RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 TPM1P09493 284 aa16.97■□□□□ 0.31
GABRB3-219ENST00000636466 PCDHB15Q9Y5E8 787 aa16.97■□□□□ 0.31
GABRB3-219ENST00000636466 LARP1BQ659C4 914 aaKnown RBP16.97■□□□□ 0.31
GABRB3-219ENST00000636466 CEP126Q9P2H0 1117 aa16.97■□□□□ 0.31
GABRB3-219ENST00000636466 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
GABRB3-219ENST00000636466 MBD3O95983 291 aa16.97■□□□□ 0.31
GABRB3-219ENST00000636466 CHRNA2Q15822 529 aa16.97■□□□□ 0.31
GABRB3-219ENST00000636466 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
GABRB3-219ENST00000636466 BICDL1Q6ZP65 573 aa16.97■□□□□ 0.31
GABRB3-219ENST00000636466 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
GABRB3-219ENST00000636466 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
GABRB3-219ENST00000636466 PDCP20941 246 aa16.96■□□□□ 0.31
GABRB3-219ENST00000636466 DDX11Q96FC9 970 aa16.96■□□□□ 0.31
GABRB3-219ENST00000636466 MX1P20591 662 aa16.96■□□□□ 0.31
GABRB3-219ENST00000636466 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.31
GABRB3-219ENST00000636466 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
GABRB3-219ENST00000636466 FAM135AQ9P2D6 1515 aa16.95■□□□□ 0.3
GABRB3-219ENST00000636466 PER1O15534 1290 aaPredicted RBP16.95■□□□□ 0.3
GABRB3-219ENST00000636466 KINO60870 393 aaKnown RBP16.95■□□□□ 0.3
GABRB3-219ENST00000636466 MPHOSPH8Q99549 860 aa16.95■□□□□ 0.3
GABRB3-219ENST00000636466 KRT24Q2M2I5 525 aa16.95■□□□□ 0.3
GABRB3-219ENST00000636466 HIP1O00291 1037 aa16.94■□□□□ 0.3
GABRB3-219ENST00000636466 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
GABRB3-219ENST00000636466 KCNH5Q8NCM2 988 aa16.94■□□□□ 0.3
GABRB3-219ENST00000636466 STK38Q15208 465 aa16.94■□□□□ 0.3
GABRB3-219ENST00000636466 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
GABRB3-219ENST00000636466 PDILTQ8N807 584 aa16.94■□□□□ 0.3
GABRB3-219ENST00000636466 IDH1O75874 414 aaKnown RBP16.93■□□□□ 0.3
GABRB3-219ENST00000636466 FLIIQ13045 1269 aa16.93■□□□□ 0.3
GABRB3-219ENST00000636466 CASTP20810 708 aaKnown RBP16.93■□□□□ 0.3
GABRB3-219ENST00000636466 ALDH1L2Q3SY69 923 aa16.93■□□□□ 0.3
GABRB3-219ENST00000636466 MYD88Q99836 296 aa16.93■□□□□ 0.3
GABRB3-219ENST00000636466 A0A0U1RQG5 324 aaPredicted RBP16.92■□□□□ 0.3
GABRB3-219ENST00000636466 ME1P48163 572 aa16.92■□□□□ 0.3
GABRB3-219ENST00000636466 SART3Q15020 963 aaKnown RBP16.92■□□□□ 0.3
GABRB3-219ENST00000636466 PDRG1Q9NUG6 133 aa16.92■□□□□ 0.3
GABRB3-219ENST00000636466 IPO7O95373 1038 aaKnown RBP16.92■□□□□ 0.3
GABRB3-219ENST00000636466 TTLL5Q6EMB2 1281 aa16.92■□□□□ 0.3
GABRB3-219ENST00000636466 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
GABRB3-219ENST00000636466 KIF1BPQ96EK5 621 aa16.92■□□□□ 0.3
GABRB3-219ENST00000636466 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
GABRB3-219ENST00000636466 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
GABRB3-219ENST00000636466 TSPY26PQ9H489 355 aa16.92■□□□□ 0.3
GABRB3-219ENST00000636466 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
GABRB3-219ENST00000636466 PPFIA3O75145 1194 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 RLBP1P12271 317 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 CEP89Q96ST8 783 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 IKQ13123 557 aaPredicted RBP16.91■□□□□ 0.3
GABRB3-219ENST00000636466 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 PHACTR3Q96KR7 559 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 HOOK1Q9UJC3 728 aaKnown RBP16.91■□□□□ 0.3
GABRB3-219ENST00000636466 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 ANKRD20A12PQ8NF67 263 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
GABRB3-219ENST00000636466 ABCF2Q9UG63 623 aa16.91■□□□□ 0.3
GABRB3-219ENST00000636466 CCDC83Q8IWF9 413 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 GRPEL1Q9HAV7 217 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
GABRB3-219ENST00000636466 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
GABRB3-219ENST00000636466 ATP2B2Q01814 1243 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 GOLGA6L1Q8N7Z2 621 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 TSPYL6Q8N831 410 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 PLEKHH1Q9ULM0 1364 aa16.9■□□□□ 0.3
GABRB3-219ENST00000636466 DNAAF4Q8WXU2 420 aa16.89■□□□□ 0.3
GABRB3-219ENST00000636466 RALGAPBQ86X10 1494 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 SMC2O95347 1197 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 TCEAL9Q9UHQ7 104 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 A2MP01023 1474 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 TPM2P07951 284 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 MEIS3Q99687 375 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 KRT28Q7Z3Y7 464 aa16.89■□□□□ 0.29
GABRB3-219ENST00000636466 CTDP1Q9Y5B0 961 aaPredicted RBP16.89■□□□□ 0.29
GABRB3-219ENST00000636466 PIP4K2AP48426 406 aaPredicted RBP16.88■□□□□ 0.29
GABRB3-219ENST00000636466 KRT85P78386 507 aa16.88■□□□□ 0.29
GABRB3-219ENST00000636466 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
GABRB3-219ENST00000636466 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
GABRB3-219ENST00000636466 GDPD2Q9HCC8 539 aa16.88■□□□□ 0.29
GABRB3-219ENST00000636466 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
GABRB3-219ENST00000636466 SSFA2P28290 1259 aa16.88■□□□□ 0.29
GABRB3-219ENST00000636466 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
GABRB3-219ENST00000636466 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
GABRB3-219ENST00000636466 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
GABRB3-219ENST00000636466 XBP1P17861 261 aa16.87■□□□□ 0.29
GABRB3-219ENST00000636466 GPTP24298 496 aa16.87■□□□□ 0.29
GABRB3-219ENST00000636466 SYCE3A1L190 88 aa16.87■□□□□ 0.29
GABRB3-219ENST00000636466 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.87■□□□□ 0.29
GABRB3-219ENST00000636466 A0A087WZG4 1122 aa16.86■□□□□ 0.29
GABRB3-219ENST00000636466 OLFM4Q6UX06 510 aa16.86■□□□□ 0.29
GABRB3-219ENST00000636466 CCDC82Q8N4S0 544 aa16.86■□□□□ 0.29
GABRB3-219ENST00000636466 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
GABRB3-219ENST00000636466 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
GABRB3-219ENST00000636466 CABLES1Q8TDN4 633 aa16.86■□□□□ 0.29
GABRB3-219ENST00000636466 TNMDQ9H2S6 317 aa16.86■□□□□ 0.29
GABRB3-219ENST00000636466 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms