RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FRAT2O75474 233 aaPredicted RBP11.84□□□□□ -0.51
PDPN-212ENST00000621990 GSE1Q14687 1217 aa11.84□□□□□ -0.51
PDPN-212ENST00000621990 PTPRCP08575 1304 aa11.84□□□□□ -0.51
PDPN-212ENST00000621990 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
PDPN-212ENST00000621990 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
PDPN-212ENST00000621990 MCM10Q7L590 875 aa11.83□□□□□ -0.52
PDPN-212ENST00000621990 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
PDPN-212ENST00000621990 MFAP1P55081 439 aaKnown RBP11.82□□□□□ -0.52
PDPN-212ENST00000621990 CHD2O14647 1828 aaKnown RBP11.82□□□□□ -0.52
PDPN-212ENST00000621990 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
PDPN-212ENST00000621990 ZNF142P52746 1687 aaPredicted RBP11.82□□□□□ -0.52
PDPN-212ENST00000621990 MTHFSDQ2M296 383 aaKnown RBP11.81□□□□□ -0.52
PDPN-212ENST00000621990 NGDNQ8NEJ9 315 aaKnown RBP11.81□□□□□ -0.52
PDPN-212ENST00000621990 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
PDPN-212ENST00000621990 NCOA3Q9Y6Q9 1424 aa11.81□□□□□ -0.52
PDPN-212ENST00000621990 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
PDPN-212ENST00000621990 KRT24Q2M2I5 525 aa11.81□□□□□ -0.52
PDPN-212ENST00000621990 N4BP2Q86UW6 1770 aaPredicted RBP11.8□□□□□ -0.52
PDPN-212ENST00000621990 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
PDPN-212ENST00000621990 EYA1Q99502 592 aa11.8□□□□□ -0.52
PDPN-212ENST00000621990 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
PDPN-212ENST00000621990 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
PDPN-212ENST00000621990 KCNA6P17658 529 aa11.8□□□□□ -0.52
PDPN-212ENST00000621990 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
PDPN-212ENST00000621990 RPAP2Q8IXW5 612 aaPredicted RBP11.79□□□□□ -0.52
PDPN-212ENST00000621990 SNX21Q969T3 373 aa11.79□□□□□ -0.52
PDPN-212ENST00000621990 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
PDPN-212ENST00000621990 CACNA1FO60840 1977 aa11.79□□□□□ -0.52
PDPN-212ENST00000621990 MSH6P52701 1360 aa11.79□□□□□ -0.52
PDPN-212ENST00000621990 PHRF1Q9P1Y6 1649 aaKnown RBP11.78□□□□□ -0.52
PDPN-212ENST00000621990 FOXO3O43524 673 aa11.78□□□□□ -0.52
PDPN-212ENST00000621990 AMPHP49418 695 aa11.78□□□□□ -0.52
PDPN-212ENST00000621990 HOXC9P31274 260 aa11.78□□□□□ -0.52
PDPN-212ENST00000621990 CEP85Q6P2H3 762 aa11.78□□□□□ -0.52
PDPN-212ENST00000621990 LTN1O94822 1766 aa11.78□□□□□ -0.52
PDPN-212ENST00000621990 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.52
PDPN-212ENST00000621990 SOX12O15370 315 aa11.77□□□□□ -0.52
PDPN-212ENST00000621990 TBC1D9Q6ZT07 1266 aa11.77□□□□□ -0.52
PDPN-212ENST00000621990 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.52
PDPN-212ENST00000621990 DDIT3P35638 169 aa11.77□□□□□ -0.53
PDPN-212ENST00000621990 PLEKHM2Q8IWE5 1019 aa11.77□□□□□ -0.53
PDPN-212ENST00000621990 KIF2CQ99661 725 aa11.77□□□□□ -0.53
PDPN-212ENST00000621990 NFAT5O94916 1531 aa11.77□□□□□ -0.53
PDPN-212ENST00000621990 NLRP6P59044 892 aa11.76□□□□□ -0.53
PDPN-212ENST00000621990 BABAM1Q9NWV8 329 aa11.76□□□□□ -0.53
PDPN-212ENST00000621990 TSPYL4Q9UJ04 414 aa11.76□□□□□ -0.53
PDPN-212ENST00000621990 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
PDPN-212ENST00000621990 EIF5BO60841 1220 aaKnown RBP11.75□□□□□ -0.53
PDPN-212ENST00000621990 GSPT1P15170 499 aaKnown RBP11.75□□□□□ -0.53
PDPN-212ENST00000621990 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
PDPN-212ENST00000621990 CDC45O75419 566 aa11.75□□□□□ -0.53
PDPN-212ENST00000621990 MAP3K5Q99683 1374 aa11.74□□□□□ -0.53
PDPN-212ENST00000621990 GNAT3A8MTJ3 354 aa11.74□□□□□ -0.53
PDPN-212ENST00000621990 CCT4P50991 539 aaKnown RBP11.74□□□□□ -0.53
PDPN-212ENST00000621990 TTC22Q5TAA0 569 aa11.74□□□□□ -0.53
PDPN-212ENST00000621990 HSCBQ8IWL3 235 aa11.74□□□□□ -0.53
PDPN-212ENST00000621990 MEIS3Q99687 375 aa11.74□□□□□ -0.53
PDPN-212ENST00000621990 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
PDPN-212ENST00000621990 CHMP5Q9NZZ3 219 aa11.74□□□□□ -0.53
PDPN-212ENST00000621990 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
PDPN-212ENST00000621990 PXDNLA1KZ92 1463 aa11.74□□□□□ -0.53
PDPN-212ENST00000621990 ADGRL3Q9HAR2 1447 aa11.73□□□□□ -0.53
PDPN-212ENST00000621990 PLPPR3Q6T4P5 718 aa11.73□□□□□ -0.53
PDPN-212ENST00000621990 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
PDPN-212ENST00000621990 G2E3Q7L622 706 aa11.73□□□□□ -0.53
PDPN-212ENST00000621990 TUBGCP6Q96RT7 1819 aa11.73□□□□□ -0.53
PDPN-212ENST00000621990 ADAMTSL3P82987 1691 aa11.72□□□□□ -0.53
PDPN-212ENST00000621990 KCNA4P22459 653 aa11.72□□□□□ -0.53
PDPN-212ENST00000621990 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
PDPN-212ENST00000621990 CEMIPQ8WUJ3 1361 aa11.72□□□□□ -0.53
PDPN-212ENST00000621990 KDM3BQ7LBC6 1761 aa11.71□□□□□ -0.53
PDPN-212ENST00000621990 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.53
PDPN-212ENST00000621990 IL17REQ8NFR9 667 aa11.71□□□□□ -0.53
PDPN-212ENST00000621990 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.53
PDPN-212ENST00000621990 MCM4P33991 863 aa11.71□□□□□ -0.54
PDPN-212ENST00000621990 CCDC30Q5VVM6 783 aa11.71□□□□□ -0.54
PDPN-212ENST00000621990 HMMRO75330 724 aa11.7□□□□□ -0.54
PDPN-212ENST00000621990 IP6K1Q92551 441 aa11.7□□□□□ -0.54
PDPN-212ENST00000621990 STK31Q9BXU1 1019 aa11.7□□□□□ -0.54
PDPN-212ENST00000621990 OSBPL3Q9H4L5 887 aa11.7□□□□□ -0.54
PDPN-212ENST00000621990 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
PDPN-212ENST00000621990 NCAPD2Q15021 1401 aa11.7□□□□□ -0.54
PDPN-212ENST00000621990 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
PDPN-212ENST00000621990 SLIT3O75094 1523 aa11.69□□□□□ -0.54
PDPN-212ENST00000621990 FLIIQ13045 1269 aa11.69□□□□□ -0.54
PDPN-212ENST00000621990 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
PDPN-212ENST00000621990 NUTM2GQ5VZR2 741 aa11.69□□□□□ -0.54
PDPN-212ENST00000621990 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
PDPN-212ENST00000621990 F6X3S4 739 aa11.69□□□□□ -0.54
PDPN-212ENST00000621990 OTUD7AQ8TE49 926 aaPredicted RBP11.69□□□□□ -0.54
PDPN-212ENST00000621990 CAMTA1Q9Y6Y1 1673 aa11.69□□□□□ -0.54
PDPN-212ENST00000621990 GNAI2P04899 355 aa11.68□□□□□ -0.54
PDPN-212ENST00000621990 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
PDPN-212ENST00000621990 RGPD2P0DJD1 1756 aa11.68□□□□□ -0.54
PDPN-212ENST00000621990 SALL3Q9BXA9 1300 aa11.67□□□□□ -0.54
PDPN-212ENST00000621990 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
PDPN-212ENST00000621990 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
PDPN-212ENST00000621990 SDSP20132 328 aa11.67□□□□□ -0.54
PDPN-212ENST00000621990 GNAI3P08754 354 aa11.67□□□□□ -0.54
PDPN-212ENST00000621990 SLC4A10Q6U841 1118 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms