RNA–Protein interactions for RNA: ENST00000622277.4

SNX12-207, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 4 BASIC

Gene SNX12, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-207ENST00000622277 LRRC37A3O60309 1634 aa16.18■□□□□ 0.18
SNX12-207ENST00000622277 ABTB2Q8N961 1025 aa16.18■□□□□ 0.18
SNX12-207ENST00000622277 MCM10Q7L590 875 aa16.17■□□□□ 0.18
SNX12-207ENST00000622277 ELL2O00472 640 aaPredicted RBP16.17■□□□□ 0.18
SNX12-207ENST00000622277 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
SNX12-207ENST00000622277 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
SNX12-207ENST00000622277 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
SNX12-207ENST00000622277 NUTM2GQ5VZR2 741 aa16.16■□□□□ 0.18
SNX12-207ENST00000622277 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
SNX12-207ENST00000622277 SMC5Q8IY18 1101 aa16.16■□□□□ 0.18
SNX12-207ENST00000622277 HAP1P54257 671 aaPredicted RBP16.16■□□□□ 0.18
SNX12-207ENST00000622277 LTN1O94822 1766 aa16.16■□□□□ 0.18
SNX12-207ENST00000622277 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
SNX12-207ENST00000622277 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
SNX12-207ENST00000622277 API5Q9BZZ5 524 aaKnown RBP16.15■□□□□ 0.18
SNX12-207ENST00000622277 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
SNX12-207ENST00000622277 HTATSF1O43719 755 aaKnown RBP16.14■□□□□ 0.17
SNX12-207ENST00000622277 FOXO3O43524 673 aa16.14■□□□□ 0.17
SNX12-207ENST00000622277 RGS12O14924 1447 aa16.12■□□□□ 0.17
SNX12-207ENST00000622277 ESCO1Q5FWF5 840 aa16.12■□□□□ 0.17
SNX12-207ENST00000622277 RTF1Q92541 710 aaKnown RBP16.12■□□□□ 0.17
SNX12-207ENST00000622277 ANO8Q9HCE9 1232 aaPredicted RBP16.12■□□□□ 0.17
SNX12-207ENST00000622277 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
SNX12-207ENST00000622277 SLIT3O75094 1523 aa16.11■□□□□ 0.17
SNX12-207ENST00000622277 IP6K1Q92551 441 aa16.11■□□□□ 0.17
SNX12-207ENST00000622277 USP19O94966 1318 aa16.11■□□□□ 0.17
SNX12-207ENST00000622277 KIF1AQ12756 1690 aa16.1■□□□□ 0.17
SNX12-207ENST00000622277 TRPM3Q9HCF6 1732 aaPredicted RBP16.1■□□□□ 0.17
SNX12-207ENST00000622277 PSME1Q06323 249 aa16.1■□□□□ 0.17
SNX12-207ENST00000622277 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
SNX12-207ENST00000622277 MSH6P52701 1360 aa16.09■□□□□ 0.17
SNX12-207ENST00000622277 NUCB1Q02818 461 aa16.09■□□□□ 0.17
SNX12-207ENST00000622277 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
SNX12-207ENST00000622277 KCNH5Q8NCM2 988 aa16.09■□□□□ 0.17
SNX12-207ENST00000622277 MAP3K5Q99683 1374 aa16.08■□□□□ 0.17
SNX12-207ENST00000622277 PTPRCP08575 1304 aa16.08■□□□□ 0.16
SNX12-207ENST00000622277 GSE1Q14687 1217 aa16.08■□□□□ 0.16
SNX12-207ENST00000622277 NFKBIBQ15653 356 aa16.08■□□□□ 0.16
SNX12-207ENST00000622277 TSPYL4Q9UJ04 414 aa16.08■□□□□ 0.16
SNX12-207ENST00000622277 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
SNX12-207ENST00000622277 SEC24BO95487 1268 aa16.07■□□□□ 0.16
SNX12-207ENST00000622277 ORAI2Q96SN7 254 aa16.07■□□□□ 0.16
SNX12-207ENST00000622277 MST1RQ04912 1400 aa16.07■□□□□ 0.16
SNX12-207ENST00000622277 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
SNX12-207ENST00000622277 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
SNX12-207ENST00000622277 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
SNX12-207ENST00000622277 LTV1Q96GA3 475 aaPredicted RBP16.06■□□□□ 0.16
SNX12-207ENST00000622277 BABAM1Q9NWV8 329 aa16.06■□□□□ 0.16
SNX12-207ENST00000622277 MIS18AQ9NYP9 233 aa16.06■□□□□ 0.16
SNX12-207ENST00000622277 NCAPD2Q15021 1401 aa16.05■□□□□ 0.16
SNX12-207ENST00000622277 SIRT2Q8IXJ6 389 aa16.05■□□□□ 0.16
SNX12-207ENST00000622277 C1orf115Q9H7X2 142 aa16.05■□□□□ 0.16
SNX12-207ENST00000622277 MED1Q15648 1581 aaPredicted RBP16.05■□□□□ 0.16
SNX12-207ENST00000622277 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
SNX12-207ENST00000622277 CHD1LQ86WJ1 897 aa16.04■□□□□ 0.16
SNX12-207ENST00000622277 SOS1Q07889 1333 aaPredicted RBP16.04■□□□□ 0.16
SNX12-207ENST00000622277 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
SNX12-207ENST00000622277 CAMTA1Q9Y6Y1 1673 aa16.03■□□□□ 0.16
SNX12-207ENST00000622277 SLC4A3P48751 1232 aa16.03■□□□□ 0.16
SNX12-207ENST00000622277 USHBP1Q8N6Y0 703 aa16.03■□□□□ 0.16
SNX12-207ENST00000622277 ATP10DQ9P241 1426 aa16.02■□□□□ 0.16
SNX12-207ENST00000622277 CEMIPQ8WUJ3 1361 aa16.02■□□□□ 0.16
SNX12-207ENST00000622277 NBPF6Q5VWK0 638 aa16.02■□□□□ 0.16
SNX12-207ENST00000622277 ARHGEF25Q86VW2 580 aa16.02■□□□□ 0.16
SNX12-207ENST00000622277 NBPF4Q96M43 638 aa16.02■□□□□ 0.16
SNX12-207ENST00000622277 C19orf44Q9H6X5 657 aa16.02■□□□□ 0.16
SNX12-207ENST00000622277 RGPD2P0DJD1 1756 aa16.02■□□□□ 0.15
SNX12-207ENST00000622277 LMO7Q8WWI1 1683 aa16.02■□□□□ 0.15
SNX12-207ENST00000622277 ALS2Q96Q42 1657 aa16.02■□□□□ 0.15
SNX12-207ENST00000622277 DCCP43146 1447 aa16.01■□□□□ 0.15
SNX12-207ENST00000622277 NCOA3Q9Y6Q9 1424 aa16.01■□□□□ 0.15
SNX12-207ENST00000622277 GCP02774 474 aa16.01■□□□□ 0.15
SNX12-207ENST00000622277 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
SNX12-207ENST00000622277 LNPKQ9C0E8 428 aa16.01■□□□□ 0.15
SNX12-207ENST00000622277 STRCP1A6NGW2 1772 aa16.01■□□□□ 0.15
SNX12-207ENST00000622277 TBC1D32Q96NH3 1257 aa16■□□□□ 0.15
SNX12-207ENST00000622277 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
SNX12-207ENST00000622277 UPF2Q9HAU5 1272 aaKnown RBP16■□□□□ 0.15
SNX12-207ENST00000622277 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
SNX12-207ENST00000622277 XPCQ01831 940 aaPredicted RBP15.99■□□□□ 0.15
SNX12-207ENST00000622277 KRT28Q7Z3Y7 464 aa15.99■□□□□ 0.15
SNX12-207ENST00000622277 ANKRD44Q8N8A2 993 aa15.99■□□□□ 0.15
SNX12-207ENST00000622277 G2E3Q7L622 706 aa15.98■□□□□ 0.15
SNX12-207ENST00000622277 KDM3BQ7LBC6 1761 aa15.98■□□□□ 0.15
SNX12-207ENST00000622277 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
SNX12-207ENST00000622277 ANKRD45Q5TZF3 282 aa15.98■□□□□ 0.15
SNX12-207ENST00000622277 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
SNX12-207ENST00000622277 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
SNX12-207ENST00000622277 RPAP2Q8IXW5 612 aaPredicted RBP15.97■□□□□ 0.15
SNX12-207ENST00000622277 STK31Q9BXU1 1019 aa15.97■□□□□ 0.15
SNX12-207ENST00000622277 DCTPP1Q9H773 170 aa15.97■□□□□ 0.15
SNX12-207ENST00000622277 CCT4P50991 539 aaKnown RBP15.96■□□□□ 0.15
SNX12-207ENST00000622277 BMP2KLQ5H9B9 411 aa15.96■□□□□ 0.15
SNX12-207ENST00000622277 LRRC59Q96AG4 307 aaKnown RBP15.96■□□□□ 0.15
SNX12-207ENST00000622277 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.15
SNX12-207ENST00000622277 CACNA1FO60840 1977 aa15.96■□□□□ 0.15
SNX12-207ENST00000622277 ZBTB7CA1YPR0 619 aa15.96■□□□□ 0.15
SNX12-207ENST00000622277 CEP85Q6P2H3 762 aa15.96■□□□□ 0.15
SNX12-207ENST00000622277 OVOS2A0A0G2JMS6 1433 aa15.96■□□□□ 0.14
SNX12-207ENST00000622277 MEIS3Q99687 375 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms