RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 APBB1O00213 710 aa16.66■□□□□ 0.26
PCDHB17P-202ENST00000623466 PDCL3Q9H2J4 239 aa16.66■□□□□ 0.26
PCDHB17P-202ENST00000623466 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
PCDHB17P-202ENST00000623466 GRPEL1Q9HAV7 217 aa16.66■□□□□ 0.26
PCDHB17P-202ENST00000623466 TBX22Q9Y458 520 aa16.66■□□□□ 0.26
PCDHB17P-202ENST00000623466 KIF16BQ96L93 1317 aa16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 KDM4FA0A1W2PPD8 638 aa16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 ZNF853P0CG23 659 aa16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 TNPO1Q92973 898 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 MTHFSDQ2M296 383 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-202ENST00000623466 ANKRD45Q5TZF3 282 aa16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 CD2BP2O95400 341 aaKnown RBP16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 MRE11P49959 708 aa16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 EYA1Q99502 592 aa16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 TECPR2O15040 1411 aa16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 AATKQ6ZMQ8 1374 aa16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 ZBTB7BO15156 539 aaPredicted RBP16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 GAS2L3Q86XJ1 694 aa16.64■□□□□ 0.25
PCDHB17P-202ENST00000623466 USP6P35125 1406 aa16.63■□□□□ 0.25
PCDHB17P-202ENST00000623466 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
PCDHB17P-202ENST00000623466 CDC42BPGQ6DT37 1551 aa16.63■□□□□ 0.25
PCDHB17P-202ENST00000623466 DDX11L8A8MPP1 907 aa16.62■□□□□ 0.25
PCDHB17P-202ENST00000623466 NUCB1Q02818 461 aa16.62■□□□□ 0.25
PCDHB17P-202ENST00000623466 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
PCDHB17P-202ENST00000623466 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
PCDHB17P-202ENST00000623466 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
PCDHB17P-202ENST00000623466 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
PCDHB17P-202ENST00000623466 F6X3S4 739 aa16.6■□□□□ 0.25
PCDHB17P-202ENST00000623466 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
PCDHB17P-202ENST00000623466 CDK12Q9NYV4 1490 aaPredicted RBP16.6■□□□□ 0.25
PCDHB17P-202ENST00000623466 AKAP12Q02952 1782 aa16.6■□□□□ 0.25
PCDHB17P-202ENST00000623466 RBM25P49756 843 aaKnown RBP16.6■□□□□ 0.25
PCDHB17P-202ENST00000623466 DDIT3P35638 169 aa16.59■□□□□ 0.25
PCDHB17P-202ENST00000623466 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
PCDHB17P-202ENST00000623466 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
PCDHB17P-202ENST00000623466 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
PCDHB17P-202ENST00000623466 G2E3Q7L622 706 aa16.59■□□□□ 0.25
PCDHB17P-202ENST00000623466 KIF2CQ99661 725 aa16.59■□□□□ 0.25
PCDHB17P-202ENST00000623466 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.24
PCDHB17P-202ENST00000623466 CEP170BQ9Y4F5 1589 aaPredicted RBP16.58■□□□□ 0.24
PCDHB17P-202ENST00000623466 TSPYL4Q9UJ04 414 aa16.58■□□□□ 0.24
PCDHB17P-202ENST00000623466 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
PCDHB17P-202ENST00000623466 ESPNB1AK53 854 aa16.57■□□□□ 0.24
PCDHB17P-202ENST00000623466 CHL1O00533 1208 aa16.56■□□□□ 0.24
PCDHB17P-202ENST00000623466 C16orf71Q8IYS4 520 aaPredicted RBP16.56■□□□□ 0.24
PCDHB17P-202ENST00000623466 SNX21Q969T3 373 aa16.56■□□□□ 0.24
PCDHB17P-202ENST00000623466 ITSN1Q15811 1721 aa16.56■□□□□ 0.24
PCDHB17P-202ENST00000623466 OVOS2A0A0J9YW53 1432 aa16.56■□□□□ 0.24
PCDHB17P-202ENST00000623466 OVOS2Q6IE36 1432 aa16.56■□□□□ 0.24
PCDHB17P-202ENST00000623466 SSFA2P28290 1259 aa16.55■□□□□ 0.24
PCDHB17P-202ENST00000623466 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
PCDHB17P-202ENST00000623466 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
PCDHB17P-202ENST00000623466 RAB3GAP1Q15042 981 aa16.55■□□□□ 0.24
PCDHB17P-202ENST00000623466 TRIM44Q96DX7 344 aaPredicted RBP16.55■□□□□ 0.24
PCDHB17P-202ENST00000623466 GBP4Q96PP9 640 aa16.55■□□□□ 0.24
PCDHB17P-202ENST00000623466 ORAI2Q96SN7 254 aa16.55■□□□□ 0.24
PCDHB17P-202ENST00000623466 NCOA3Q9Y6Q9 1424 aa16.55■□□□□ 0.24
PCDHB17P-202ENST00000623466 TOPAZ1Q8N9V7 1692 aa16.54■□□□□ 0.24
PCDHB17P-202ENST00000623466 ANKLE2Q86XL3 938 aa16.54■□□□□ 0.24
PCDHB17P-202ENST00000623466 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
PCDHB17P-202ENST00000623466 TPM2P07951 284 aa16.54■□□□□ 0.24
PCDHB17P-202ENST00000623466 HOXC9P31274 260 aa16.54■□□□□ 0.24
PCDHB17P-202ENST00000623466 PSME1Q06323 249 aa16.54■□□□□ 0.24
PCDHB17P-202ENST00000623466 BMP2KLQ5H9B9 411 aa16.54■□□□□ 0.24
PCDHB17P-202ENST00000623466 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
PCDHB17P-202ENST00000623466 ZNF142P52746 1687 aaPredicted RBP16.53■□□□□ 0.24
PCDHB17P-202ENST00000623466 SMARCA5O60264 1052 aaPredicted RBP16.53■□□□□ 0.24
PCDHB17P-202ENST00000623466 MEIS3Q99687 375 aa16.53■□□□□ 0.24
PCDHB17P-202ENST00000623466 ARID3AQ99856 593 aa16.53■□□□□ 0.24
PCDHB17P-202ENST00000623466 ZHX1Q9UKY1 873 aaPredicted RBP16.53■□□□□ 0.24
PCDHB17P-202ENST00000623466 PHF8Q9UPP1 1060 aa16.53■□□□□ 0.24
PCDHB17P-202ENST00000623466 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
PCDHB17P-202ENST00000623466 RGPD8O14715 1765 aaPredicted RBP16.52■□□□□ 0.24
PCDHB17P-202ENST00000623466 OTUD7AQ8TE49 926 aaPredicted RBP16.52■□□□□ 0.24
PCDHB17P-202ENST00000623466 NRKQ7Z2Y5 1582 aa16.52■□□□□ 0.24
PCDHB17P-202ENST00000623466 K7ELQ4 463 aaPredicted RBP16.51■□□□□ 0.23
PCDHB17P-202ENST00000623466 API5Q9BZZ5 524 aaKnown RBP16.51■□□□□ 0.23
PCDHB17P-202ENST00000623466 ABCC4O15439 1325 aa16.51■□□□□ 0.23
PCDHB17P-202ENST00000623466 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 SSH2Q76I76 1423 aa16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 IL17REQ8NFR9 667 aa16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 FLT4P35916 1363 aa16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 SLIT1O75093 1534 aa16.5■□□□□ 0.23
PCDHB17P-202ENST00000623466 USP31Q70CQ4 1352 aa16.49■□□□□ 0.23
PCDHB17P-202ENST00000623466 PEAK1Q9H792 1746 aa16.49■□□□□ 0.23
PCDHB17P-202ENST00000623466 ARHGAP23Q9P227 1491 aa16.49■□□□□ 0.23
PCDHB17P-202ENST00000623466 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
PCDHB17P-202ENST00000623466 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
PCDHB17P-202ENST00000623466 AK9Q5TCS8 1911 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms