RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 TRIM27P14373 513 aa16.1■□□□□ 0.17
CACNA1A-219ENST00000635917 AAMPQ13685 434 aa16.1■□□□□ 0.17
CACNA1A-219ENST00000635917 MCM10Q7L590 875 aa16.1■□□□□ 0.17
CACNA1A-219ENST00000635917 LAS1LQ9Y4W2 734 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-219ENST00000635917 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-219ENST00000635917 GAS2L2Q8NHY3 880 aa16.1■□□□□ 0.17
CACNA1A-219ENST00000635917 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
CACNA1A-219ENST00000635917 ZNF335Q9H4Z2 1342 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-219ENST00000635917 NBPF6Q5VWK0 638 aa16.09■□□□□ 0.17
CACNA1A-219ENST00000635917 ATF7IPQ6VMQ6 1270 aa16.09■□□□□ 0.17
CACNA1A-219ENST00000635917 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-219ENST00000635917 C8orf58Q8NAV2 365 aa16.09■□□□□ 0.17
CACNA1A-219ENST00000635917 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-219ENST00000635917 NBPF4Q96M43 638 aa16.09■□□□□ 0.17
CACNA1A-219ENST00000635917 LMO7Q8WWI1 1683 aa16.09■□□□□ 0.17
CACNA1A-219ENST00000635917 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.17
CACNA1A-219ENST00000635917 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.16
CACNA1A-219ENST00000635917 KIF16BQ96L93 1317 aa16.08■□□□□ 0.16
CACNA1A-219ENST00000635917 MVPQ14764 893 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-219ENST00000635917 DZIP1LQ8IYY4 767 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-219ENST00000635917 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-219ENST00000635917 KIAA0232Q92628 1395 aa16.07■□□□□ 0.16
CACNA1A-219ENST00000635917 TNS3Q68CZ2 1445 aa16.07■□□□□ 0.16
CACNA1A-219ENST00000635917 TWISTNBQ3B726 338 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-219ENST00000635917 LTV1Q96GA3 475 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-219ENST00000635917 VIRMAQ69YN4 1812 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-219ENST00000635917 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-219ENST00000635917 AXIN2Q9Y2T1 843 aa16.06■□□□□ 0.16
CACNA1A-219ENST00000635917 MS4A1P11836 297 aa16.05■□□□□ 0.16
CACNA1A-219ENST00000635917 BRINP3Q76B58 766 aa16.05■□□□□ 0.16
CACNA1A-219ENST00000635917 USHBP1Q8N6Y0 703 aa16.05■□□□□ 0.16
CACNA1A-219ENST00000635917 IGHDP01880 384 aa16.05■□□□□ 0.16
CACNA1A-219ENST00000635917 SPATA31A3Q5VYP0 1347 aa16.05■□□□□ 0.16
CACNA1A-219ENST00000635917 ARHGAP45Q92619 1136 aa16.04■□□□□ 0.16
CACNA1A-219ENST00000635917 MAP3K5Q99683 1374 aa16.04■□□□□ 0.16
CACNA1A-219ENST00000635917 ABCC6O95255 1503 aa16.04■□□□□ 0.16
CACNA1A-219ENST00000635917 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 LMOD2Q6P5Q4 547 aa16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 IL17REQ8NFR9 667 aa16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 CEMIPQ8WUJ3 1361 aa16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 ELL2O00472 640 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 IPO8O15397 1037 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 KRT24Q2M2I5 525 aa16.03■□□□□ 0.16
CACNA1A-219ENST00000635917 SKAP1Q86WV1 359 aa16.02■□□□□ 0.16
CACNA1A-219ENST00000635917 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-219ENST00000635917 RTF1Q92541 710 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-219ENST00000635917 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-219ENST00000635917 CACNA1FO60840 1977 aa16.02■□□□□ 0.15
CACNA1A-219ENST00000635917 ERBB3P21860 1342 aa16.01■□□□□ 0.15
CACNA1A-219ENST00000635917 ANKRD24Q8TF21 1146 aa16.01■□□□□ 0.15
CACNA1A-219ENST00000635917 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-219ENST00000635917 TMEM57Q8N5G2 664 aa16.01■□□□□ 0.15
CACNA1A-219ENST00000635917 ADAMTS7Q9UKP4 1686 aa16■□□□□ 0.15
CACNA1A-219ENST00000635917 NHSL1Q5SYE7 1610 aa16■□□□□ 0.15
CACNA1A-219ENST00000635917 SLAIN2Q9P270 581 aa16■□□□□ 0.15
CACNA1A-219ENST00000635917 DDX19BQ9UMR2 479 aa16■□□□□ 0.15
CACNA1A-219ENST00000635917 ABCC4O15439 1325 aa15.99■□□□□ 0.15
CACNA1A-219ENST00000635917 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-219ENST00000635917 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
CACNA1A-219ENST00000635917 KDM3BQ7LBC6 1761 aa15.99■□□□□ 0.15
CACNA1A-219ENST00000635917 CPDO75976 1380 aa15.99■□□□□ 0.15
CACNA1A-219ENST00000635917 ZBTB40Q9NUA8 1239 aa15.98■□□□□ 0.15
CACNA1A-219ENST00000635917 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
CACNA1A-219ENST00000635917 RGS12O14924 1447 aa15.98■□□□□ 0.15
CACNA1A-219ENST00000635917 ABCA3Q99758 1704 aa15.98■□□□□ 0.15
CACNA1A-219ENST00000635917 ZBTB7CA1YPR0 619 aa15.98■□□□□ 0.15
CACNA1A-219ENST00000635917 HAP1P54257 671 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-219ENST00000635917 CABLES1Q8TDN4 633 aa15.97■□□□□ 0.15
CACNA1A-219ENST00000635917 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
CACNA1A-219ENST00000635917 SIPA1L3O60292 1781 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-219ENST00000635917 PLEKHG5O94827 1062 aa15.96■□□□□ 0.14
CACNA1A-219ENST00000635917 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.14
CACNA1A-219ENST00000635917 TAF7Q15545 349 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-219ENST00000635917 AMOTQ4VCS5 1084 aa15.95■□□□□ 0.14
CACNA1A-219ENST00000635917 OVOS2A0A0G2JMS6 1433 aa15.95■□□□□ 0.14
CACNA1A-219ENST00000635917 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-219ENST00000635917 AKAP4Q5JQC9 854 aa15.94■□□□□ 0.14
CACNA1A-219ENST00000635917 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
CACNA1A-219ENST00000635917 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-219ENST00000635917 LGR6Q9HBX8 967 aa15.94■□□□□ 0.14
CACNA1A-219ENST00000635917 HDAC1Q13547 482 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-219ENST00000635917 BACH2Q9BYV9 841 aa15.93■□□□□ 0.14
CACNA1A-219ENST00000635917 API5Q9BZZ5 524 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-219ENST00000635917 SOS1Q07889 1333 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-219ENST00000635917 SCN11AQ9UI33 1791 aa15.92■□□□□ 0.14
CACNA1A-219ENST00000635917 PKD1L3Q7Z443 1732 aa15.92■□□□□ 0.14
CACNA1A-219ENST00000635917 PDE4AP27815 886 aa15.91■□□□□ 0.14
CACNA1A-219ENST00000635917 ZNF530Q6P9A1 599 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-219ENST00000635917 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-219ENST00000635917 RWDD1Q9H446 243 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-219ENST00000635917 PTPRCP08575 1304 aa15.91■□□□□ 0.14
CACNA1A-219ENST00000635917 MEGF6O75095 1541 aa15.91■□□□□ 0.14
CACNA1A-219ENST00000635917 N4BP2Q86UW6 1770 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-219ENST00000635917 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-219ENST00000635917 CHRNA2Q15822 529 aa15.89■□□□□ 0.13
CACNA1A-219ENST00000635917 LTBP4Q8N2S1 1624 aa15.89■□□□□ 0.13
CACNA1A-219ENST00000635917 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms