RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
LINC01943-201ENST00000625410 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
LINC01943-201ENST00000625410 MYH16Q9H6N6 1097 aa12.86□□□□□ -0.35
LINC01943-201ENST00000625410 ABCC6O95255 1503 aa12.86□□□□□ -0.35
LINC01943-201ENST00000625410 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
LINC01943-201ENST00000625410 RGPD5Q99666 1765 aa12.85□□□□□ -0.35
LINC01943-201ENST00000625410 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
LINC01943-201ENST00000625410 B4GALNT3Q6L9W6 998 aa12.85□□□□□ -0.35
LINC01943-201ENST00000625410 USHBP1Q8N6Y0 703 aa12.85□□□□□ -0.35
LINC01943-201ENST00000625410 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
LINC01943-201ENST00000625410 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
LINC01943-201ENST00000625410 CABLES1Q8TDN4 633 aa12.84□□□□□ -0.35
LINC01943-201ENST00000625410 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
LINC01943-201ENST00000625410 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
LINC01943-201ENST00000625410 CPDO75976 1380 aa12.83□□□□□ -0.36
LINC01943-201ENST00000625410 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
LINC01943-201ENST00000625410 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
LINC01943-201ENST00000625410 CT47B1P0C2W7 299 aaPredicted RBP12.82□□□□□ -0.36
LINC01943-201ENST00000625410 RXRBP28702 533 aa12.82□□□□□ -0.36
LINC01943-201ENST00000625410 MBIPQ9NS73 344 aa12.82□□□□□ -0.36
LINC01943-201ENST00000625410 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
LINC01943-201ENST00000625410 ZC3H6P61129 1189 aaKnown RBP12.81□□□□□ -0.36
LINC01943-201ENST00000625410 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
LINC01943-201ENST00000625410 MCM10Q7L590 875 aa12.81□□□□□ -0.36
LINC01943-201ENST00000625410 TSPYL6Q8N831 410 aa12.81□□□□□ -0.36
LINC01943-201ENST00000625410 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
LINC01943-201ENST00000625410 ERBB3P21860 1342 aa12.81□□□□□ -0.36
LINC01943-201ENST00000625410 ZBTB7CA1YPR0 619 aa12.8□□□□□ -0.36
LINC01943-201ENST00000625410 CHL1O00533 1208 aa12.8□□□□□ -0.36
LINC01943-201ENST00000625410 NEFMP07197 916 aa12.8□□□□□ -0.36
LINC01943-201ENST00000625410 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
LINC01943-201ENST00000625410 CFAP44Q96MT7 982 aa12.8□□□□□ -0.36
LINC01943-201ENST00000625410 BCL2L13Q9BXK5 485 aa12.8□□□□□ -0.36
LINC01943-201ENST00000625410 KIAA0232Q92628 1395 aa12.8□□□□□ -0.36
LINC01943-201ENST00000625410 RLBP1P12271 317 aa12.79□□□□□ -0.36
LINC01943-201ENST00000625410 GNAI1P63096 354 aa12.79□□□□□ -0.36
LINC01943-201ENST00000625410 C8orf58Q8NAV2 365 aa12.79□□□□□ -0.36
LINC01943-201ENST00000625410 GAS2L2Q8NHY3 880 aa12.79□□□□□ -0.36
LINC01943-201ENST00000625410 ADAMTS7Q9UKP4 1686 aa12.79□□□□□ -0.36
LINC01943-201ENST00000625410 MAP3K5Q99683 1374 aa12.79□□□□□ -0.36
LINC01943-201ENST00000625410 VAMP4O75379 141 aa12.78□□□□□ -0.36
LINC01943-201ENST00000625410 CALD1Q05682 793 aaKnown RBP12.78□□□□□ -0.36
LINC01943-201ENST00000625410 AFF2P51816 1311 aa12.78□□□□□ -0.36
LINC01943-201ENST00000625410 MEGF6O75095 1541 aa12.78□□□□□ -0.36
LINC01943-201ENST00000625410 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.37
LINC01943-201ENST00000625410 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.37
LINC01943-201ENST00000625410 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
LINC01943-201ENST00000625410 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
LINC01943-201ENST00000625410 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
LINC01943-201ENST00000625410 KRT24Q2M2I5 525 aa12.77□□□□□ -0.37
LINC01943-201ENST00000625410 ERICH6Q7L0X2 663 aa12.77□□□□□ -0.37
LINC01943-201ENST00000625410 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
LINC01943-201ENST00000625410 IL17REQ8NFR9 667 aa12.77□□□□□ -0.37
LINC01943-201ENST00000625410 PANK1Q8TE04 598 aa12.77□□□□□ -0.37
LINC01943-201ENST00000625410 CEMIPQ8WUJ3 1361 aa12.77□□□□□ -0.37
LINC01943-201ENST00000625410 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
LINC01943-201ENST00000625410 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
LINC01943-201ENST00000625410 COL22A1Q8NFW1 1626 aaPredicted RBP12.76□□□□□ -0.37
LINC01943-201ENST00000625410 ALDH1L2Q3SY69 923 aa12.75□□□□□ -0.37
LINC01943-201ENST00000625410 MRPL50Q8N5N7 158 aaKnown RBP12.75□□□□□ -0.37
LINC01943-201ENST00000625410 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.75□□□□□ -0.37
LINC01943-201ENST00000625410 COL5A2P05997 1499 aaPredicted RBP12.74□□□□□ -0.37
LINC01943-201ENST00000625410 KDM2BQ8NHM5 1336 aa12.74□□□□□ -0.37
LINC01943-201ENST00000625410 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
LINC01943-201ENST00000625410 RBM6P78332 1123 aaKnown RBP12.74□□□□□ -0.37
LINC01943-201ENST00000625410 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
LINC01943-201ENST00000625410 SRCAPQ6ZRS2 3230 aa12.73□□□□□ -0.37
LINC01943-201ENST00000625410 TRIM27P14373 513 aa12.73□□□□□ -0.37
LINC01943-201ENST00000625410 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
LINC01943-201ENST00000625410 QTRT2Q9H974 415 aaKnown RBP12.73□□□□□ -0.37
LINC01943-201ENST00000625410 SMC4Q9NTJ3 1288 aa12.73□□□□□ -0.37
LINC01943-201ENST00000625410 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
LINC01943-201ENST00000625410 KDM3BQ7LBC6 1761 aa12.73□□□□□ -0.37
LINC01943-201ENST00000625410 OVOS2A0A0G2JMS6 1433 aa12.72□□□□□ -0.37
LINC01943-201ENST00000625410 RGS12O14924 1447 aa12.72□□□□□ -0.37
LINC01943-201ENST00000625410 SIPA1L3O60292 1781 aaPredicted RBP12.72□□□□□ -0.37
LINC01943-201ENST00000625410 TWISTNBQ3B726 338 aaPredicted RBP12.72□□□□□ -0.37
LINC01943-201ENST00000625410 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
LINC01943-201ENST00000625410 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
LINC01943-201ENST00000625410 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
LINC01943-201ENST00000625410 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
LINC01943-201ENST00000625410 COG6Q9Y2V7 657 aa12.72□□□□□ -0.37
LINC01943-201ENST00000625410 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
LINC01943-201ENST00000625410 PLEKHG2Q9H7P9 1386 aa12.71□□□□□ -0.37
LINC01943-201ENST00000625410 NOB1Q9ULX3 412 aaKnown RBP12.71□□□□□ -0.37
LINC01943-201ENST00000625410 ELL2O00472 640 aaPredicted RBP12.7□□□□□ -0.38
LINC01943-201ENST00000625410 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
LINC01943-201ENST00000625410 ZKSCAN2Q63HK3 967 aa12.7□□□□□ -0.38
LINC01943-201ENST00000625410 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
LINC01943-201ENST00000625410 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
LINC01943-201ENST00000625410 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
LINC01943-201ENST00000625410 SHANK3Q9BYB0 1731 aa12.69□□□□□ -0.38
LINC01943-201ENST00000625410 TCERG1O14776 1098 aaKnown RBP12.69□□□□□ -0.38
LINC01943-201ENST00000625410 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
LINC01943-201ENST00000625410 AMOTQ4VCS5 1084 aa12.69□□□□□ -0.38
LINC01943-201ENST00000625410 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
LINC01943-201ENST00000625410 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
LINC01943-201ENST00000625410 RTF1Q92541 710 aaKnown RBP12.69□□□□□ -0.38
LINC01943-201ENST00000625410 CLUAP1Q96AJ1 413 aa12.69□□□□□ -0.38
LINC01943-201ENST00000625410 MRC1P22897 1456 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms