4KWH8 1693 aa27.17■■□□□ 1.94
CLN8-213ENST00000637156 LRRC37A3O60309 1634 aa27.17■■□□□ 1.94
CLN8-213ENST00000637156 LRP6O75581 1613 aa27.17■■□□□ 1.94
CLN8-213ENST00000637156 DCAF5Q96JK2 942 aa27.17■■□□□ 1.94
CLN8-213ENST00000637156 C20orf194Q5TEA3 1177 aa27.16■■□□□ 1.94
CLN8-213ENST00000637156 DDX54Q8TDD1 881 aaKnown RBP27.16■■□□□ 1.94
CLN8-213ENST00000637156 ZNF428Q96B54 188 aa27.16■■□□□ 1.94
CLN8-213ENST00000637156 PCDH11XQ9BZA7 1347 aa27.16■■□□□ 1.94
CLN8-213ENST00000637156 PCDH11YQ9BZA8 1340 aa27.16■■□□□ 1.94
CLN8-213ENST00000637156 KDM6AO15550 1401 aaPredicted RBP27.15■■□□□ 1.94
CLN8-213ENST00000637156 PKD1L3Q7Z443 1732 aa27.15■■□□□ 1.94
CLN8-213ENST00000637156 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.15■■□□□ 1.94
CLN8-213ENST00000637156 BCL9LQ86UU0 1499 aa27.14■■□□□ 1.94
CLN8-213ENST00000637156 SPATA31A5Q5VU36 1347 aa27.14■■□□□ 1.94
CLN8-213ENST00000637156 SPATA31A7Q8IWB4 1347 aa27.14■■□□□ 1.94
CLN8-213ENST00000637156 DISP2A7MBM2 1401 aa27.14■■□□□ 1.94
CLN8-213ENST00000637156 HSP90AB1P08238 724 aaKnown RBP27.14■■□□□ 1.94
CLN8-213ENST00000637156 THRAP3Q9Y2W1 955 aaKnown RBP27.14■■□□□ 1.94
CLN8-213ENST00000637156 BTBD11A6QL63 1104 aa27.13■■□□□ 1.93
CLN8-213ENST00000637156 NKX1-1Q15270 411 aaPredicted RBP27.13■■□□□ 1.93
CLN8-213ENST00000637156 ALDH1L2Q3SY69 923 aa27.13■■□□□ 1.93
CLN8-213ENST00000637156 ERICH6BQ5W0A0 696 aa27.13■■□□□ 1.93
CLN8-213ENST00000637156 NRAPQ86VF7 1730 aa27.13■■□□□ 1.93
CLN8-213ENST00000637156 NFATC2IPQ8NCF5 419 aa27.13■■□□□ 1.93
CLN8-213ENST00000637156 SMC4Q9NTJ3 1288 aa27.13■■□□□ 1.93
CLN8-213ENST00000637156 PARP4Q9UKK3 1724 aaKnown RBP27.12■■□□□ 1.93
CLN8-213ENST00000637156 KCNQ3O43525 872 aa27.12■■□□□ 1.93
CLN8-213ENST00000637156 FRAT1Q92837 279 aaPredicted RBP27.12■■□□□ 1.93
CLN8-213ENST00000637156 SLC52A2Q9HAB3 445 aa27.12■■□□□ 1.93
CLN8-213ENST00000637156 CCDC9Q9Y3X0 531 aaKnown RBP27.1■■□□□ 1.93
CLN8-213ENST00000637156 ADAMTS7Q9UKP4 1686 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms