RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 ERC1Q8IUD2 1116 aa14.06□□□□□ -0.16
ATRX-214ENST00000624166 PDRG1Q9NUG6 133 aa14.06□□□□□ -0.16
ATRX-214ENST00000624166 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
ATRX-214ENST00000624166 PTPRCP08575 1304 aa14.05□□□□□ -0.16
ATRX-214ENST00000624166 SDSP20132 328 aa14.05□□□□□ -0.16
ATRX-214ENST00000624166 NEXNQ0ZGT2 675 aa14.05□□□□□ -0.16
ATRX-214ENST00000624166 EXOC6BQ9Y2D4 811 aa14.05□□□□□ -0.16
ATRX-214ENST00000624166 ADGBQ8N7X0 1667 aa14.05□□□□□ -0.16
ATRX-214ENST00000624166 DDX58O95786 925 aaKnown RBP14.05□□□□□ -0.16
ATRX-214ENST00000624166 TPM1P09493 284 aa14.05□□□□□ -0.16
ATRX-214ENST00000624166 NOM1Q5C9Z4 860 aaKnown RBP14.05□□□□□ -0.16
ATRX-214ENST00000624166 SPATA32Q96LK8 384 aa14.05□□□□□ -0.16
ATRX-214ENST00000624166 GTPBP4Q9BZE4 634 aaKnown RBP14.05□□□□□ -0.16
ATRX-214ENST00000624166 SH2B1Q9NRF2 756 aaPredicted RBP14.05□□□□□ -0.16
ATRX-214ENST00000624166 ZHX1Q9UKY1 873 aaPredicted RBP14.05□□□□□ -0.16
ATRX-214ENST00000624166 RBSNQ9H1K0 784 aa14.04□□□□□ -0.16
ATRX-214ENST00000624166 ADAMTS12P58397 1594 aa14.04□□□□□ -0.16
ATRX-214ENST00000624166 NUTM2FA1L443 756 aa14.04□□□□□ -0.16
ATRX-214ENST00000624166 HOOK1Q9UJC3 728 aaKnown RBP14.04□□□□□ -0.16
ATRX-214ENST00000624166 LIMCH1Q9UPQ0 1083 aa14.04□□□□□ -0.16
ATRX-214ENST00000624166 ANKRD44Q8N8A2 993 aa14.04□□□□□ -0.16
ATRX-214ENST00000624166 ZNF396Q96N95 335 aaPredicted RBP14.04□□□□□ -0.16
ATRX-214ENST00000624166 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
ATRX-214ENST00000624166 SCAND2PQ9GZW5 306 aaPredicted RBP14.04□□□□□ -0.16
ATRX-214ENST00000624166 MRPL50Q8N5N7 158 aaKnown RBP14.03□□□□□ -0.16
ATRX-214ENST00000624166 FSD1Q9BTV5 496 aa14.03□□□□□ -0.16
ATRX-214ENST00000624166 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
ATRX-214ENST00000624166 DCTPP1Q9H773 170 aa14.03□□□□□ -0.16
ATRX-214ENST00000624166 CFAP45Q9UL16 551 aa14.03□□□□□ -0.16
ATRX-214ENST00000624166 CPLX1O14810 134 aa14.03□□□□□ -0.16
ATRX-214ENST00000624166 JAKMIP1Q96N16 626 aaKnown RBP14.03□□□□□ -0.16
ATRX-214ENST00000624166 GDPD2Q9HCC8 539 aa14.03□□□□□ -0.16
ATRX-214ENST00000624166 NOS1P29475 1434 aa14.03□□□□□ -0.16
ATRX-214ENST00000624166 ZNF500O60304 480 aaPredicted RBP14.02□□□□□ -0.16
ATRX-214ENST00000624166 NEMFO60524 1076 aa14.02□□□□□ -0.16
ATRX-214ENST00000624166 SYNE3Q6ZMZ3 975 aa14.02□□□□□ -0.16
ATRX-214ENST00000624166 RAB11FIP3O75154 756 aa14.02□□□□□ -0.16
ATRX-214ENST00000624166 HCLS1P14317 486 aaPredicted RBP14.02□□□□□ -0.16
ATRX-214ENST00000624166 INTS4Q96HW7 963 aaKnown RBP14.02□□□□□ -0.16
ATRX-214ENST00000624166 USP26Q9BXU7 913 aa14.02□□□□□ -0.16
ATRX-214ENST00000624166 STX6O43752 255 aa14.02□□□□□ -0.17
ATRX-214ENST00000624166 PTPN14Q15678 1187 aa14.02□□□□□ -0.17
ATRX-214ENST00000624166 BLOC1S2Q6QNY1 142 aa14.02□□□□□ -0.17
ATRX-214ENST00000624166 USP19O94966 1318 aa14.02□□□□□ -0.17
ATRX-214ENST00000624166 TNNT1P13805 278 aa14.01□□□□□ -0.17
ATRX-214ENST00000624166 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
ATRX-214ENST00000624166 DENND4BO75064 1496 aaPredicted RBP14.01□□□□□ -0.17
ATRX-214ENST00000624166 SMC2O95347 1197 aa14.01□□□□□ -0.17
ATRX-214ENST00000624166 BCL11BQ9C0K0 894 aaPredicted RBP14.01□□□□□ -0.17
ATRX-214ENST00000624166 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
ATRX-214ENST00000624166 PLEKHM2Q8IWE5 1019 aa14.01□□□□□ -0.17
ATRX-214ENST00000624166 CEP57L1Q8IYX8 460 aa14.01□□□□□ -0.17
ATRX-214ENST00000624166 PAXBP1Q9Y5B6 917 aa14.01□□□□□ -0.17
ATRX-214ENST00000624166 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
ATRX-214ENST00000624166 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
ATRX-214ENST00000624166 CAVIN2O95810 425 aa14□□□□□ -0.17
ATRX-214ENST00000624166 HSP90B2PQ58FF3 399 aa14□□□□□ -0.17
ATRX-214ENST00000624166 DDX19AQ9NUU7 478 aaKnown RBP14□□□□□ -0.17
ATRX-214ENST00000624166 RTEL1-TNFRSF6BF6WH68 1400 aa14□□□□□ -0.17
ATRX-214ENST00000624166 ZBTB7BO15156 539 aaPredicted RBP14□□□□□ -0.17
ATRX-214ENST00000624166 GAS2L3Q86XJ1 694 aa14□□□□□ -0.17
ATRX-214ENST00000624166 KIF18AQ8NI77 898 aa14□□□□□ -0.17
ATRX-214ENST00000624166 FBXW7Q969H0 707 aa14□□□□□ -0.17
ATRX-214ENST00000624166 IL1RAPL2Q9NP60 686 aa14□□□□□ -0.17
ATRX-214ENST00000624166 C1orf141Q5JVX7 400 aa14□□□□□ -0.17
ATRX-214ENST00000624166 CWC27Q6UX04 472 aaKnown RBP14□□□□□ -0.17
ATRX-214ENST00000624166 CCDC83Q8IWF9 413 aa14□□□□□ -0.17
ATRX-214ENST00000624166 KIF1BPQ96EK5 621 aa14□□□□□ -0.17
ATRX-214ENST00000624166 LMBRD1Q9NUN5 540 aa14□□□□□ -0.17
ATRX-214ENST00000624166 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14□□□□□ -0.17
ATRX-214ENST00000624166 BCORL1Q5H9F3 1711 aa14□□□□□ -0.17
ATRX-214ENST00000624166 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 IBTKQ9P2D0 1353 aaPredicted RBP13.99□□□□□ -0.17
ATRX-214ENST00000624166 HDGFL1Q5TGJ6 251 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 ZGPATQ8N5A5 531 aaKnown RBP13.99□□□□□ -0.17
ATRX-214ENST00000624166 EID1Q9Y6B2 187 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 DISP1Q96F81 1524 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 NPHP1O15259 732 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 VAMP4O75379 141 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 GLRX3O76003 335 aaKnown RBP13.99□□□□□ -0.17
ATRX-214ENST00000624166 ZSCAN22P10073 491 aaPredicted RBP13.99□□□□□ -0.17
ATRX-214ENST00000624166 TRIM29Q14134 588 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 OLFM4Q6UX06 510 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 FILIP1Q7Z7B0 1213 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 CALCOCO1Q9P1Z2 691 aa13.99□□□□□ -0.17
ATRX-214ENST00000624166 TSR1Q2NL82 804 aaKnown RBP13.98□□□□□ -0.17
ATRX-214ENST00000624166 AK7Q96M32 723 aa13.98□□□□□ -0.17
ATRX-214ENST00000624166 SRGAP3O43295 1099 aa13.98□□□□□ -0.17
ATRX-214ENST00000624166 PDE1AP54750 535 aa13.98□□□□□ -0.17
ATRX-214ENST00000624166 SETQ01105 290 aaPredicted RBP13.98□□□□□ -0.17
ATRX-214ENST00000624166 KRT32Q14532 448 aa13.98□□□□□ -0.17
ATRX-214ENST00000624166 CCDC70Q6NSX1 233 aa13.98□□□□□ -0.17
ATRX-214ENST00000624166 MYRIPQ8NFW9 859 aa13.98□□□□□ -0.17
ATRX-214ENST00000624166 TTC12Q9H892 705 aaPredicted RBP13.98□□□□□ -0.17
ATRX-214ENST00000624166 MAP4K4O95819 1239 aaPredicted RBP13.98□□□□□ -0.17
ATRX-214ENST00000624166 C16orf45Q96MC5 204 aaPredicted RBP13.98□□□□□ -0.17
ATRX-214ENST00000624166 ZNF830Q96NB3 372 aaPredicted RBP13.98□□□□□ -0.17
ATRX-214ENST00000624166 ESYT1Q9BSJ8 1104 aa13.98□□□□□ -0.17
ATRX-214ENST00000624166 TSPYL1Q9H0U9 437 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms