RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ZRANB1Q9UGI0 708 aa24.11■■□□□ 1.45
PDLIM3-212ENST00000620787 SDSP20132 328 aa24.11■■□□□ 1.45
PDLIM3-212ENST00000620787 MON2Q7Z3U7 1717 aa24.11■■□□□ 1.45
PDLIM3-212ENST00000620787 CWC22Q9HCG8 908 aaKnown RBP24.1■■□□□ 1.45
PDLIM3-212ENST00000620787 FBXO31Q5XUX0 539 aaPredicted RBP24.1■■□□□ 1.45
PDLIM3-212ENST00000620787 CEP85Q6P2H3 762 aa24.1■■□□□ 1.45
PDLIM3-212ENST00000620787 RPAP2Q8IXW5 612 aaPredicted RBP24.09■■□□□ 1.45
PDLIM3-212ENST00000620787 MSH6P52701 1360 aa24.08■■□□□ 1.45
PDLIM3-212ENST00000620787 NCLP19338 710 aaKnown RBP24.08■■□□□ 1.44
PDLIM3-212ENST00000620787 KIAA1211Q6ZU35 1233 aa24.08■■□□□ 1.44
PDLIM3-212ENST00000620787 ZGPATQ8N5A5 531 aaKnown RBP24.08■■□□□ 1.44
PDLIM3-212ENST00000620787 NRKQ7Z2Y5 1582 aa24.08■■□□□ 1.44
PDLIM3-212ENST00000620787 CPS1P31327 1500 aa24.08■■□□□ 1.44
PDLIM3-212ENST00000620787 RTL1A6NKG5 1358 aa24.07■■□□□ 1.44
PDLIM3-212ENST00000620787 SMARCA5O60264 1052 aaPredicted RBP24.07■■□□□ 1.44
PDLIM3-212ENST00000620787 ST18O60284 1047 aa24.07■■□□□ 1.44
PDLIM3-212ENST00000620787 OFD1O75665 1012 aa24.07■■□□□ 1.44
PDLIM3-212ENST00000620787 RBSNQ9H1K0 784 aa24.07■■□□□ 1.44
PDLIM3-212ENST00000620787 ZDHHC9Q9Y397 364 aa24.07■■□□□ 1.44
PDLIM3-212ENST00000620787 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
PDLIM3-212ENST00000620787 CASC1Q6TDU7 716 aa24.06■■□□□ 1.44
PDLIM3-212ENST00000620787 C3P01024 1663 aa24.05■■□□□ 1.44
PDLIM3-212ENST00000620787 AKAP12Q02952 1782 aa24.05■■□□□ 1.44
PDLIM3-212ENST00000620787 GPT2Q8TD30 523 aa24.05■■□□□ 1.44
PDLIM3-212ENST00000620787 MSNP26038 577 aaKnown RBP24.05■■□□□ 1.44
PDLIM3-212ENST00000620787 KRT24Q2M2I5 525 aa24.05■■□□□ 1.44
PDLIM3-212ENST00000620787 HS1BP3Q53T59 392 aa24.05■■□□□ 1.44
PDLIM3-212ENST00000620787 PDLIM2Q96JY6 352 aa24.05■■□□□ 1.44
PDLIM3-212ENST00000620787 PRPF40AO75400 957 aaKnown RBP24.03■■□□□ 1.44
PDLIM3-212ENST00000620787 PRIM1P49642 420 aaKnown RBP24.03■■□□□ 1.44
PDLIM3-212ENST00000620787 REC8O95072 547 aa24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 COG3Q96JB2 828 aa24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 TUBGCP6Q96RT7 1819 aa24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 APBB1O00213 710 aa24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 WASLO00401 505 aaPredicted RBP24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 MEIS3Q99687 375 aa24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 RBM27Q9P2N5 1060 aaKnown RBP24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 STAG3Q9UJ98 1225 aa24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 ITSN1Q15811 1721 aa24.02■■□□□ 1.44
PDLIM3-212ENST00000620787 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.01■■□□□ 1.43
PDLIM3-212ENST00000620787 KIAA0232Q92628 1395 aa24■■□□□ 1.43
PDLIM3-212ENST00000620787 CHL1O00533 1208 aa24■■□□□ 1.43
PDLIM3-212ENST00000620787 ERC2O15083 957 aa24■■□□□ 1.43
PDLIM3-212ENST00000620787 A2ML1A8K2U0 1454 aa24■■□□□ 1.43
PDLIM3-212ENST00000620787 PTPRCP08575 1304 aa24■■□□□ 1.43
PDLIM3-212ENST00000620787 HAP1P54257 671 aaPredicted RBP24■■□□□ 1.43
PDLIM3-212ENST00000620787 NOL7Q9UMY1 257 aaKnown RBP23.99■■□□□ 1.43
PDLIM3-212ENST00000620787 AEBP1Q8IUX7 1158 aa23.99■■□□□ 1.43
PDLIM3-212ENST00000620787 VSIG10Q8N0Z9 540 aa23.99■■□□□ 1.43
PDLIM3-212ENST00000620787 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.99■■□□□ 1.43
PDLIM3-212ENST00000620787 NRXN3Q9Y4C0 1643 aa23.98■■□□□ 1.43
PDLIM3-212ENST00000620787 TERF1P54274 439 aa23.97■■□□□ 1.43
PDLIM3-212ENST00000620787 CHAMP1Q96JM3 812 aa23.97■■□□□ 1.43
PDLIM3-212ENST00000620787 TMEM63CQ9P1W3 806 aa23.97■■□□□ 1.43
PDLIM3-212ENST00000620787 OSBPL3Q9H4L5 887 aa23.96■■□□□ 1.43
PDLIM3-212ENST00000620787 ZNF500O60304 480 aaPredicted RBP23.96■■□□□ 1.43
PDLIM3-212ENST00000620787 LRSAM1Q6UWE0 723 aa23.96■■□□□ 1.43
PDLIM3-212ENST00000620787 NUDT16Q96DE0 195 aaKnown RBP23.96■■□□□ 1.43
PDLIM3-212ENST00000620787 NCKAP5LQ9HCH0 1330 aa23.96■■□□□ 1.43
PDLIM3-212ENST00000620787 NSFL1CQ9UNZ2 370 aaKnown RBP23.95■■□□□ 1.42
PDLIM3-212ENST00000620787 EIF4A2Q14240 407 aaKnown RBP23.94■■□□□ 1.42
PDLIM3-212ENST00000620787 SULT6B1Q6IMI4 303 aa23.94■■□□□ 1.42
PDLIM3-212ENST00000620787 MCM10Q7L590 875 aa23.94■■□□□ 1.42
PDLIM3-212ENST00000620787 PDCL3Q9H2J4 239 aa23.94■■□□□ 1.42
PDLIM3-212ENST00000620787 PDE1AP54750 535 aa23.94■■□□□ 1.42
PDLIM3-212ENST00000620787 RGPD1P0DJD0 1748 aa23.93■■□□□ 1.42
PDLIM3-212ENST00000620787 HMMRO75330 724 aa23.93■■□□□ 1.42
PDLIM3-212ENST00000620787 TMX3Q96JJ7 454 aa23.93■■□□□ 1.42
PDLIM3-212ENST00000620787 SYCE3A1L190 88 aa23.92■■□□□ 1.42
PDLIM3-212ENST00000620787 NEK4P51957 841 aa23.91■■□□□ 1.42
PDLIM3-212ENST00000620787 CRB1P82279 1406 aa23.91■■□□□ 1.42
PDLIM3-212ENST00000620787 SPATA31D1Q6ZQQ2 1576 aa23.91■■□□□ 1.42
PDLIM3-212ENST00000620787 CCDC61Q9Y6R9 512 aa23.91■■□□□ 1.42
PDLIM3-212ENST00000620787 ZMYND15Q9H091 742 aa23.91■■□□□ 1.42
PDLIM3-212ENST00000620787 SLC4A2P04920 1241 aa23.9■■□□□ 1.42
PDLIM3-212ENST00000620787 ZKSCAN5Q9Y2L8 839 aa23.9■■□□□ 1.42
PDLIM3-212ENST00000620787 METP08581 1390 aa23.9■■□□□ 1.42
PDLIM3-212ENST00000620787 PEAK1Q9H792 1746 aa23.9■■□□□ 1.42
PDLIM3-212ENST00000620787 FOXD4L5Q5VV16 416 aaPredicted RBP23.89■■□□□ 1.42
PDLIM3-212ENST00000620787 FOXD4L4Q8WXT5 416 aaPredicted RBP23.89■■□□□ 1.42
PDLIM3-212ENST00000620787 SALL3Q9BXA9 1300 aa23.89■■□□□ 1.42
PDLIM3-212ENST00000620787 BRD1O95696 1058 aa23.89■■□□□ 1.41
PDLIM3-212ENST00000620787 MBD3O95983 291 aa23.89■■□□□ 1.41
PDLIM3-212ENST00000620787 R3HCC1Q9Y3T6 440 aaKnown RBP23.89■■□□□ 1.41
PDLIM3-212ENST00000620787 XPCQ01831 940 aaPredicted RBP23.88■■□□□ 1.41
PDLIM3-212ENST00000620787 CUL4AQ13619 759 aa23.88■■□□□ 1.41
PDLIM3-212ENST00000620787 TXNDC2Q86VQ3 553 aa23.88■■□□□ 1.41
PDLIM3-212ENST00000620787 MCM2P49736 904 aa23.87■■□□□ 1.41
PDLIM3-212ENST00000620787 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.87■■□□□ 1.41
PDLIM3-212ENST00000620787 ESYT1Q9BSJ8 1104 aa23.87■■□□□ 1.41
PDLIM3-212ENST00000620787 G2E3Q7L622 706 aa23.87■■□□□ 1.41
PDLIM3-212ENST00000620787 NALCNQ8IZF0 1738 aa23.86■■□□□ 1.41
PDLIM3-212ENST00000620787 MCM5P33992 734 aa23.86■■□□□ 1.41
PDLIM3-212ENST00000620787 PKNOX2Q96KN3 472 aa23.86■■□□□ 1.41
PDLIM3-212ENST00000620787 PALD1Q9ULE6 856 aa23.86■■□□□ 1.41
PDLIM3-212ENST00000620787 PRR36Q9H6K5 1346 aa23.86■■□□□ 1.41
PDLIM3-212ENST00000620787 F6X3S4 739 aa23.85■■□□□ 1.41
PDLIM3-212ENST00000620787 TSHZ3Q63HK5 1081 aa23.85■■□□□ 1.41
PDLIM3-212ENST00000620787 CCT4P50991 539 aaKnown RBP23.85■■□□□ 1.41
PDLIM3-212ENST00000620787 CCDC39Q9UFE4 941 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms