RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
DDB2-213ENST00000617847 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
DDB2-213ENST00000617847 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
DDB2-213ENST00000617847 COL3A1P02461 1466 aaPredicted RBP16.86■□□□□ 0.29
DDB2-213ENST00000617847 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
DDB2-213ENST00000617847 DDX54Q8TDD1 881 aaKnown RBP16.85■□□□□ 0.29
DDB2-213ENST00000617847 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
DDB2-213ENST00000617847 NHSQ6T4R5 1651 aa16.84■□□□□ 0.29
DDB2-213ENST00000617847 KAT6BQ8WYB5 2073 aa16.84■□□□□ 0.29
DDB2-213ENST00000617847 APBA3O96018 575 aa16.84■□□□□ 0.29
DDB2-213ENST00000617847 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
DDB2-213ENST00000617847 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
DDB2-213ENST00000617847 PTF1AQ7RTS3 328 aa16.84■□□□□ 0.29
DDB2-213ENST00000617847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDB2-213ENST00000617847 KDRP35968 1356 aa16.84■□□□□ 0.29
DDB2-213ENST00000617847 CAMKK2Q96RR4 588 aa16.83■□□□□ 0.28
DDB2-213ENST00000617847 PCDH11XQ9BZA7 1347 aa16.83■□□□□ 0.28
DDB2-213ENST00000617847 PCDH11YQ9BZA8 1340 aa16.83■□□□□ 0.28
DDB2-213ENST00000617847 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
DDB2-213ENST00000617847 CYP27B1O15528 508 aa16.81■□□□□ 0.28
DDB2-213ENST00000617847 KCNQ2O43526 872 aa16.81■□□□□ 0.28
DDB2-213ENST00000617847 RGPD3A6NKT7 1758 aaPredicted RBP16.81■□□□□ 0.28
DDB2-213ENST00000617847 PLSCR1O15162 318 aa16.81■□□□□ 0.28
DDB2-213ENST00000617847 RGPD4Q7Z3J3 1758 aa16.81■□□□□ 0.28
DDB2-213ENST00000617847 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
DDB2-213ENST00000617847 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
DDB2-213ENST00000617847 SPG7Q9UQ90 795 aa16.81■□□□□ 0.28
DDB2-213ENST00000617847 EZH2Q15910 746 aaKnown RBP16.8■□□□□ 0.28
DDB2-213ENST00000617847 SULT6B1Q6IMI4 303 aa16.8■□□□□ 0.28
DDB2-213ENST00000617847 DOT1LQ8TEK3 1739 aa16.79■□□□□ 0.28
DDB2-213ENST00000617847 RREB1Q92766 1687 aa16.79■□□□□ 0.28
DDB2-213ENST00000617847 NKX1-1Q15270 411 aaPredicted RBP16.78■□□□□ 0.28
DDB2-213ENST00000617847 BTAF1O14981 1849 aa16.78■□□□□ 0.28
DDB2-213ENST00000617847 ZNF316A6NFI3 1004 aaPredicted RBP16.78■□□□□ 0.28
DDB2-213ENST00000617847 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
DDB2-213ENST00000617847 RALBP1Q15311 655 aa16.77■□□□□ 0.27
DDB2-213ENST00000617847 PHKG2P15735 406 aa16.76■□□□□ 0.27
DDB2-213ENST00000617847 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
DDB2-213ENST00000617847 PLEKHO1Q53GL0 409 aaPredicted RBP16.76■□□□□ 0.27
DDB2-213ENST00000617847 IFNL2Q8IZJ0 200 aa16.76■□□□□ 0.27
DDB2-213ENST00000617847 TOGARAM1Q9Y4F4 1720 aa16.75■□□□□ 0.27
DDB2-213ENST00000617847 PRIM1P49642 420 aaKnown RBP16.75■□□□□ 0.27
DDB2-213ENST00000617847 NUP188Q5SRE5 1749 aa16.75■□□□□ 0.27
DDB2-213ENST00000617847 HMOX1P09601 288 aa16.74■□□□□ 0.27
DDB2-213ENST00000617847 PROM2Q8N271 834 aa16.74■□□□□ 0.27
DDB2-213ENST00000617847 ITGB4P16144 1822 aa16.72■□□□□ 0.27
DDB2-213ENST00000617847 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
DDB2-213ENST00000617847 ZNF530Q6P9A1 599 aaPredicted RBP16.72■□□□□ 0.27
DDB2-213ENST00000617847 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
DDB2-213ENST00000617847 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
DDB2-213ENST00000617847 TXNRD1Q16881 649 aa16.71■□□□□ 0.27
DDB2-213ENST00000617847 HSP90AB1P08238 724 aaKnown RBP16.7■□□□□ 0.26
DDB2-213ENST00000617847 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
DDB2-213ENST00000617847 DCAF5Q96JK2 942 aa16.69■□□□□ 0.26
DDB2-213ENST00000617847 RSPH6AQ9H0K4 717 aa16.69■□□□□ 0.26
DDB2-213ENST00000617847 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
DDB2-213ENST00000617847 KDM6AO15550 1401 aaPredicted RBP16.69■□□□□ 0.26
DDB2-213ENST00000617847 LY75O60449 1722 aa16.68■□□□□ 0.26
DDB2-213ENST00000617847 C1orf141Q5JVX7 400 aa16.68■□□□□ 0.26
DDB2-213ENST00000617847 ERVV-2B6SEH9 535 aa16.67■□□□□ 0.26
DDB2-213ENST00000617847 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
DDB2-213ENST00000617847 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
DDB2-213ENST00000617847 MPRIPQ6WCQ1 1025 aa16.67■□□□□ 0.26
DDB2-213ENST00000617847 FCHSD2O94868 740 aa16.67■□□□□ 0.26
DDB2-213ENST00000617847 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
DDB2-213ENST00000617847 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.263e-10■■■■□ 20.8
DDB2-213ENST00000617847 PIGBQ92521 554 aa16.67■□□□□ 0.26
DDB2-213ENST00000617847 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
DDB2-213ENST00000617847 PAPPAQ13219 1627 aa16.66■□□□□ 0.26
DDB2-213ENST00000617847 NBPF14Q5TI25 921 aa16.66■□□□□ 0.26
DDB2-213ENST00000617847 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
DDB2-213ENST00000617847 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
DDB2-213ENST00000617847 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
DDB2-213ENST00000617847 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
DDB2-213ENST00000617847 TMOD3Q9NYL9 352 aa16.65■□□□□ 0.26
DDB2-213ENST00000617847 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
DDB2-213ENST00000617847 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
DDB2-213ENST00000617847 R3HDM1Q15032 1099 aaKnown RBP16.63■□□□□ 0.25
DDB2-213ENST00000617847 GAS2L2Q8NHY3 880 aa16.63■□□□□ 0.25
DDB2-213ENST00000617847 SMARCC1Q92922 1105 aaPredicted RBP16.63■□□□□ 0.25
DDB2-213ENST00000617847 PHACTR3Q96KR7 559 aa16.63■□□□□ 0.25
DDB2-213ENST00000617847 PALLDQ8WX93 1383 aa16.63■□□□□ 0.25
DDB2-213ENST00000617847 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
DDB2-213ENST00000617847 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
DDB2-213ENST00000617847 MRC1P22897 1456 aa16.62■□□□□ 0.25
DDB2-213ENST00000617847 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
DDB2-213ENST00000617847 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
DDB2-213ENST00000617847 MAP3K5Q99683 1374 aa16.6■□□□□ 0.25
DDB2-213ENST00000617847 CABP4P57796 275 aa16.6■□□□□ 0.25
DDB2-213ENST00000617847 ATG3Q9NT62 314 aa16.6■□□□□ 0.25
DDB2-213ENST00000617847 CCNL1Q9UK58 526 aaPredicted RBP16.6■□□□□ 0.25
DDB2-213ENST00000617847 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
DDB2-213ENST00000617847 PLEKHF1Q96S99 279 aa16.59■□□□□ 0.25
DDB2-213ENST00000617847 STK32BQ9NY57 414 aa16.59■□□□□ 0.25
DDB2-213ENST00000617847 KCNQ4P56696 695 aa16.59■□□□□ 0.25
DDB2-213ENST00000617847 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
DDB2-213ENST00000617847 TAF1LQ8IZX4 1826 aa16.58■□□□□ 0.25
DDB2-213ENST00000617847 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
DDB2-213ENST00000617847 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.24
DDB2-213ENST00000617847 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms