RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 KNDC1Q76NI1 1749 aa17.37■□□□□ 0.37
CACNA1C-231ENST00000616390 MAP3K19Q56UN5 1328 aa17.36■□□□□ 0.37
CACNA1C-231ENST00000616390 PLEKHG3A1L390 1219 aa17.36■□□□□ 0.37
CACNA1C-231ENST00000616390 GCC1Q96CN9 775 aa17.36■□□□□ 0.37
CACNA1C-231ENST00000616390 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
CACNA1C-231ENST00000616390 USP6P35125 1406 aa17.36■□□□□ 0.37
CACNA1C-231ENST00000616390 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
CACNA1C-231ENST00000616390 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
CACNA1C-231ENST00000616390 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
CACNA1C-231ENST00000616390 RTF1Q92541 710 aaKnown RBP17.35■□□□□ 0.37
CACNA1C-231ENST00000616390 NECTIN2Q92692 538 aa17.35■□□□□ 0.37
CACNA1C-231ENST00000616390 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
CACNA1C-231ENST00000616390 PLEKHG1Q9ULL1 1385 aa17.35■□□□□ 0.37
CACNA1C-231ENST00000616390 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
CACNA1C-231ENST00000616390 NLRP6P59044 892 aa17.34■□□□□ 0.37
CACNA1C-231ENST00000616390 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
CACNA1C-231ENST00000616390 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
CACNA1C-231ENST00000616390 RGPD8O14715 1765 aaPredicted RBP17.34■□□□□ 0.37
CACNA1C-231ENST00000616390 C16orf71Q8IYS4 520 aaPredicted RBP17.34■□□□□ 0.37
CACNA1C-231ENST00000616390 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.36
CACNA1C-231ENST00000616390 CHL1O00533 1208 aa17.33■□□□□ 0.36
CACNA1C-231ENST00000616390 HSCBQ8IWL3 235 aa17.33■□□□□ 0.36
CACNA1C-231ENST00000616390 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.36
CACNA1C-231ENST00000616390 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
CACNA1C-231ENST00000616390 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
CACNA1C-231ENST00000616390 F6X3S4 739 aa17.32■□□□□ 0.36
CACNA1C-231ENST00000616390 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
CACNA1C-231ENST00000616390 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
CACNA1C-231ENST00000616390 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
CACNA1C-231ENST00000616390 PEAK1Q9H792 1746 aa17.31■□□□□ 0.36
CACNA1C-231ENST00000616390 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
CACNA1C-231ENST00000616390 EYA1Q99502 592 aa17.31■□□□□ 0.36
CACNA1C-231ENST00000616390 BMP2KLQ5H9B9 411 aa17.3■□□□□ 0.36
CACNA1C-231ENST00000616390 TBC1D9Q6ZT07 1266 aa17.3■□□□□ 0.36
CACNA1C-231ENST00000616390 G2E3Q7L622 706 aa17.3■□□□□ 0.36
CACNA1C-231ENST00000616390 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
CACNA1C-231ENST00000616390 MEIS3Q99687 375 aa17.29■□□□□ 0.36
CACNA1C-231ENST00000616390 KCNA6P17658 529 aa17.29■□□□□ 0.36
CACNA1C-231ENST00000616390 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
CACNA1C-231ENST00000616390 GZF1Q9H116 711 aaPredicted RBP17.29■□□□□ 0.36
CACNA1C-231ENST00000616390 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
CACNA1C-231ENST00000616390 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
CACNA1C-231ENST00000616390 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
CACNA1C-231ENST00000616390 ABTB2Q8N961 1025 aa17.28■□□□□ 0.36
CACNA1C-231ENST00000616390 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
CACNA1C-231ENST00000616390 MSH6P52701 1360 aa17.28■□□□□ 0.36
CACNA1C-231ENST00000616390 INTS3Q68E01 1043 aaKnown RBP17.27■□□□□ 0.35
CACNA1C-231ENST00000616390 TBX22Q9Y458 520 aa17.27■□□□□ 0.35
CACNA1C-231ENST00000616390 HSP90AA1P07900 732 aaKnown RBP17.26■□□□□ 0.35
CACNA1C-231ENST00000616390 NRKQ7Z2Y5 1582 aa17.26■□□□□ 0.35
CACNA1C-231ENST00000616390 HSP90AB1P08238 724 aaKnown RBP17.26■□□□□ 0.35
CACNA1C-231ENST00000616390 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
CACNA1C-231ENST00000616390 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
CACNA1C-231ENST00000616390 DCTPP1Q9H773 170 aa17.25■□□□□ 0.35
CACNA1C-231ENST00000616390 FLT4P35916 1363 aa17.25■□□□□ 0.35
CACNA1C-231ENST00000616390 TTC21AQ8NDW8 1320 aa17.25■□□□□ 0.35
CACNA1C-231ENST00000616390 CEP85Q6P2H3 762 aa17.25■□□□□ 0.35
CACNA1C-231ENST00000616390 TOPAZ1Q8N9V7 1692 aa17.24■□□□□ 0.35
CACNA1C-231ENST00000616390 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
CACNA1C-231ENST00000616390 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
CACNA1C-231ENST00000616390 CD2BP2O95400 341 aaKnown RBP17.24■□□□□ 0.35
CACNA1C-231ENST00000616390 CHMP5Q9NZZ3 219 aa17.24■□□□□ 0.35
CACNA1C-231ENST00000616390 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
CACNA1C-231ENST00000616390 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
CACNA1C-231ENST00000616390 CRB1P82279 1406 aa17.23■□□□□ 0.35
CACNA1C-231ENST00000616390 CDC45O75419 566 aa17.22■□□□□ 0.35
CACNA1C-231ENST00000616390 CEP170BQ9Y4F5 1589 aaPredicted RBP17.22■□□□□ 0.35
CACNA1C-231ENST00000616390 RGS12O14924 1447 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 SSH2Q76I76 1423 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 FKBP5Q13451 457 aaPredicted RBP17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 DIP2AQ14689 1571 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 HOXC9P31274 260 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 MCM4P33991 863 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 GAS2L2Q8NHY3 880 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 KIF2CQ99661 725 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
CACNA1C-231ENST00000616390 PTPRCP08575 1304 aa17.2■□□□□ 0.34
CACNA1C-231ENST00000616390 RTL1A6NKG5 1358 aa17.2■□□□□ 0.34
CACNA1C-231ENST00000616390 KIAA0232Q92628 1395 aa17.2■□□□□ 0.34
CACNA1C-231ENST00000616390 RPAP2Q8IXW5 612 aaPredicted RBP17.2■□□□□ 0.34
CACNA1C-231ENST00000616390 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
CACNA1C-231ENST00000616390 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
CACNA1C-231ENST00000616390 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
CACNA1C-231ENST00000616390 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
CACNA1C-231ENST00000616390 NALCNQ8IZF0 1738 aa17.19■□□□□ 0.34
CACNA1C-231ENST00000616390 IGSF1Q8N6C5 1336 aa17.19■□□□□ 0.34
CACNA1C-231ENST00000616390 NAP1L5Q96NT1 182 aaPredicted RBP17.19■□□□□ 0.34
CACNA1C-231ENST00000616390 FMN2Q9NZ56 1722 aa17.19■□□□□ 0.34
CACNA1C-231ENST00000616390 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
CACNA1C-231ENST00000616390 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
CACNA1C-231ENST00000616390 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
CACNA1C-231ENST00000616390 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
CACNA1C-231ENST00000616390 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
CACNA1C-231ENST00000616390 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
CACNA1C-231ENST00000616390 SDSP20132 328 aa17.17■□□□□ 0.34
CACNA1C-231ENST00000616390 EIF2S2P20042 333 aaKnown RBP17.16■□□□□ 0.34
CACNA1C-231ENST00000616390 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
CACNA1C-231ENST00000616390 FLIIQ13045 1269 aa17.16■□□□□ 0.34
CACNA1C-231ENST00000616390 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms