RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ALDH1L2Q3SY69 923 aa10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 NME9Q86XW9 330 aa10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 DCTN1Q14203 1278 aa10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 CHMP4AQ9BY43 222 aa10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 BICDL1Q6ZP65 573 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 CAMSAP1Q5T5Y3 1602 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 VIRMAQ69YN4 1812 aaKnown RBP10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 GNAI1P63096 354 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 TWISTNBQ3B726 338 aaPredicted RBP10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 MIS18AQ9NYP9 233 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 NEXMIFQ5QGS0 1516 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 FAM83GA6ND36 823 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 SF3A1Q15459 793 aaKnown RBP10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 DIAPH3Q9NSV4 1193 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 IFIT2P09913 472 aaKnown RBP10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 MYL6BP14649 208 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 ANO2Q9NQ90 1003 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 HDAC5Q9UQL6 1122 aa10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
PTPDC1-204ENST00000620992 ZMYM3Q14202 1370 aa10.09□□□□□ -0.79
PTPDC1-204ENST00000620992 FAM43AQ8N2R8 423 aa10.09□□□□□ -0.79
PTPDC1-204ENST00000620992 ARHGEF28Q8N1W1 1705 aaKnown RBP10.09□□□□□ -0.79
PTPDC1-204ENST00000620992 VAMP4O75379 141 aa10.09□□□□□ -0.79
PTPDC1-204ENST00000620992 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
PTPDC1-204ENST00000620992 PANK2Q9BZ23 570 aa10.09□□□□□ -0.79
PTPDC1-204ENST00000620992 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
PTPDC1-204ENST00000620992 G3BP1Q13283 466 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 ANKLE2Q86XL3 938 aa10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 DDX11L8A8MPP1 907 aa10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 ZBTB7BO15156 539 aaPredicted RBP10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 XRCC6P12956 609 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 MRPL50Q8N5N7 158 aaKnown RBP10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 USHBP1Q8N6Y0 703 aa10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 GCC1Q96CN9 775 aa10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 SIL1Q9H173 461 aa10.08□□□□□ -0.8
PTPDC1-204ENST00000620992 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
PTPDC1-204ENST00000620992 SIGLEC1Q9BZZ2 1709 aa10.07□□□□□ -0.8
PTPDC1-204ENST00000620992 BMP2KLQ5H9B9 411 aa10.07□□□□□ -0.8
PTPDC1-204ENST00000620992 ADGRB2O60241 1585 aa10.07□□□□□ -0.8
PTPDC1-204ENST00000620992 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 ZNF530Q6P9A1 599 aaPredicted RBP10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 GBP4Q96PP9 640 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 ATP2B1P20020 1258 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 CFAP74Q9C0B2 1584 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 PTPRMP28827 1452 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 NRDCO43847 1150 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 TNPO1Q92973 898 aaKnown RBP10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 API5Q9BZZ5 524 aaKnown RBP10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
PTPDC1-204ENST00000620992 COL3A1P02461 1466 aaPredicted RBP10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 SURF6O75683 361 aaKnown RBP10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 FAM184AQ8NB25 1140 aa10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 ZFYVE9O95405 1425 aa10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 PIK3C2BO00750 1634 aa10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 H3BQV1 296 aa10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 KRT24Q2M2I5 525 aa10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
PTPDC1-204ENST00000620992 CD163L1Q9NR16 1453 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 NUDT16Q96DE0 195 aaKnown RBP10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 RRAGDQ9NQL2 400 aaPredicted RBP10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 PPIP5K1Q6PFW1 1433 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 WASLO00401 505 aaPredicted RBP10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 ZNF219Q9P2Y4 722 aaPredicted RBP10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 LRRC7Q96NW7 1537 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 CDC45O75419 566 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 IL13P35225 146 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 PNPLA6Q8IY17 1366 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 CD2BP2O95400 341 aaKnown RBP10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 HSPA2P54652 639 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 AKAP17AQ02040 695 aaKnown RBP10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
PTPDC1-204ENST00000620992 NEO1Q92859 1461 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 ARHGAP31Q2M1Z3 1444 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 AEBP1Q8IUX7 1158 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 NOL10Q9BSC4 688 aaKnown RBP10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 SLC4A2P04920 1241 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 UBTFL1P0CB47 393 aaPredicted RBP10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 SF3B2Q13435 895 aaKnown RBP10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 HDGFL1Q5TGJ6 251 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 MCM10Q7L590 875 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 ARHGAP45Q92619 1136 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 DIP2CQ9Y2E4 1556 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 MRE11P49959 708 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 DNAJC2Q99543 621 aaKnown RBP10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 FAM135BQ49AJ0 1406 aa10.03□□□□□ -0.8
PTPDC1-204ENST00000620992 GOLGA6L6A8MZA4 724 aa10.02□□□□□ -0.8
PTPDC1-204ENST00000620992 CPLX1O14810 134 aa10.02□□□□□ -0.8
PTPDC1-204ENST00000620992 CTDP1Q9Y5B0 961 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms