RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 MCM10Q7L590 875 aa15.2■□□□□ 0.02
CLN8-212ENST00000637083 CRB1P82279 1406 aa15.19■□□□□ 0.02
CLN8-212ENST00000637083 RGPD8O14715 1765 aaPredicted RBP15.19■□□□□ 0.02
CLN8-212ENST00000637083 MTHFSDQ2M296 383 aaKnown RBP15.19■□□□□ 0.02
CLN8-212ENST00000637083 ANKRD45Q5TZF3 282 aa15.19■□□□□ 0.02
CLN8-212ENST00000637083 EYA1Q99502 592 aa15.19■□□□□ 0.02
CLN8-212ENST00000637083 LNPKQ9C0E8 428 aa15.19■□□□□ 0.02
CLN8-212ENST00000637083 SOS1Q07889 1333 aaPredicted RBP15.18■□□□□ 0.02
CLN8-212ENST00000637083 NFKBIBQ15653 356 aa15.18■□□□□ 0.02
CLN8-212ENST00000637083 BMP2KLQ5H9B9 411 aa15.18■□□□□ 0.02
CLN8-212ENST00000637083 ABTB2Q8N961 1025 aa15.18■□□□□ 0.02
CLN8-212ENST00000637083 RBM33Q96EV2 1170 aaKnown RBP15.18■□□□□ 0.02
CLN8-212ENST00000637083 C22orf23Q9BZE7 217 aa15.18■□□□□ 0.02
CLN8-212ENST00000637083 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
CLN8-212ENST00000637083 RPAP2Q8IXW5 612 aaPredicted RBP15.17■□□□□ 0.02
CLN8-212ENST00000637083 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
CLN8-212ENST00000637083 ZNF142P52746 1687 aaPredicted RBP15.17■□□□□ 0.02
CLN8-212ENST00000637083 KDM4FA0A1W2PPD8 638 aa15.17■□□□□ 0.02
CLN8-212ENST00000637083 NUTM2GQ5VZR2 741 aa15.17■□□□□ 0.02
CLN8-212ENST00000637083 BABAM1Q9NWV8 329 aa15.17■□□□□ 0.02
CLN8-212ENST00000637083 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
CLN8-212ENST00000637083 HOXC9P31274 260 aa15.16■□□□□ 0.02
CLN8-212ENST00000637083 CHD2O14647 1828 aaKnown RBP15.16■□□□□ 0.02
CLN8-212ENST00000637083 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
CLN8-212ENST00000637083 MFAP1P55081 439 aaKnown RBP15.15■□□□□ 0.02
CLN8-212ENST00000637083 C1orf115Q9H7X2 142 aa15.15■□□□□ 0.02
CLN8-212ENST00000637083 STK31Q9BXU1 1019 aa15.14■□□□□ 0.01
CLN8-212ENST00000637083 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
CLN8-212ENST00000637083 CCT4P50991 539 aaKnown RBP15.13■□□□□ 0.01
CLN8-212ENST00000637083 ANKRD44Q8N8A2 993 aa15.13■□□□□ 0.01
CLN8-212ENST00000637083 KCNH5Q8NCM2 988 aa15.13■□□□□ 0.01
CLN8-212ENST00000637083 DCTPP1Q9H773 170 aa15.13■□□□□ 0.01
CLN8-212ENST00000637083 FOXO3O43524 673 aa15.12■□□□□ 0.01
CLN8-212ENST00000637083 SIRT2Q8IXJ6 389 aa15.12■□□□□ 0.01
CLN8-212ENST00000637083 CHMP4AQ9BY43 222 aa15.12■□□□□ 0.01
CLN8-212ENST00000637083 ADGRL3Q9HAR2 1447 aa15.12■□□□□ 0.01
CLN8-212ENST00000637083 HMMRO75330 724 aa15.12■□□□□ 0.01
CLN8-212ENST00000637083 C14orf37Q86TY3 774 aa15.12■□□□□ 0.01
CLN8-212ENST00000637083 RGS12O14924 1447 aa15.11■□□□□ 0.01
CLN8-212ENST00000637083 KRT24Q2M2I5 525 aa15.11■□□□□ 0.01
CLN8-212ENST00000637083 CCDC30Q5VVM6 783 aa15.11■□□□□ 0.01
CLN8-212ENST00000637083 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
CLN8-212ENST00000637083 RBM25P49756 843 aaKnown RBP15.1■□□□□ 0.01
CLN8-212ENST00000637083 TBC1D2Q9BYX2 928 aa15.1■□□□□ 0.01
CLN8-212ENST00000637083 MARF1Q9Y4F3 1742 aaKnown RBP15.1■□□□□ 0.01
CLN8-212ENST00000637083 PSME1Q06323 249 aa15.1■□□□□ 0.01
CLN8-212ENST00000637083 ESCO1Q5FWF5 840 aa15.1■□□□□ 0.01
CLN8-212ENST00000637083 IP6K1Q92551 441 aa15.1■□□□□ 0.01
CLN8-212ENST00000637083 LRRC37A3O60309 1634 aa15.1■□□□□ 0.01
CLN8-212ENST00000637083 ADAMTSL3P82987 1691 aa15.09■□□□□ 0.01
CLN8-212ENST00000637083 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
CLN8-212ENST00000637083 HSCBQ8IWL3 235 aa15.09■□□□□ 0.01
CLN8-212ENST00000637083 MIS18AQ9NYP9 233 aa15.09■□□□□ 0.01
CLN8-212ENST00000637083 SETD1BQ9UPS6 1966 aaKnown RBP15.08■□□□□ 0.01
CLN8-212ENST00000637083 MSH6P52701 1360 aa15.08■□□□□ 0
CLN8-212ENST00000637083 CEP85Q6P2H3 762 aa15.08■□□□□ 0
CLN8-212ENST00000637083 NWD1Q149M9 1564 aa15.08■□□□□ 0
CLN8-212ENST00000637083 NPHP4O75161 1426 aaPredicted RBP15.08■□□□□ 0
CLN8-212ENST00000637083 CDC45O75419 566 aa15.07■□□□□ 0
CLN8-212ENST00000637083 GSE1Q14687 1217 aa15.07■□□□□ 0
CLN8-212ENST00000637083 ATP10DQ9P241 1426 aa15.07■□□□□ 0
CLN8-212ENST00000637083 LTV1Q96GA3 475 aaPredicted RBP15.06■□□□□ 0
CLN8-212ENST00000637083 GNAI3P08754 354 aa15.05■□□□□ 0
CLN8-212ENST00000637083 SNX21Q969T3 373 aa15.05■□□□□ 0
CLN8-212ENST00000637083 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ 0
CLN8-212ENST00000637083 FRAT2O75474 233 aaPredicted RBP15.05■□□□□ -0
CLN8-212ENST00000637083 PLEKHM2Q8IWE5 1019 aa15.05■□□□□ -0
CLN8-212ENST00000637083 ORAI2Q96SN7 254 aa15.05■□□□□ -0
CLN8-212ENST00000637083 ANTXR1Q9H6X2 564 aa15.05■□□□□ -0
CLN8-212ENST00000637083 LTN1O94822 1766 aa15.04■□□□□ -0
CLN8-212ENST00000637083 GNAI2P04899 355 aa15.04■□□□□ -0
CLN8-212ENST00000637083 CASC1Q6TDU7 716 aa15.04■□□□□ -0
CLN8-212ENST00000637083 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
CLN8-212ENST00000637083 IL17REQ8NFR9 667 aa15.04■□□□□ -0
CLN8-212ENST00000637083 MEIS3Q99687 375 aa15.04■□□□□ -0
CLN8-212ENST00000637083 NFAT5O94916 1531 aa15.04■□□□□ -0
CLN8-212ENST00000637083 PHRF1Q9P1Y6 1649 aaKnown RBP15.04■□□□□ -0
CLN8-212ENST00000637083 FLIIQ13045 1269 aa15.04■□□□□ -0
CLN8-212ENST00000637083 TBC1D9Q6ZT07 1266 aa15.04■□□□□ -0
CLN8-212ENST00000637083 TTC22Q5TAA0 569 aa15.03■□□□□ -0
CLN8-212ENST00000637083 CHMP5Q9NZZ3 219 aa15.03■□□□□ -0
CLN8-212ENST00000637083 HOXB7P09629 217 aa15.02■□□□□ -0
CLN8-212ENST00000637083 FKBP5Q13451 457 aaPredicted RBP15.02■□□□□ -0
CLN8-212ENST00000637083 AMOTQ4VCS5 1084 aa15.02■□□□□ -0
CLN8-212ENST00000637083 G2E3Q7L622 706 aa15.02■□□□□ -0
CLN8-212ENST00000637083 PXDNLA1KZ92 1463 aa15.02■□□□□ -0
CLN8-212ENST00000637083 CACNA1FO60840 1977 aa15.02□□□□□ -0.01
CLN8-212ENST00000637083 PLEKHO1Q53GL0 409 aaPredicted RBP15.02□□□□□ -0.01
CLN8-212ENST00000637083 PROSER2Q86WR7 435 aaPredicted RBP15.02□□□□□ -0.01
CLN8-212ENST00000637083 FAM208AQ9UK61 1670 aaKnown RBP15.01□□□□□ -0.01
CLN8-212ENST00000637083 CEMIPQ8WUJ3 1361 aa15.01□□□□□ -0.01
CLN8-212ENST00000637083 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
CLN8-212ENST00000637083 NBPF6Q5VWK0 638 aa15□□□□□ -0.01
CLN8-212ENST00000637083 NBPF4Q96M43 638 aa15□□□□□ -0.01
CLN8-212ENST00000637083 F6X3S4 739 aa15□□□□□ -0.01
CLN8-212ENST00000637083 XPCQ01831 940 aaPredicted RBP15□□□□□ -0.01
CLN8-212ENST00000637083 AKAP4Q5JQC9 854 aa15□□□□□ -0.01
CLN8-212ENST00000637083 SLIT3O75094 1523 aa14.99□□□□□ -0.01
CLN8-212ENST00000637083 GCP02774 474 aa14.99□□□□□ -0.01
CLN8-212ENST00000637083 GSPT1P15170 499 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms