RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
SRGAP3-213ENST00000618999 CCDC82Q8N4S0 544 aa8.77□□□□□ -1
SRGAP3-213ENST00000618999 ZNF335Q9H4Z2 1342 aaPredicted RBP8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 RIPK4P57078 832 aa8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 PANK1Q8TE04 598 aa8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 TRIM44Q96DX7 344 aaPredicted RBP8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 USP32Q8NFA0 1604 aa8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 MSH6P52701 1360 aa8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 FCHSD2O94868 740 aa8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 ADGRB2O60241 1585 aa8.77□□□□□ -1.01
SRGAP3-213ENST00000618999 MAP3K19Q56UN5 1328 aa8.76□□□□□ -1.01
SRGAP3-213ENST00000618999 IGSF3O75054 1194 aa8.76□□□□□ -1.01
SRGAP3-213ENST00000618999 HSCBQ8IWL3 235 aa8.76□□□□□ -1.01
SRGAP3-213ENST00000618999 ANP32BQ92688 251 aaKnown RBP8.76□□□□□ -1.01
SRGAP3-213ENST00000618999 SULT6B1Q6IMI4 303 aa8.76□□□□□ -1.01
SRGAP3-213ENST00000618999 AATKQ6ZMQ8 1374 aa8.76□□□□□ -1.01
SRGAP3-213ENST00000618999 CAPN15O75808 1086 aa8.76□□□□□ -1.01
SRGAP3-213ENST00000618999 DDX17Q92841 729 aaKnown RBP8.76□□□□□ -1.01
SRGAP3-213ENST00000618999 IL13P35225 146 aa8.75□□□□□ -1.01
SRGAP3-213ENST00000618999 TMPOP42166 694 aaKnown RBP8.75□□□□□ -1.01
SRGAP3-213ENST00000618999 AAMPQ13685 434 aa8.75□□□□□ -1.01
SRGAP3-213ENST00000618999 EIF4A2Q14240 407 aaKnown RBP8.75□□□□□ -1.01
SRGAP3-213ENST00000618999 CHD2O14647 1828 aaKnown RBP8.75□□□□□ -1.01
SRGAP3-213ENST00000618999 SPINK5Q9NQ38 1064 aaPredicted RBP8.74□□□□□ -1.01
SRGAP3-213ENST00000618999 MFAP1P55081 439 aaKnown RBP8.74□□□□□ -1.01
SRGAP3-213ENST00000618999 PNPLA6Q8IY17 1366 aa8.74□□□□□ -1.01
SRGAP3-213ENST00000618999 LMTK3Q96Q04 1460 aa8.74□□□□□ -1.01
SRGAP3-213ENST00000618999 MKRN3Q13064 507 aaKnown RBP8.74□□□□□ -1.01
SRGAP3-213ENST00000618999 BCL2L13Q9BXK5 485 aa8.74□□□□□ -1.01
SRGAP3-213ENST00000618999 MYH16Q9H6N6 1097 aa8.74□□□□□ -1.01
SRGAP3-213ENST00000618999 IGHDP01880 384 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 KCNH5Q8NCM2 988 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 PHACTR3Q96KR7 559 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 ITSN1Q15811 1721 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 UBE2Q2Q8WVN8 375 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 OVOS2A0A0J9YW53 1432 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 OVOS2Q6IE36 1432 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 ZC3H6P61129 1189 aaKnown RBP8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 WDR63Q8IWG1 891 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 PLEKHF1Q96S99 279 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 CHMP5Q9NZZ3 219 aa8.73□□□□□ -1.01
SRGAP3-213ENST00000618999 ZNF521Q96K83 1311 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 SSH2Q76I76 1423 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 GCP02774 474 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 C1orf167Q5SNV9 1468 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 NPHP3Q7Z494 1330 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 FLT4P35916 1363 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 DDX11L8A8MPP1 907 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 NFE2L2Q16236 605 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 SLAIN2Q9P270 581 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 PDZRN3Q9UPQ7 1066 aa8.72□□□□□ -1.01
SRGAP3-213ENST00000618999 KIF20BQ96Q89 1820 aa8.71□□□□□ -1.01
SRGAP3-213ENST00000618999 USP31Q70CQ4 1352 aa8.71□□□□□ -1.01
SRGAP3-213ENST00000618999 RGPD8O14715 1765 aaPredicted RBP8.71□□□□□ -1.01
SRGAP3-213ENST00000618999 GOLGA6L22H0YM25 854 aa8.71□□□□□ -1.01
SRGAP3-213ENST00000618999 HOXC9P31274 260 aa8.71□□□□□ -1.02
SRGAP3-213ENST00000618999 THUMPD2Q9BTF0 503 aaKnown RBP8.71□□□□□ -1.02
SRGAP3-213ENST00000618999 MTMR7Q9Y216 660 aa8.71□□□□□ -1.02
SRGAP3-213ENST00000618999 SBNO1A3KN83 1393 aa8.71□□□□□ -1.02
SRGAP3-213ENST00000618999 CCDC27Q2M243 656 aa8.71□□□□□ -1.02
SRGAP3-213ENST00000618999 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
SRGAP3-213ENST00000618999 TSR2Q969E8 191 aaKnown RBP8.71□□□□□ -1.02
SRGAP3-213ENST00000618999 NALCNQ8IZF0 1738 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 EYA1Q99502 592 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 C22orf23Q9BZE7 217 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 CDK12Q9NYV4 1490 aaPredicted RBP8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 ZKSCAN2Q63HK3 967 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 ITPRIPQ8IWB1 547 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 GBP4Q96PP9 640 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 MON2Q7Z3U7 1717 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 FMN2Q9NZ56 1722 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 LMOD3Q0VAK6 560 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 SMC4Q9NTJ3 1288 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 TRIM35Q9UPQ4 493 aa8.7□□□□□ -1.02
SRGAP3-213ENST00000618999 MAP2P11137 1827 aaKnown RBP8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 COL3A1P02461 1466 aaPredicted RBP8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 MCM4P33991 863 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 RTF1Q92541 710 aaKnown RBP8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 TBC1D2Q9BYX2 928 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 TRAK2O60296 914 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 MRE11P49959 708 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 DCTN1Q14203 1278 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 AKAP12Q02952 1782 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 SEC24BO95487 1268 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 IP6K1Q92551 441 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 TBC1D32Q96NH3 1257 aa8.69□□□□□ -1.02
SRGAP3-213ENST00000618999 BRINP3Q76B58 766 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 DZIP1LQ8IYY4 767 aaKnown RBP8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 TOPAZ1Q8N9V7 1692 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 FAM83GA6ND36 823 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 PTMSP20962 102 aa8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 EXOSC9Q06265 439 aaKnown RBP8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 HSP90AA2PQ14568 343 aaPredicted RBP8.68□□□□□ -1.02
SRGAP3-213ENST00000618999 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms