RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 APBB1O00213 710 aa13.27□□□□□ -0.29
PSPC1-207ENST00000635251 CHL1O00533 1208 aa13.27□□□□□ -0.29
PSPC1-207ENST00000635251 MRE11P49959 708 aa13.27□□□□□ -0.29
PSPC1-207ENST00000635251 NRKQ7Z2Y5 1582 aa13.26□□□□□ -0.29
PSPC1-207ENST00000635251 C16orf71Q8IYS4 520 aaPredicted RBP13.26□□□□□ -0.29
PSPC1-207ENST00000635251 PANK2Q9BZ23 570 aa13.26□□□□□ -0.29
PSPC1-207ENST00000635251 ROBO2Q9HCK4 1378 aa13.26□□□□□ -0.29
PSPC1-207ENST00000635251 PTMSP20962 102 aa13.25□□□□□ -0.29
PSPC1-207ENST00000635251 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
PSPC1-207ENST00000635251 MSH6P52701 1360 aa13.25□□□□□ -0.29
PSPC1-207ENST00000635251 TNRQ92752 1358 aa13.25□□□□□ -0.29
PSPC1-207ENST00000635251 PTPRCP08575 1304 aa13.25□□□□□ -0.29
PSPC1-207ENST00000635251 CEP85Q6P2H3 762 aa13.25□□□□□ -0.29
PSPC1-207ENST00000635251 CASC1Q6TDU7 716 aa13.25□□□□□ -0.29
PSPC1-207ENST00000635251 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
PSPC1-207ENST00000635251 SKOR2Q2VWA4 1001 aaPredicted RBP13.24□□□□□ -0.29
PSPC1-207ENST00000635251 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
PSPC1-207ENST00000635251 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
PSPC1-207ENST00000635251 GRPEL1Q9HAV7 217 aa13.24□□□□□ -0.29
PSPC1-207ENST00000635251 RRAGDQ9NQL2 400 aaPredicted RBP13.24□□□□□ -0.29
PSPC1-207ENST00000635251 TMEM2Q9UHN6 1383 aa13.24□□□□□ -0.29
PSPC1-207ENST00000635251 RGS12O14924 1447 aa13.23□□□□□ -0.29
PSPC1-207ENST00000635251 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
PSPC1-207ENST00000635251 RABEP1Q15276 862 aa13.23□□□□□ -0.29
PSPC1-207ENST00000635251 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
PSPC1-207ENST00000635251 MEIS3Q99687 375 aa13.23□□□□□ -0.29
PSPC1-207ENST00000635251 ATP10DQ9P241 1426 aa13.23□□□□□ -0.29
PSPC1-207ENST00000635251 GOLGA6L22H0YM25 854 aa13.23□□□□□ -0.29
PSPC1-207ENST00000635251 OTUD7AQ8TE49 926 aaPredicted RBP13.23□□□□□ -0.29
PSPC1-207ENST00000635251 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
PSPC1-207ENST00000635251 RTL1A6NKG5 1358 aa13.23□□□□□ -0.29
PSPC1-207ENST00000635251 OVOS2A0A0J9YW53 1432 aa13.22□□□□□ -0.29
PSPC1-207ENST00000635251 OVOS2Q6IE36 1432 aa13.22□□□□□ -0.29
PSPC1-207ENST00000635251 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
PSPC1-207ENST00000635251 SSFA2P28290 1259 aa13.22□□□□□ -0.29
PSPC1-207ENST00000635251 SLC4A10Q6U841 1118 aa13.22□□□□□ -0.29
PSPC1-207ENST00000635251 ISY1Q9ULR0 285 aaKnown RBP13.22□□□□□ -0.29
PSPC1-207ENST00000635251 USP6P35125 1406 aa13.22□□□□□ -0.29
PSPC1-207ENST00000635251 HMMRO75330 724 aa13.22□□□□□ -0.29
PSPC1-207ENST00000635251 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
PSPC1-207ENST00000635251 SDSP20132 328 aa13.21□□□□□ -0.29
PSPC1-207ENST00000635251 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
PSPC1-207ENST00000635251 FOXO3O43524 673 aa13.2□□□□□ -0.3
PSPC1-207ENST00000635251 CRB1P82279 1406 aa13.2□□□□□ -0.3
PSPC1-207ENST00000635251 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
PSPC1-207ENST00000635251 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
PSPC1-207ENST00000635251 MTHFSDQ2M296 383 aaKnown RBP13.19□□□□□ -0.3
PSPC1-207ENST00000635251 MAP3K19Q56UN5 1328 aa13.19□□□□□ -0.3
PSPC1-207ENST00000635251 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
PSPC1-207ENST00000635251 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
PSPC1-207ENST00000635251 F6X3S4 739 aa13.19□□□□□ -0.3
PSPC1-207ENST00000635251 USP31Q70CQ4 1352 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 AMPHP49418 695 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
PSPC1-207ENST00000635251 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 UBR1Q8IWV7 1749 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 TOPAZ1Q8N9V7 1692 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 ST18O60284 1047 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 REC8O95072 547 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 LTKP29376 864 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 G2E3Q7L622 706 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 NGDNQ8NEJ9 315 aaKnown RBP13.18□□□□□ -0.3
PSPC1-207ENST00000635251 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
PSPC1-207ENST00000635251 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
PSPC1-207ENST00000635251 PLEKHG1Q9ULL1 1385 aa13.17□□□□□ -0.3
PSPC1-207ENST00000635251 BAG4O95429 457 aaKnown RBP13.16□□□□□ -0.3
PSPC1-207ENST00000635251 NUCB2P80303 420 aa13.16□□□□□ -0.3
PSPC1-207ENST00000635251 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
PSPC1-207ENST00000635251 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
PSPC1-207ENST00000635251 FLT4P35916 1363 aa13.16□□□□□ -0.3
PSPC1-207ENST00000635251 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
PSPC1-207ENST00000635251 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
PSPC1-207ENST00000635251 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
PSPC1-207ENST00000635251 ERC2O15083 957 aa13.15□□□□□ -0.3
PSPC1-207ENST00000635251 GNAI2P04899 355 aa13.15□□□□□ -0.3
PSPC1-207ENST00000635251 TRIM44Q96DX7 344 aaPredicted RBP13.15□□□□□ -0.3
PSPC1-207ENST00000635251 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
PSPC1-207ENST00000635251 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
PSPC1-207ENST00000635251 AMOTL2Q9Y2J4 779 aa13.15□□□□□ -0.3
PSPC1-207ENST00000635251 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
PSPC1-207ENST00000635251 EYA1Q99502 592 aa13.14□□□□□ -0.31
PSPC1-207ENST00000635251 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
PSPC1-207ENST00000635251 RIMS1Q86UR5 1692 aaKnown RBP13.14□□□□□ -0.31
PSPC1-207ENST00000635251 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
PSPC1-207ENST00000635251 PDE1AP54750 535 aa13.14□□□□□ -0.31
PSPC1-207ENST00000635251 FKBP5Q13451 457 aaPredicted RBP13.14□□□□□ -0.31
PSPC1-207ENST00000635251 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
PSPC1-207ENST00000635251 CWC22Q9HCG8 908 aaKnown RBP13.14□□□□□ -0.31
PSPC1-207ENST00000635251 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
PSPC1-207ENST00000635251 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
PSPC1-207ENST00000635251 KLHL40Q2TBA0 621 aa13.13□□□□□ -0.31
PSPC1-207ENST00000635251 CLCN1P35523 988 aa13.13□□□□□ -0.31
PSPC1-207ENST00000635251 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
PSPC1-207ENST00000635251 OSBPL3Q9H4L5 887 aa13.13□□□□□ -0.31
PSPC1-207ENST00000635251 IGSF1Q8N6C5 1336 aa13.12□□□□□ -0.31
PSPC1-207ENST00000635251 GNAI3P08754 354 aa13.12□□□□□ -0.31
PSPC1-207ENST00000635251 FLIIQ13045 1269 aa13.12□□□□□ -0.31
PSPC1-207ENST00000635251 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
PSPC1-207ENST00000635251 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
PSPC1-207ENST00000635251 CEBPAP49715 358 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms