RNA–Protein interactions for RNA: ENST00000622698.4

PCDH11Y-207, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-207ENST00000622698 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
PCDH11Y-207ENST00000622698 BLMP54132 1417 aaPredicted RBP13.68□□□□□ -0.22
PCDH11Y-207ENST00000622698 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
PCDH11Y-207ENST00000622698 FAM196AQ6ZSG2 479 aa13.67□□□□□ -0.22
PCDH11Y-207ENST00000622698 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
PCDH11Y-207ENST00000622698 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
PCDH11Y-207ENST00000622698 EIF4A2Q14240 407 aaKnown RBP13.66□□□□□ -0.22
PCDH11Y-207ENST00000622698 GNAI3P08754 354 aa13.66□□□□□ -0.22
PCDH11Y-207ENST00000622698 FKBP8Q14318 412 aa13.66□□□□□ -0.22
PCDH11Y-207ENST00000622698 DDX19BQ9UMR2 479 aa13.66□□□□□ -0.22
PCDH11Y-207ENST00000622698 STK32BQ9NY57 414 aa13.65□□□□□ -0.22
PCDH11Y-207ENST00000622698 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
PCDH11Y-207ENST00000622698 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
PCDH11Y-207ENST00000622698 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
PCDH11Y-207ENST00000622698 ARHGEF25Q86VW2 580 aa13.65□□□□□ -0.22
PCDH11Y-207ENST00000622698 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
PCDH11Y-207ENST00000622698 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
PCDH11Y-207ENST00000622698 MPRIPQ6WCQ1 1025 aa13.64□□□□□ -0.23
PCDH11Y-207ENST00000622698 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
PCDH11Y-207ENST00000622698 POLD1P28340 1107 aa13.64□□□□□ -0.23
PCDH11Y-207ENST00000622698 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
PCDH11Y-207ENST00000622698 UBR1Q8IWV7 1749 aa13.63□□□□□ -0.23
PCDH11Y-207ENST00000622698 IQSEC2Q5JU85 1478 aa13.63□□□□□ -0.23
PCDH11Y-207ENST00000622698 CCT4P50991 539 aaKnown RBP13.63□□□□□ -0.23
PCDH11Y-207ENST00000622698 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
PCDH11Y-207ENST00000622698 PPLO60437 1756 aa13.62□□□□□ -0.23
PCDH11Y-207ENST00000622698 ERVV-2B6SEH9 535 aa13.62□□□□□ -0.23
PCDH11Y-207ENST00000622698 KCNJ4P48050 445 aa13.62□□□□□ -0.23
PCDH11Y-207ENST00000622698 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
PCDH11Y-207ENST00000622698 KIAA0232Q92628 1395 aa13.62□□□□□ -0.23
PCDH11Y-207ENST00000622698 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
PCDH11Y-207ENST00000622698 PPP1R1BQ9UD71 204 aaPredicted RBP13.61□□□□□ -0.23
PCDH11Y-207ENST00000622698 SOS2Q07890 1332 aaPredicted RBP13.61□□□□□ -0.23
PCDH11Y-207ENST00000622698 NOL10Q9BSC4 688 aaKnown RBP13.61□□□□□ -0.23
PCDH11Y-207ENST00000622698 FRAT2O75474 233 aaPredicted RBP13.6□□□□□ -0.23
PCDH11Y-207ENST00000622698 CCDC27Q2M243 656 aa13.6□□□□□ -0.23
PCDH11Y-207ENST00000622698 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
PCDH11Y-207ENST00000622698 CARD14Q9BXL6 1004 aa13.6□□□□□ -0.23
PCDH11Y-207ENST00000622698 EYA1Q99502 592 aa13.6□□□□□ -0.23
PCDH11Y-207ENST00000622698 DBF4Q9UBU7 674 aaPredicted RBP13.6□□□□□ -0.23
PCDH11Y-207ENST00000622698 ELL2O00472 640 aaPredicted RBP13.6□□□□□ -0.23
PCDH11Y-207ENST00000622698 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
PCDH11Y-207ENST00000622698 AFF2P51816 1311 aa13.59□□□□□ -0.23
PCDH11Y-207ENST00000622698 FAM98CQ17RN3 349 aaKnown RBP13.59□□□□□ -0.23
PCDH11Y-207ENST00000622698 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
PCDH11Y-207ENST00000622698 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
PCDH11Y-207ENST00000622698 HSPA1LP34931 641 aa13.59□□□□□ -0.23
PCDH11Y-207ENST00000622698 RFC4P35249 363 aa13.59□□□□□ -0.23
PCDH11Y-207ENST00000622698 ALDH1L2Q3SY69 923 aa13.58□□□□□ -0.24
PCDH11Y-207ENST00000622698 KRT27Q7Z3Y8 459 aa13.58□□□□□ -0.24
PCDH11Y-207ENST00000622698 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
PCDH11Y-207ENST00000622698 ZNF142P52746 1687 aaPredicted RBP13.58□□□□□ -0.24
PCDH11Y-207ENST00000622698 HOXB7P09629 217 aa13.58□□□□□ -0.24
PCDH11Y-207ENST00000622698 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDH11Y-207ENST00000622698 UBTFL1P0CB47 393 aaPredicted RBP13.57□□□□□ -0.24
PCDH11Y-207ENST00000622698 KIF1AQ12756 1690 aa13.57□□□□□ -0.24
PCDH11Y-207ENST00000622698 DDRGK1Q96HY6 314 aa13.57□□□□□ -0.24
PCDH11Y-207ENST00000622698 VPS72Q15906 364 aa13.57□□□□□ -0.24
PCDH11Y-207ENST00000622698 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
PCDH11Y-207ENST00000622698 ERC1Q8IUD2 1116 aa13.57□□□□□ -0.24
PCDH11Y-207ENST00000622698 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 AIMP1Q12904 312 aaKnown RBP13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 RTCBQ9Y3I0 505 aaKnown RBP13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 MCCP23508 829 aa13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 DDX17Q92841 729 aaKnown RBP13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 SRCIN1Q9C0H9 1055 aa13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 SUPT16HQ9Y5B9 1047 aaKnown RBP13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 MST1RQ04912 1400 aa13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 IL13P35225 146 aa13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
PCDH11Y-207ENST00000622698 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 VPS37DQ86XT2 251 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 PTCD1O75127 700 aaKnown RBP13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 LRRC7Q96NW7 1537 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 ST5P78524 1137 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 GNL3LQ9NVN8 582 aaKnown RBP13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 OVOS2A0A0J9YW53 1432 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 OVOS2Q6IE36 1432 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 AMOTL1Q8IY63 956 aa13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
PCDH11Y-207ENST00000622698 RNMTO43148 476 aaKnown RBP13.54□□□□□ -0.24
PCDH11Y-207ENST00000622698 DUSP27Q5VZP5 1158 aa13.54□□□□□ -0.24
PCDH11Y-207ENST00000622698 ITSN1Q15811 1721 aa13.54□□□□□ -0.24
PCDH11Y-207ENST00000622698 EXOSC9Q06265 439 aaKnown RBP13.54□□□□□ -0.24
PCDH11Y-207ENST00000622698 ERBB3P21860 1342 aa13.54□□□□□ -0.24
PCDH11Y-207ENST00000622698 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
PCDH11Y-207ENST00000622698 PTPRCP08575 1304 aa13.53□□□□□ -0.24
PCDH11Y-207ENST00000622698 CCNL1Q9UK58 526 aaPredicted RBP13.52□□□□□ -0.24
PCDH11Y-207ENST00000622698 ERBB4Q15303 1308 aa13.52□□□□□ -0.24
PCDH11Y-207ENST00000622698 CRB1P82279 1406 aa13.52□□□□□ -0.25
PCDH11Y-207ENST00000622698 KIAA1211Q6ZU35 1233 aa13.52□□□□□ -0.25
PCDH11Y-207ENST00000622698 ADGRB1O14514 1584 aa13.52□□□□□ -0.25
PCDH11Y-207ENST00000622698 CPSF1Q10570 1443 aaKnown RBP13.52□□□□□ -0.25
PCDH11Y-207ENST00000622698 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
PCDH11Y-207ENST00000622698 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
PCDH11Y-207ENST00000622698 APBA3O96018 575 aa13.51□□□□□ -0.25
PCDH11Y-207ENST00000622698 HSP90AA1P07900 732 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms