RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 ABCA8O94911 1581 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 GNAT3A8MTJ3 354 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 NRDCO43847 1150 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 CCAR1Q8IX12 1150 aaKnown RBP17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 MARCH6O60337 910 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 DUSP27Q5VZP5 1158 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 UGGT1Q9NYU2 1555 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 ERC2O15083 957 aa17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 RBM6P78332 1123 aaKnown RBP17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 F6X3S4 739 aa17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 INTS3Q68E01 1043 aaKnown RBP17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 CPLX1O14810 134 aa17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 L1TD1Q5T7N2 865 aaKnown RBP17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
NEDD4L-238ENST00000635997 SCAF11Q99590 1463 aaKnown RBP17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 ZCCHC11Q5TAX3 1644 aaKnown RBP17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 GOLGA6L6A8MZA4 724 aa17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 SRGAP3O43295 1099 aa17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 AKAP17AQ02040 695 aaKnown RBP17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 TRDNQ13061 729 aa17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 LRRFIP1Q32MZ4 808 aaKnown RBP17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 VPS37CA5D8V6 355 aaPredicted RBP17.36■□□□□ 0.37
NEDD4L-238ENST00000635997 CNNM1Q9NRU3 951 aa17.35■□□□□ 0.37
NEDD4L-238ENST00000635997 CCNL1Q9UK58 526 aaPredicted RBP17.35■□□□□ 0.37
NEDD4L-238ENST00000635997 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
NEDD4L-238ENST00000635997 SYNE3Q6ZMZ3 975 aa17.35■□□□□ 0.37
NEDD4L-238ENST00000635997 TRIM37O94972 964 aa17.35■□□□□ 0.37
NEDD4L-238ENST00000635997 STK11IPQ8N1F8 1099 aa17.35■□□□□ 0.37
NEDD4L-238ENST00000635997 ANXA1P04083 346 aa17.34■□□□□ 0.37
NEDD4L-238ENST00000635997 RBM5P52756 815 aaKnown RBP eCLIP17.34■□□□□ 0.373e-7■■■■□ 25.8
NEDD4L-238ENST00000635997 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-238ENST00000635997 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
NEDD4L-238ENST00000635997 PTPRMP28827 1452 aa17.34■□□□□ 0.37
NEDD4L-238ENST00000635997 MVPQ14764 893 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-238ENST00000635997 RPGRQ92834 1020 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-238ENST00000635997 KIF3AQ9Y496 699 aa17.34■□□□□ 0.37
NEDD4L-238ENST00000635997 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
NEDD4L-238ENST00000635997 FAM196AQ6ZSG2 479 aa17.33■□□□□ 0.37
NEDD4L-238ENST00000635997 AMOTL1Q8IY63 956 aa17.33■□□□□ 0.37
NEDD4L-238ENST00000635997 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.37
NEDD4L-238ENST00000635997 MSNP26038 577 aaKnown RBP17.33■□□□□ 0.37
NEDD4L-238ENST00000635997 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.37
NEDD4L-238ENST00000635997 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.36
NEDD4L-238ENST00000635997 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
NEDD4L-238ENST00000635997 CFAP65Q6ZU64 1925 aaKnown RBP17.32■□□□□ 0.36
NEDD4L-238ENST00000635997 TCOF1Q13428 1488 aaKnown RBP17.32■□□□□ 0.36
NEDD4L-238ENST00000635997 SYAP1Q96A49 352 aaPredicted RBP17.32■□□□□ 0.36
NEDD4L-238ENST00000635997 WDHD1O75717 1129 aaPredicted RBP17.32■□□□□ 0.36
NEDD4L-238ENST00000635997 RNF20Q5VTR2 975 aa17.32■□□□□ 0.36
NEDD4L-238ENST00000635997 NLRP1Q9C000 1473 aa17.32■□□□□ 0.36
NEDD4L-238ENST00000635997 TTLL12Q14166 644 aaPredicted RBP17.31■□□□□ 0.36
NEDD4L-238ENST00000635997 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
NEDD4L-238ENST00000635997 CDC45O75419 566 aa17.31■□□□□ 0.36
NEDD4L-238ENST00000635997 NFKBIBQ15653 356 aa17.31■□□□□ 0.36
NEDD4L-238ENST00000635997 BRINP3Q76B58 766 aa17.3■□□□□ 0.36
NEDD4L-238ENST00000635997 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
NEDD4L-238ENST00000635997 GOLGA6L3A6NEY3 463 aa17.3■□□□□ 0.36
NEDD4L-238ENST00000635997 CCT4P50991 539 aaKnown RBP17.3■□□□□ 0.36
NEDD4L-238ENST00000635997 RALYLQ86SE5 291 aaKnown RBP17.3■□□□□ 0.36
NEDD4L-238ENST00000635997 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
NEDD4L-238ENST00000635997 ILDR1Q86SU0 546 aaPredicted RBP17.3■□□□□ 0.36
NEDD4L-238ENST00000635997 NEK4P51957 841 aa17.29■□□□□ 0.36
NEDD4L-238ENST00000635997 NPATQ14207 1427 aa17.29■□□□□ 0.36
NEDD4L-238ENST00000635997 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
NEDD4L-238ENST00000635997 AEBP1Q8IUX7 1158 aa17.29■□□□□ 0.36
NEDD4L-238ENST00000635997 CHMP4CQ96CF2 233 aa17.29■□□□□ 0.36
NEDD4L-238ENST00000635997 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
NEDD4L-238ENST00000635997 GNPATO15228 680 aa17.28■□□□□ 0.36
NEDD4L-238ENST00000635997 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
NEDD4L-238ENST00000635997 JCADQ9P266 1359 aa17.28■□□□□ 0.36
NEDD4L-238ENST00000635997 UNC5CLQ8IV45 518 aa17.28■□□□□ 0.36
NEDD4L-238ENST00000635997 A0A087WZG4 1122 aa17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 RRP12Q5JTH9 1297 aaKnown RBP17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 NBPF5PQ86XG9 351 aaPredicted RBP17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 NBPF4Q96M43 638 aa17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 YTHDC2Q9H6S0 1430 aaKnown RBP17.27■□□□□ 0.36
NEDD4L-238ENST00000635997 A0A0U1RQG5 324 aaPredicted RBP17.27■□□□□ 0.35
NEDD4L-238ENST00000635997 SAMD9Q5K651 1589 aa17.27■□□□□ 0.35
NEDD4L-238ENST00000635997 ST5P78524 1137 aa17.27■□□□□ 0.35
NEDD4L-238ENST00000635997 SMC3Q9UQE7 1217 aa17.27■□□□□ 0.35
NEDD4L-238ENST00000635997 PES1O00541 588 aaKnown RBP17.26■□□□□ 0.35
NEDD4L-238ENST00000635997 LRRCC1Q9C099 1032 aa17.26■□□□□ 0.35
NEDD4L-238ENST00000635997 TRPM2O94759 1503 aa17.26■□□□□ 0.35
NEDD4L-238ENST00000635997 PLEKHG1Q9ULL1 1385 aa17.26■□□□□ 0.35
NEDD4L-238ENST00000635997 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
NEDD4L-238ENST00000635997 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
NEDD4L-238ENST00000635997 JARID2Q92833 1246 aaPredicted RBP17.26■□□□□ 0.35
NEDD4L-238ENST00000635997 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
NEDD4L-238ENST00000635997 ATP2B1P20020 1258 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms