RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 WDR63Q8IWG1 891 aa6.92□□□□□ -1.3
CPNE4-214ENST00000617767 DDX17Q92841 729 aaKnown RBP6.92□□□□□ -1.3
CPNE4-214ENST00000617767 ZNF428Q96B54 188 aa6.92□□□□□ -1.3
CPNE4-214ENST00000617767 PUS7Q96PZ0 661 aaKnown RBP6.92□□□□□ -1.3
CPNE4-214ENST00000617767 PCDHB15Q9Y5E8 787 aa6.92□□□□□ -1.3
CPNE4-214ENST00000617767 IL13P35225 146 aa6.91□□□□□ -1.3
CPNE4-214ENST00000617767 PSEN1P49768 467 aa6.91□□□□□ -1.3
CPNE4-214ENST00000617767 MMP14P50281 582 aa6.91□□□□□ -1.3
CPNE4-214ENST00000617767 GZF1Q9H116 711 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-214ENST00000617767 NINLQ9Y2I6 1382 aa6.91□□□□□ -1.3
CPNE4-214ENST00000617767 HSPA2P54652 639 aa6.91□□□□□ -1.3
CPNE4-214ENST00000617767 TRIM44Q96DX7 344 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-214ENST00000617767 GTPBP4Q9BZE4 634 aaKnown RBP6.91□□□□□ -1.3
CPNE4-214ENST00000617767 ATP7BP35670 1465 aa6.91□□□□□ -1.3
CPNE4-214ENST00000617767 FCHSD2O94868 740 aa6.9□□□□□ -1.3
CPNE4-214ENST00000617767 TRIM27P14373 513 aa6.9□□□□□ -1.3
CPNE4-214ENST00000617767 IRX5P78411 483 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-214ENST00000617767 RIMS1Q86UR5 1692 aaKnown RBP6.9□□□□□ -1.3
CPNE4-214ENST00000617767 LRRC7Q96NW7 1537 aa6.9□□□□□ -1.3
CPNE4-214ENST00000617767 EDC4Q6P2E9 1401 aaKnown RBP6.9□□□□□ -1.3
CPNE4-214ENST00000617767 ANKLE2Q86XL3 938 aa6.9□□□□□ -1.3
CPNE4-214ENST00000617767 R3HCC1Q9Y3T6 440 aaKnown RBP6.9□□□□□ -1.3
CPNE4-214ENST00000617767 CCDC9Q9Y3X0 531 aaKnown RBP6.9□□□□□ -1.3
CPNE4-214ENST00000617767 PLEKHG1Q9ULL1 1385 aa6.9□□□□□ -1.31
CPNE4-214ENST00000617767 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.9□□□□□ -1.31
CPNE4-214ENST00000617767 APBB1O00213 710 aa6.9□□□□□ -1.31
CPNE4-214ENST00000617767 PRR29P0C7W0 189 aa6.9□□□□□ -1.31
CPNE4-214ENST00000617767 ZKSCAN2Q63HK3 967 aa6.9□□□□□ -1.31
CPNE4-214ENST00000617767 MBIPQ9NS73 344 aa6.9□□□□□ -1.31
CPNE4-214ENST00000617767 IQSEC2Q5JU85 1478 aa6.9□□□□□ -1.31
CPNE4-214ENST00000617767 MAP3K19Q56UN5 1328 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 NFE2L2Q16236 605 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 CENPQQ7L2Z9 268 aaPredicted RBP6.89□□□□□ -1.31
CPNE4-214ENST00000617767 DZIP1LQ8IYY4 767 aaKnown RBP6.89□□□□□ -1.31
CPNE4-214ENST00000617767 TMEM57Q8N5G2 664 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 C8orf58Q8NAV2 365 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 ORAI2Q96SN7 254 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 ZNF692Q9BU19 519 aaPredicted RBP6.89□□□□□ -1.31
CPNE4-214ENST00000617767 CCDC94Q9BW85 323 aaPredicted RBP6.89□□□□□ -1.31
CPNE4-214ENST00000617767 CBX1P83916 185 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 PSME1Q06323 249 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 FBXO3Q9UK99 471 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 COL3A1P02461 1466 aaPredicted RBP6.89□□□□□ -1.31
CPNE4-214ENST00000617767 CPSF1Q10570 1443 aaKnown RBP6.89□□□□□ -1.31
CPNE4-214ENST00000617767 IGSF3O75054 1194 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 TAF3Q5VWG9 929 aa6.89□□□□□ -1.31
CPNE4-214ENST00000617767 MTERF4Q7Z6M4 381 aaKnown RBP6.89□□□□□ -1.31
CPNE4-214ENST00000617767 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.89□□□□□ -1.31
CPNE4-214ENST00000617767 KDM2BQ8NHM5 1336 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 USP32Q8NFA0 1604 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 TBX22Q9Y458 520 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 UQCRHLA0A096LP55 91 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 FSD2A1L4K1 749 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 OFD1O75665 1012 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 PTMAP06454 111 aaKnown RBP6.88□□□□□ -1.31
CPNE4-214ENST00000617767 UQCRHP07919 91 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 KCNJ4P48050 445 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 TPRNQ4KMQ1 711 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 EP400NLQ6ZTU2 488 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 ITSN1Q15811 1721 aa6.88□□□□□ -1.31
CPNE4-214ENST00000617767 TWISTNBQ3B726 338 aaPredicted RBP6.87□□□□□ -1.31
CPNE4-214ENST00000617767 GRIPAP1Q4V328 841 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 TICAM2Q86XR7 235 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 ZNF622Q969S3 477 aaKnown RBP eCLIP6.87□□□□□ -1.31
CPNE4-214ENST00000617767 DLC1Q96QB1 1528 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 PDE3AQ14432 1141 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 CCDC27Q2M243 656 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 ATF7IPQ6VMQ6 1270 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 GOLGB1Q14789 3259 aaKnown RBP6.87□□□□□ -1.31
CPNE4-214ENST00000617767 USP6P35125 1406 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 FAM135BQ49AJ0 1406 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 ANKRD26Q9UPS8 1709 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 CDC42BPGQ6DT37 1551 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 MS4A1P11836 297 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 MVPQ14764 893 aaKnown RBP6.87□□□□□ -1.31
CPNE4-214ENST00000617767 SLC4A10Q6U841 1118 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.87□□□□□ -1.31
CPNE4-214ENST00000617767 PROSER2Q86WR7 435 aaPredicted RBP6.87□□□□□ -1.31
CPNE4-214ENST00000617767 LRRC59Q96AG4 307 aaKnown RBP6.87□□□□□ -1.31
CPNE4-214ENST00000617767 EYA1Q99502 592 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 PHF8Q9UPP1 1060 aa6.87□□□□□ -1.31
CPNE4-214ENST00000617767 PNPLA6Q8IY17 1366 aa6.86□□□□□ -1.31
CPNE4-214ENST00000617767 DLG5Q8TDM6 1919 aa6.86□□□□□ -1.31
CPNE4-214ENST00000617767 SEC24BO95487 1268 aa6.86□□□□□ -1.31
CPNE4-214ENST00000617767 MTHFSDQ2M296 383 aaKnown RBP6.86□□□□□ -1.31
CPNE4-214ENST00000617767 ZNF592Q92610 1267 aa6.86□□□□□ -1.31
CPNE4-214ENST00000617767 PDZRN3Q9UPQ7 1066 aa6.86□□□□□ -1.31
CPNE4-214ENST00000617767 PLEKHG3A1L390 1219 aa6.86□□□□□ -1.31
CPNE4-214ENST00000617767 ZC3H6P61129 1189 aaKnown RBP6.86□□□□□ -1.31
CPNE4-214ENST00000617767 DNAJC2Q99543 621 aaKnown RBP6.86□□□□□ -1.31
CPNE4-214ENST00000617767 CABLES1Q8TDN4 633 aa6.85□□□□□ -1.31
CPNE4-214ENST00000617767 RTF1Q92541 710 aaKnown RBP6.85□□□□□ -1.31
CPNE4-214ENST00000617767 KAT6BQ8WYB5 2073 aa6.85□□□□□ -1.31
CPNE4-214ENST00000617767 MRE11P49959 708 aa6.85□□□□□ -1.31
CPNE4-214ENST00000617767 SPRYD3Q8NCJ5 442 aa6.85□□□□□ -1.31
CPNE4-214ENST00000617767 LNPKQ9C0E8 428 aa6.85□□□□□ -1.31
CPNE4-214ENST00000617767 VAMP4O75379 141 aa6.85□□□□□ -1.31
CPNE4-214ENST00000617767 TERF1P54274 439 aa6.85□□□□□ -1.31
CPNE4-214ENST00000617767 GNAI1P63096 354 aa6.85□□□□□ -1.31
CPNE4-214ENST00000617767 F6X3S4 739 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms