RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 IGSF1Q8N6C5 1336 aa17.22■□□□□ 0.35
CHD2-218ENST00000629346 LTV1Q96GA3 475 aaPredicted RBP17.22■□□□□ 0.35
CHD2-218ENST00000629346 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
CHD2-218ENST00000629346 ANKRD36BQ8N2N9 1353 aa17.22■□□□□ 0.35
CHD2-218ENST00000629346 NSD2O96028 1365 aa17.2■□□□□ 0.34
CHD2-218ENST00000629346 TOMM70O94826 608 aa17.2■□□□□ 0.34
CHD2-218ENST00000629346 TNS4Q8IZW8 715 aa17.2■□□□□ 0.34
CHD2-218ENST00000629346 LY75O60449 1722 aa17.19■□□□□ 0.34
CHD2-218ENST00000629346 HTRA3P83110 453 aa17.19■□□□□ 0.34
CHD2-218ENST00000629346 NME9Q86XW9 330 aa17.19■□□□□ 0.34
CHD2-218ENST00000629346 USP47Q96K76 1375 aa17.18■□□□□ 0.34
CHD2-218ENST00000629346 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
CHD2-218ENST00000629346 LTN1O94822 1766 aa17.17■□□□□ 0.34
CHD2-218ENST00000629346 PRELPP51888 382 aa17.16■□□□□ 0.34
CHD2-218ENST00000629346 SMIM5Q71RC9 77 aa17.15■□□□□ 0.34
CHD2-218ENST00000629346 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
CHD2-218ENST00000629346 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
CHD2-218ENST00000629346 KLRG1Q96E93 195 aa17.15■□□□□ 0.34
CHD2-218ENST00000629346 NMRK2Q9NPI5 230 aa17.15■□□□□ 0.34
CHD2-218ENST00000629346 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
CHD2-218ENST00000629346 PHF14O94880 888 aa17.13■□□□□ 0.33
CHD2-218ENST00000629346 WDR90Q96KV7 1748 aa17.12■□□□□ 0.33
CHD2-218ENST00000629346 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
CHD2-218ENST00000629346 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
CHD2-218ENST00000629346 IP6K1Q92551 441 aa17.11■□□□□ 0.33
CHD2-218ENST00000629346 C5P01031 1676 aa17.1■□□□□ 0.33
CHD2-218ENST00000629346 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
CHD2-218ENST00000629346 AK7Q96M32 723 aa17.1■□□□□ 0.33
CHD2-218ENST00000629346 BCS1LQ9Y276 419 aa17.09■□□□□ 0.33
CHD2-218ENST00000629346 MON2Q7Z3U7 1717 aa17.08■□□□□ 0.32
CHD2-218ENST00000629346 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.32
CHD2-218ENST00000629346 ARHGAP27Q6ZUM4 889 aa17.08■□□□□ 0.32
CHD2-218ENST00000629346 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
CHD2-218ENST00000629346 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
CHD2-218ENST00000629346 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
CHD2-218ENST00000629346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.07■□□□□ 0.32
CHD2-218ENST00000629346 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
CHD2-218ENST00000629346 MEGF6O75095 1541 aa17.06■□□□□ 0.32
CHD2-218ENST00000629346 PCNTO95613 3336 aa17.06■□□□□ 0.32
CHD2-218ENST00000629346 USP54Q70EL1 1684 aa17.05■□□□□ 0.32
CHD2-218ENST00000629346 HMGB2P26583 209 aaKnown RBP17.05■□□□□ 0.32
CHD2-218ENST00000629346 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
CHD2-218ENST00000629346 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
CHD2-218ENST00000629346 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
CHD2-218ENST00000629346 FBLN1P23142 703 aa17.04■□□□□ 0.32
CHD2-218ENST00000629346 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
CHD2-218ENST00000629346 FAM208AQ9UK61 1670 aaKnown RBP17.04■□□□□ 0.32
CHD2-218ENST00000629346 AMPHP49418 695 aa17.03■□□□□ 0.32
CHD2-218ENST00000629346 FSTL1Q12841 308 aa17.03■□□□□ 0.32
CHD2-218ENST00000629346 SLC12A5Q9H2X9 1139 aa17.03■□□□□ 0.32
CHD2-218ENST00000629346 C4BP0C0L5 1744 aa17.03■□□□□ 0.32
CHD2-218ENST00000629346 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
CHD2-218ENST00000629346 TAF1LQ8IZX4 1826 aa17.03■□□□□ 0.32
CHD2-218ENST00000629346 HOXC9P31274 260 aa17.02■□□□□ 0.32
CHD2-218ENST00000629346 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.31
CHD2-218ENST00000629346 MAP3K19Q56UN5 1328 aa17.01■□□□□ 0.31
CHD2-218ENST00000629346 PXDNLA1KZ92 1463 aa17.01■□□□□ 0.31
CHD2-218ENST00000629346 MMP10P09238 476 aa17.01■□□□□ 0.31
CHD2-218ENST00000629346 NBPF6Q5VWK0 638 aa17.01■□□□□ 0.31
CHD2-218ENST00000629346 C9orf131Q5VYM1 1079 aa17.01■□□□□ 0.31
CHD2-218ENST00000629346 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
CHD2-218ENST00000629346 NBPF4Q96M43 638 aa17.01■□□□□ 0.31
CHD2-218ENST00000629346 TOGARAM1Q9Y4F4 1720 aa17.01■□□□□ 0.31
CHD2-218ENST00000629346 FCHSD2O94868 740 aa17■□□□□ 0.31
CHD2-218ENST00000629346 SSFA2P28290 1259 aa17■□□□□ 0.31
CHD2-218ENST00000629346 ROCK2O75116 1388 aaKnown RBP17■□□□□ 0.31
CHD2-218ENST00000629346 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
CHD2-218ENST00000629346 HSPA1AP0DMV8 641 aaKnown RBP16.99■□□□□ 0.31
CHD2-218ENST00000629346 HSPA1BP0DMV9 641 aaKnown RBP16.99■□□□□ 0.31
CHD2-218ENST00000629346 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
CHD2-218ENST00000629346 L3MBTL2Q969R5 705 aa16.99■□□□□ 0.31
CHD2-218ENST00000629346 RRAGCQ9HB90 399 aa16.99■□□□□ 0.31
CHD2-218ENST00000629346 N4BP2Q86UW6 1770 aaPredicted RBP16.99■□□□□ 0.31
CHD2-218ENST00000629346 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
CHD2-218ENST00000629346 DPEP1P16444 411 aa16.98■□□□□ 0.31
CHD2-218ENST00000629346 TATP17735 454 aaPredicted RBP16.98■□□□□ 0.31
CHD2-218ENST00000629346 TGFB2P61812 414 aa16.98■□□□□ 0.31
CHD2-218ENST00000629346 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
CHD2-218ENST00000629346 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
CHD2-218ENST00000629346 KCPQ6ZWJ8 1503 aa16.97■□□□□ 0.31
CHD2-218ENST00000629346 GNPATO15228 680 aa16.97■□□□□ 0.31
CHD2-218ENST00000629346 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
CHD2-218ENST00000629346 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.31
CHD2-218ENST00000629346 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
CHD2-218ENST00000629346 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.31
CHD2-218ENST00000629346 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.31
CHD2-218ENST00000629346 COG3Q96JB2 828 aa16.96■□□□□ 0.31
CHD2-218ENST00000629346 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
CHD2-218ENST00000629346 PIGBQ92521 554 aa16.95■□□□□ 0.3
CHD2-218ENST00000629346 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
CHD2-218ENST00000629346 SIK1P57059 783 aa16.94■□□□□ 0.3
CHD2-218ENST00000629346 SMC1BQ8NDV3 1235 aa16.94■□□□□ 0.3
CHD2-218ENST00000629346 RNF181Q9P0P0 153 aa16.94■□□□□ 0.3
CHD2-218ENST00000629346 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
CHD2-218ENST00000629346 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
CHD2-218ENST00000629346 CYP27B1O15528 508 aa16.93■□□□□ 0.3
CHD2-218ENST00000629346 SLC34A2O95436 690 aa16.93■□□□□ 0.3
CHD2-218ENST00000629346 RRS1Q15050 365 aaKnown RBP16.93■□□□□ 0.3
CHD2-218ENST00000629346 ITPK1Q13572 414 aa16.92■□□□□ 0.3
CHD2-218ENST00000629346 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms