RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 FILIP1Q7Z7B0 1213 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 FAM177A1Q8N128 213 aaPredicted RBP6.71□□□□□ -1.34
ERCC6-213ENST00000624341 ERICH2A1L162 156 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 RAD21O60216 631 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 CT47B1P0C2W7 299 aaPredicted RBP6.71□□□□□ -1.34
ERCC6-213ENST00000624341 SSFA2P28290 1259 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 STK38Q15208 465 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 SULT6B1Q6IMI4 303 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 AK7Q96M32 723 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 NPATQ14207 1427 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 ERBINQ96RT1 1412 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 SAMD9LQ8IVG5 1584 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 DHX16O60231 1041 aaKnown RBP6.71□□□□□ -1.34
ERCC6-213ENST00000624341 BRPF1P55201 1214 aaPredicted RBP6.71□□□□□ -1.34
ERCC6-213ENST00000624341 NLRP6P59044 892 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 UPF3BQ9BZI7 483 aaKnown RBP6.71□□□□□ -1.34
ERCC6-213ENST00000624341 IL1RAPL2Q9NP60 686 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 G3V3G9 751 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 RARSP54136 660 aaKnown RBP6.7□□□□□ -1.34
ERCC6-213ENST00000624341 DCAF8Q5TAQ9 597 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 TNPO1Q92973 898 aaKnown RBP6.7□□□□□ -1.34
ERCC6-213ENST00000624341 PSME1Q06323 249 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 NAIPQ13075 1403 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 SIGLEC1Q9BZZ2 1709 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 ME1P48163 572 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 PRAM1Q96QH2 718 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 THUMPD2Q9BTF0 503 aaKnown RBP6.7□□□□□ -1.34
ERCC6-213ENST00000624341 CWC15Q9P013 229 aaKnown RBP6.7□□□□□ -1.34
ERCC6-213ENST00000624341 CROCC2H7BZ55 1655 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 C3P01024 1663 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 MAST1Q9Y2H9 1570 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 PTPRTO14522 1441 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 H0YHG0 523 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 MAPK8IP2Q13387 824 aaPredicted RBP6.7□□□□□ -1.34
ERCC6-213ENST00000624341 CAGE1Q8TC20 777 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 SSH1Q8WYL5 1049 aa6.7□□□□□ -1.34
ERCC6-213ENST00000624341 SERPINC1P01008 464 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 CBX1P83916 185 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 STK11IPQ8N1F8 1099 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 PDCL2Q8N4E4 241 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 CABP1Q9NZU7 370 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 TRAPPC8Q9Y2L5 1435 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 FERMT3Q86UX7 667 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 TMPOP42166 694 aaKnown RBP6.69□□□□□ -1.34
ERCC6-213ENST00000624341 HDGFL1Q5TGJ6 251 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 CWC27Q6UX04 472 aaKnown RBP6.69□□□□□ -1.34
ERCC6-213ENST00000624341 EXOC6BQ9Y2D4 811 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 IQSEC2Q5JU85 1478 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 SHANK2Q9UPX8 1470 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 PTPN23Q9H3S7 1636 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 KIDINS220Q9ULH0 1771 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 ATP7AQ04656 1500 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 AEBP1Q8IUX7 1158 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 ZNF396Q96N95 335 aaPredicted RBP6.69□□□□□ -1.34
ERCC6-213ENST00000624341 SIL1Q9H173 461 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 NUP62CLQ9H1M0 184 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 ERICH4A6NGS2 130 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 IGHDP01880 384 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 CCT4P50991 539 aaKnown RBP6.69□□□□□ -1.34
ERCC6-213ENST00000624341 DUSP27Q5VZP5 1158 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 VPS37DQ86XT2 251 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 SPATA32Q96LK8 384 aa6.69□□□□□ -1.34
ERCC6-213ENST00000624341 JAKMIP1Q96N16 626 aaKnown RBP6.69□□□□□ -1.34
ERCC6-213ENST00000624341 FYB1O15117 783 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 SMARCA5O60264 1052 aaPredicted RBP6.68□□□□□ -1.34
ERCC6-213ENST00000624341 CAMK4Q16566 473 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 GAS2L2Q8NHY3 880 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 CERKQ8TCT0 537 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 RAPGEF4Q8WZA2 1011 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 MTMR7Q9Y216 660 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 INO80Q9ULG1 1556 aaPredicted RBP6.68□□□□□ -1.34
ERCC6-213ENST00000624341 AXDND1Q5T1B0 1012 aaPredicted RBP6.68□□□□□ -1.34
ERCC6-213ENST00000624341 LEKR1Q6ZMV7 388 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 SYTL4Q96C24 671 aaPredicted RBP6.68□□□□□ -1.34
ERCC6-213ENST00000624341 PHF23Q9BUL5 403 aaPredicted RBP6.68□□□□□ -1.34
ERCC6-213ENST00000624341 GPATCH8Q9UKJ3 1502 aaKnown RBP6.68□□□□□ -1.34
ERCC6-213ENST00000624341 RTEL1-TNFRSF6BF6WH68 1400 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 HIP1O00291 1037 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
ERCC6-213ENST00000624341 PDRG1Q9NUG6 133 aa6.68□□□□□ -1.34
ERCC6-213ENST00000624341 DNMT1P26358 1616 aaKnown RBP6.68□□□□□ -1.34
ERCC6-213ENST00000624341 SYCP2Q9BX26 1530 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 SRGAP3O43295 1099 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 EVA1CP58658 441 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 BLOC1S2Q6QNY1 142 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 RPAP2Q8IXW5 612 aaPredicted RBP6.67□□□□□ -1.34
ERCC6-213ENST00000624341 SRCIN1Q9C0H9 1055 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 NLRP2Q9NX02 1062 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 SETD1BQ9UPS6 1966 aaKnown RBP6.67□□□□□ -1.34
ERCC6-213ENST00000624341 CCP110O43303 1012 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 OFD1O75665 1012 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 CNKSR2Q8WXI2 1034 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 DDX54Q8TDD1 881 aaKnown RBP6.67□□□□□ -1.34
ERCC6-213ENST00000624341 PANK2Q9BZ23 570 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 GDPD2Q9HCC8 539 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 USP25Q9UHP3 1055 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 FILIP1LQ4L180 1135 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 NUTM1Q86Y26 1132 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 PDCL3Q9H2J4 239 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 PODXL2Q9NZ53 605 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms