RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	FMNL2	Q96PY5	1086 aa		18.67	■□□□□ 0.58
SYNRG-223	ENST00000616179	PTPN14	Q15678	1187 aa		18.66	■□□□□ 0.58
SYNRG-223	ENST00000616179	CALCOCO1	Q9P1Z2	691 aa		18.66	■□□□□ 0.58
SYNRG-223	ENST00000616179	TFIP11	Q9UBB9	837 aa	Known RBP	18.66	■□□□□ 0.58
SYNRG-223	ENST00000616179	MAP3K11	Q16584	847 aa		18.66	■□□□□ 0.58
SYNRG-223	ENST00000616179	FAM83G	A6ND36	823 aa		18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	HSP90B1	P14625	803 aa	Known RBP	18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	CLIP2	Q9UDT6	1046 aa		18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	DNM1	Q05193	864 aa	Known RBP	18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	FKBP5	Q13451	457 aa	Predicted RBP	18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	SLC4A2	P04920	1241 aa		18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	UBE2H	P62256	183 aa		18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	STK31	Q9BXU1	1019 aa		18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	SRCIN1	Q9C0H9	1055 aa		18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179	SAMD9	Q5K651	1589 aa		18.65	■□□□□ 0.58
SYNRG-223	ENST00000616179		F6X3S4	739 aa		18.64	■□□□□ 0.58
SYNRG-223	ENST00000616179	CEP135	Q66GS9	1140 aa		18.64	■□□□□ 0.58
SYNRG-223	ENST00000616179	FAM177A1	Q8N128	213 aa	Predicted RBP	18.64	■□□□□ 0.58
SYNRG-223	ENST00000616179	STX6	O43752	255 aa		18.64	■□□□□ 0.57
SYNRG-223	ENST00000616179	HAP1	P54257	671 aa	Predicted RBP	18.64	■□□□□ 0.57
SYNRG-223	ENST00000616179	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.64	■□□□□ 0.57
SYNRG-223	ENST00000616179	MNS1	Q8NEH6	495 aa		18.64	■□□□□ 0.57
SYNRG-223	ENST00000616179	GTF3C6	Q969F1	213 aa		18.64	■□□□□ 0.57
SYNRG-223	ENST00000616179	STK3	Q13188	491 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	MRPL50	Q8N5N7	158 aa	Known RBP	18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179		H3BQV1	296 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	BRD1	O95696	1058 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	IFFO2	Q5TF58	517 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	MEIS3	Q99687	375 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	NOL10	Q9BSC4	688 aa	Known RBP	18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	MIS18A	Q9NYP9	233 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	WDR62	O43379	1518 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	LMOD3	Q0VAK6	560 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	LARP1B	Q659C4	914 aa	Known RBP	18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	C8orf58	Q8NAV2	365 aa		18.63	■□□□□ 0.57
SYNRG-223	ENST00000616179	NUTM1	Q86Y26	1132 aa		18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	SYTL4	Q96C24	671 aa	Predicted RBP	18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	ABCC11	Q96J66	1382 aa		18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	VAMP4	O75379	141 aa		18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	MBIP	Q9NS73	344 aa		18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	SIRT2	Q8IXJ6	389 aa		18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	DCTPP1	Q9H773	170 aa		18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	AK9	Q5TCS8	1911 aa		18.62	■□□□□ 0.57
SYNRG-223	ENST00000616179	KRT24	Q2M2I5	525 aa		18.61	■□□□□ 0.57
SYNRG-223	ENST00000616179	CWC27	Q6UX04	472 aa	Known RBP	18.61	■□□□□ 0.57
SYNRG-223	ENST00000616179	CPA1	P15085	419 aa		18.61	■□□□□ 0.57
SYNRG-223	ENST00000616179	PALD1	Q9ULE6	856 aa		18.61	■□□□□ 0.57
SYNRG-223	ENST00000616179	TMX1	Q9H3N1	280 aa		18.61	■□□□□ 0.57
SYNRG-223	ENST00000616179	ZSCAN22	P10073	491 aa	Predicted RBP	18.6	■□□□□ 0.57
SYNRG-223	ENST00000616179	CAST	P20810	708 aa	Known RBP	18.6	■□□□□ 0.57
SYNRG-223	ENST00000616179	FAM173B	Q6P4H8	233 aa		18.6	■□□□□ 0.57
SYNRG-223	ENST00000616179	KRT85	P78386	507 aa		18.6	■□□□□ 0.57
SYNRG-223	ENST00000616179	LRRCC1	Q9C099	1032 aa		18.6	■□□□□ 0.57
SYNRG-223	ENST00000616179	ANO6	Q4KMQ2	910 aa		18.6	■□□□□ 0.57
SYNRG-223	ENST00000616179	PPIP5K1	Q6PFW1	1433 aa		18.6	■□□□□ 0.57
SYNRG-223	ENST00000616179	URB2	Q14146	1524 aa	Known RBP	18.6	■□□□□ 0.57
SYNRG-223	ENST00000616179	GPS2	Q13227	327 aa		18.59	■□□□□ 0.57
SYNRG-223	ENST00000616179	DNAJC2	Q99543	621 aa	Known RBP	18.59	■□□□□ 0.57
SYNRG-223	ENST00000616179	DNAJC5B	Q9UF47	199 aa		18.59	■□□□□ 0.57
SYNRG-223	ENST00000616179	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.59	■□□□□ 0.57
SYNRG-223	ENST00000616179	PDE1A	P54750	535 aa		18.59	■□□□□ 0.57
SYNRG-223	ENST00000616179	KIAA1524	Q8TCG1	905 aa		18.59	■□□□□ 0.57
SYNRG-223	ENST00000616179	ARGLU1	Q9NWB6	273 aa	Predicted RBP	18.59	■□□□□ 0.57
SYNRG-223	ENST00000616179	CCDC141	Q6ZP82	1450 aa		18.58	■□□□□ 0.57
SYNRG-223	ENST00000616179	NCOA3	Q9Y6Q9	1424 aa		18.58	■□□□□ 0.57
SYNRG-223	ENST00000616179	SMTNL1	A8MU46	457 aa		18.58	■□□□□ 0.57
SYNRG-223	ENST00000616179	SURF6	O75683	361 aa	Known RBP	18.58	■□□□□ 0.57
SYNRG-223	ENST00000616179	NRBP1	Q9UHY1	535 aa		18.58	■□□□□ 0.57
SYNRG-223	ENST00000616179	SPG7	Q9UQ90	795 aa		18.58	■□□□□ 0.57
SYNRG-223	ENST00000616179	ZNF165	P49910	485 aa		18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	NFE2L2	Q16236	605 aa		18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	CLEC17A	Q6ZS10	378 aa		18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	ZNF428	Q96B54	188 aa		18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	JAKMIP1	Q96N16	626 aa	Known RBP	18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	ABCC2	Q92887	1545 aa		18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	ELF2	Q15723	593 aa		18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	NECAB1	Q8N987	351 aa		18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	ESYT1	Q9BSJ8	1104 aa		18.58	■□□□□ 0.56
SYNRG-223	ENST00000616179	NPC1L1	Q9UHC9	1359 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	NUTM2F	A1L443	756 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	SMC2	O95347	1197 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	GJB2	P29033	226 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	PHACTR3	Q96KR7	559 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	SPATA32	Q96LK8	384 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	LRRIQ1	Q96JM4	1722 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	FCHSD2	O94868	740 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	KIF18A	Q8NI77	898 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	ARHGAP5	Q13017	1502 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	ZKSCAN1	P17029	563 aa	Predicted RBP	18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	GABPB1	Q06547	395 aa	Predicted RBP	18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	PAXBP1	Q9Y5B6	917 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	PTPRG	P23470	1445 aa		18.57	■□□□□ 0.56
SYNRG-223	ENST00000616179	SYT1	P21579	422 aa		18.56	■□□□□ 0.56
SYNRG-223	ENST00000616179	FAM200A	Q8TCP9	573 aa		18.56	■□□□□ 0.56
SYNRG-223	ENST00000616179	DNAJC25	Q9H1X3	360 aa		18.56	■□□□□ 0.56
SYNRG-223	ENST00000616179	MAGI1	Q96QZ7	1491 aa	Predicted RBP	18.56	■□□□□ 0.56
SYNRG-223	ENST00000616179	CYP2E1	P05181	493 aa	Predicted RBP	18.55	■□□□□ 0.56
SYNRG-223	ENST00000616179	ANKRD44	Q8N8A2	993 aa		18.55	■□□□□ 0.56
SYNRG-223	ENST00000616179	DACT1	Q9NYF0	836 aa		18.55	■□□□□ 0.56

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