RNA–Protein interactions for RNA: ENST00000636710.1

TCF4-279, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 161 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-279ENST00000636710 USP31Q70CQ4 1352 aa9.4□□□□□ -0.9
TCF4-279ENST00000636710 DDX54Q8TDD1 881 aaKnown RBP9.4□□□□□ -0.9
TCF4-279ENST00000636710 C10orf71Q711Q0 1435 aa9.39□□□□□ -0.91
TCF4-279ENST00000636710 CICQ96RK0 1608 aaPredicted RBP9.39□□□□□ -0.91
TCF4-279ENST00000636710 CENPJQ9HC77 1338 aaPredicted RBP9.39□□□□□ -0.91
TCF4-279ENST00000636710 TGFB2P61812 414 aa9.39□□□□□ -0.91
TCF4-279ENST00000636710 ANKRD24Q8TF21 1146 aa9.39□□□□□ -0.91
TCF4-279ENST00000636710 NFAT5O94916 1531 aa9.39□□□□□ -0.91
TCF4-279ENST00000636710 AKAP12Q02952 1782 aa9.39□□□□□ -0.91
TCF4-279ENST00000636710 WNK3Q9BYP7 1800 aa9.38□□□□□ -0.91
TCF4-279ENST00000636710 SOX12O15370 315 aa9.38□□□□□ -0.91
TCF4-279ENST00000636710 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
TCF4-279ENST00000636710 SYTL4Q96C24 671 aaPredicted RBP9.38□□□□□ -0.91
TCF4-279ENST00000636710 BTAF1O14981 1849 aa9.38□□□□□ -0.91
TCF4-279ENST00000636710 USP47Q96K76 1375 aa9.37□□□□□ -0.91
TCF4-279ENST00000636710 NBPF1Q3BBV0 1214 aa9.37□□□□□ -0.91
TCF4-279ENST00000636710 AMIGO3Q86WK7 504 aa9.37□□□□□ -0.91
TCF4-279ENST00000636710 SMC1BQ8NDV3 1235 aa9.37□□□□□ -0.91
TCF4-279ENST00000636710 ZCRB1Q8TBF4 217 aaKnown RBP9.36□□□□□ -0.91
TCF4-279ENST00000636710 PLEKHG2Q9H7P9 1386 aa9.36□□□□□ -0.91
TCF4-279ENST00000636710 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
TCF4-279ENST00000636710 KDM2BQ8NHM5 1336 aa9.35□□□□□ -0.91
TCF4-279ENST00000636710 SSFA2P28290 1259 aa9.35□□□□□ -0.91
TCF4-279ENST00000636710 C9orf131Q5VYM1 1079 aa9.35□□□□□ -0.91
TCF4-279ENST00000636710 ARHGAP27Q6ZUM4 889 aa9.35□□□□□ -0.91
TCF4-279ENST00000636710 IP6K1Q92551 441 aa9.35□□□□□ -0.91
TCF4-279ENST00000636710 WDR90Q96KV7 1748 aa9.35□□□□□ -0.91
TCF4-279ENST00000636710 PRDM10Q9NQV6 1147 aa9.35□□□□□ -0.91
TCF4-279ENST00000636710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.91
TCF4-279ENST00000636710 RRAGCQ9HB90 399 aa9.34□□□□□ -0.91
TCF4-279ENST00000636710 BCS1LQ9Y276 419 aa9.34□□□□□ -0.91
TCF4-279ENST00000636710 PXDNLA1KZ92 1463 aa9.34□□□□□ -0.91
TCF4-279ENST00000636710 EVC2Q86UK5 1308 aa9.33□□□□□ -0.92
TCF4-279ENST00000636710 CGNL1Q0VF96 1302 aa9.32□□□□□ -0.92
TCF4-279ENST00000636710 A0A0G2JLW4 131 aa9.32□□□□□ -0.92
TCF4-279ENST00000636710 KCNA3P22001 575 aa9.32□□□□□ -0.92
TCF4-279ENST00000636710 RGS19P49795 217 aa9.32□□□□□ -0.92
TCF4-279ENST00000636710 AK7Q96M32 723 aa9.32□□□□□ -0.92
TCF4-279ENST00000636710 NSD3Q9BZ95 1437 aa9.31□□□□□ -0.92
TCF4-279ENST00000636710 LY75O60449 1722 aa9.31□□□□□ -0.92
TCF4-279ENST00000636710 SMARCC1Q92922 1105 aaPredicted RBP9.31□□□□□ -0.92
TCF4-279ENST00000636710 KTN1Q86UP2 1357 aaKnown RBP9.31□□□□□ -0.92
TCF4-279ENST00000636710 PALLDQ8WX93 1383 aa9.31□□□□□ -0.92
TCF4-279ENST00000636710 TUBGCP6Q96RT7 1819 aa9.31□□□□□ -0.92
TCF4-279ENST00000636710 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
TCF4-279ENST00000636710 FCHSD2O94868 740 aa9.3□□□□□ -0.92
TCF4-279ENST00000636710 MMP10P09238 476 aa9.3□□□□□ -0.92
TCF4-279ENST00000636710 DPEP1P16444 411 aa9.3□□□□□ -0.92
TCF4-279ENST00000636710 SMIM5Q71RC9 77 aa9.3□□□□□ -0.92
TCF4-279ENST00000636710 NLGN1Q8N2Q7 840 aa9.3□□□□□ -0.92
TCF4-279ENST00000636710 DCAF5Q96JK2 942 aa9.3□□□□□ -0.92
TCF4-279ENST00000636710 SBNO2Q9Y2G9 1366 aa9.29□□□□□ -0.92
TCF4-279ENST00000636710 VEGFAP15692 232 aaPredicted RBP9.29□□□□□ -0.92
TCF4-279ENST00000636710 NME9Q86XW9 330 aa9.29□□□□□ -0.92
TCF4-279ENST00000636710 KCPQ6ZWJ8 1503 aa9.29□□□□□ -0.92
TCF4-279ENST00000636710 FOXN1O15353 648 aa9.28□□□□□ -0.92
TCF4-279ENST00000636710 PHF14O94880 888 aa9.28□□□□□ -0.92
TCF4-279ENST00000636710 FAM161AQ3B820 660 aa9.28□□□□□ -0.92
TCF4-279ENST00000636710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.28□□□□□ -0.92
TCF4-279ENST00000636710 PIM2Q9P1W9 311 aa9.28□□□□□ -0.92
TCF4-279ENST00000636710 GLTPD2A6NH11 291 aa9.27□□□□□ -0.93
TCF4-279ENST00000636710 CTCFP49711 727 aaPredicted RBP9.27□□□□□ -0.93
TCF4-279ENST00000636710 MPRIPQ6WCQ1 1025 aa9.27□□□□□ -0.93
TCF4-279ENST00000636710 LINC00116Q8NCU8 138 aa9.27□□□□□ -0.93
TCF4-279ENST00000636710 CREBZFQ9NS37 354 aa9.27□□□□□ -0.93
TCF4-279ENST00000636710 CCDC87Q9NVE4 849 aa9.27□□□□□ -0.93
TCF4-279ENST00000636710 RNF181Q9P0P0 153 aa9.27□□□□□ -0.93
TCF4-279ENST00000636710 MEGF6O75095 1541 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 LOC102724428A0A0B4J2F2 783 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 HOXC9P31274 260 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 SIK1P57059 783 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 TMF1P82094 1093 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 NKX1-1Q15270 411 aaPredicted RBP9.26□□□□□ -0.93
TCF4-279ENST00000636710 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
TCF4-279ENST00000636710 NBPF6Q5VWK0 638 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 PIGBQ92521 554 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 ABHD8Q96I13 439 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 NBPF4Q96M43 638 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 RGPD5Q99666 1765 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 QRICH2Q9H0J4 1663 aa9.26□□□□□ -0.93
TCF4-279ENST00000636710 KDM6AO15550 1401 aaPredicted RBP9.25□□□□□ -0.93
TCF4-279ENST00000636710 POTECB2RU33 542 aa9.25□□□□□ -0.93
TCF4-279ENST00000636710 CYP27B1O15528 508 aa9.25□□□□□ -0.93
TCF4-279ENST00000636710 MLLT1Q03111 559 aaPredicted RBP9.25□□□□□ -0.93
TCF4-279ENST00000636710 LTV1Q96GA3 475 aaPredicted RBP9.25□□□□□ -0.93
TCF4-279ENST00000636710 WBP1LQ9NX94 342 aa9.25□□□□□ -0.93
TCF4-279ENST00000636710 USP54Q70EL1 1684 aa9.25□□□□□ -0.93
TCF4-279ENST00000636710 CD163L1Q9NR16 1453 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 GNPATO15228 680 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 ADRA2BP18089 450 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 ITPK1Q13572 414 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 KIAA1210Q9ULL0 1709 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 MAP3K19Q56UN5 1328 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 PCDH11XQ9BZA7 1347 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 PCDH11YQ9BZA8 1340 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
TCF4-279ENST00000636710 GYS1P13807 737 aa9.23□□□□□ -0.93
TCF4-279ENST00000636710 RC3H1Q5TC82 1133 aaKnown RBP9.23□□□□□ -0.93
TCF4-279ENST00000636710 RAPGEF4Q8WZA2 1011 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms