RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 GCC1Q96CN9 775 aa22.05■■□□□ 1.12
GABPB1-212ENST00000615671 JMYQ8N9B5 988 aa22.05■■□□□ 1.12
GABPB1-212ENST00000615671 STARD3NLO95772 234 aa22.05■■□□□ 1.12
GABPB1-212ENST00000615671 MYD88Q99836 296 aa22.05■■□□□ 1.12
GABPB1-212ENST00000615671 MCM10Q7L590 875 aa22.05■■□□□ 1.12
GABPB1-212ENST00000615671 ERLIN2O94905 339 aa22.05■■□□□ 1.12
GABPB1-212ENST00000615671 ZNF692Q9BU19 519 aaPredicted RBP22.05■■□□□ 1.12
GABPB1-212ENST00000615671 CCDC191Q8NCU4 936 aa22.04■■□□□ 1.12
GABPB1-212ENST00000615671 UBA5Q9GZZ9 404 aa22.04■■□□□ 1.12
GABPB1-212ENST00000615671 CCDC82Q8N4S0 544 aa22.03■■□□□ 1.12
GABPB1-212ENST00000615671 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
GABPB1-212ENST00000615671 NCOA2Q15596 1464 aa22.03■■□□□ 1.12
GABPB1-212ENST00000615671 CT47B1P0C2W7 299 aaPredicted RBP22.03■■□□□ 1.12
GABPB1-212ENST00000615671 PIP4K2AP48426 406 aaPredicted RBP22.03■■□□□ 1.12
GABPB1-212ENST00000615671 CALRP27797 417 aaKnown RBP22.02■■□□□ 1.12
GABPB1-212ENST00000615671 RABEP1Q15276 862 aa22.02■■□□□ 1.12
GABPB1-212ENST00000615671 ECM2O94769 699 aaPredicted RBP22.02■■□□□ 1.12
GABPB1-212ENST00000615671 MKNK2Q9HBH9 465 aa22.02■■□□□ 1.12
GABPB1-212ENST00000615671 BMP2KQ9NSY1 1161 aaPredicted RBP22.02■■□□□ 1.12
GABPB1-212ENST00000615671 BLOC1S2Q6QNY1 142 aa22.02■■□□□ 1.12
GABPB1-212ENST00000615671 ERBINQ96RT1 1412 aa22.02■■□□□ 1.11
GABPB1-212ENST00000615671 WAPLQ7Z5K2 1190 aa22.02■■□□□ 1.11
GABPB1-212ENST00000615671 IGF1RP08069 1367 aa22.01■■□□□ 1.11
GABPB1-212ENST00000615671 ANKRD1Q15327 319 aa22.01■■□□□ 1.11
GABPB1-212ENST00000615671 CCDC96Q2M329 555 aa22.01■■□□□ 1.11
GABPB1-212ENST00000615671 CEP57L1Q8IYX8 460 aa22.01■■□□□ 1.11
GABPB1-212ENST00000615671 SMARCA5O60264 1052 aaPredicted RBP22.01■■□□□ 1.11
GABPB1-212ENST00000615671 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
GABPB1-212ENST00000615671 WWC3Q9ULE0 1092 aa22.01■■□□□ 1.11
GABPB1-212ENST00000615671 SEC63Q9UGP8 760 aaKnown RBP22.01■■□□□ 1.11
GABPB1-212ENST00000615671 DACH1Q9UI36 760 aa22.01■■□□□ 1.11
GABPB1-212ENST00000615671 RBM10P98175 930 aaKnown RBP22■■□□□ 1.11
GABPB1-212ENST00000615671 DZIP1Q86YF9 867 aaKnown RBP22■■□□□ 1.11
GABPB1-212ENST00000615671 SPATA32Q96LK8 384 aa22■■□□□ 1.11
GABPB1-212ENST00000615671 CAVIN4Q5BKX8 364 aa22■■□□□ 1.11
GABPB1-212ENST00000615671 BRD4O60885 1362 aaPredicted RBP22■■□□□ 1.11
GABPB1-212ENST00000615671 TMEM87AQ8NBN3 555 aa21.99■■□□□ 1.11
GABPB1-212ENST00000615671 RPGRQ92834 1020 aaKnown RBP21.99■■□□□ 1.11
GABPB1-212ENST00000615671 GOLGA6L10A6NI86 522 aa21.99■■□□□ 1.11
GABPB1-212ENST00000615671 CASTP20810 708 aaKnown RBP21.99■■□□□ 1.11
GABPB1-212ENST00000615671 CAMK4Q16566 473 aa21.99■■□□□ 1.11
GABPB1-212ENST00000615671 EXOC6BQ9Y2D4 811 aa21.99■■□□□ 1.11
GABPB1-212ENST00000615671 NGLY1Q96IV0 654 aa21.98■■□□□ 1.11
GABPB1-212ENST00000615671 ZRSR2Q15696 482 aaKnown RBP21.98■■□□□ 1.11
GABPB1-212ENST00000615671 AEBP1Q8IUX7 1158 aa21.98■■□□□ 1.11
GABPB1-212ENST00000615671 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
GABPB1-212ENST00000615671 IMMTQ16891 758 aaKnown RBP21.98■■□□□ 1.11
GABPB1-212ENST00000615671 TAF3Q5VWG9 929 aa21.98■■□□□ 1.11
GABPB1-212ENST00000615671 GPTP24298 496 aa21.98■■□□□ 1.11
GABPB1-212ENST00000615671 LRRFIP2Q9Y608 721 aaKnown RBP21.98■■□□□ 1.11
GABPB1-212ENST00000615671 ZNF652Q9Y2D9 606 aa21.97■■□□□ 1.11
GABPB1-212ENST00000615671 CA8P35219 290 aa21.97■■□□□ 1.11
GABPB1-212ENST00000615671 CDKL5O76039 1030 aa21.97■■□□□ 1.11
GABPB1-212ENST00000615671 MCM2P49736 904 aa21.97■■□□□ 1.11
GABPB1-212ENST00000615671 CHD1LQ86WJ1 897 aa21.97■■□□□ 1.11
GABPB1-212ENST00000615671 CCDC192P0DO97 292 aa21.96■■□□□ 1.11
GABPB1-212ENST00000615671 MRE11P49959 708 aa21.96■■□□□ 1.11
GABPB1-212ENST00000615671 BOLA2Q9H3K6 86 aa21.96■■□□□ 1.11
GABPB1-212ENST00000615671 GUCY1B3Q02153 619 aa21.96■■□□□ 1.11
GABPB1-212ENST00000615671 EIF5P55010 431 aaKnown RBP21.96■■□□□ 1.11
GABPB1-212ENST00000615671 NUDT16Q96DE0 195 aaKnown RBP21.96■■□□□ 1.11
GABPB1-212ENST00000615671 RANBP6O60518 1105 aaKnown RBP21.95■■□□□ 1.11
GABPB1-212ENST00000615671 MBD3O95983 291 aa21.95■■□□□ 1.1
GABPB1-212ENST00000615671 WDR70Q9NW82 654 aa21.95■■□□□ 1.1
GABPB1-212ENST00000615671 CCP110O43303 1012 aa21.95■■□□□ 1.1
GABPB1-212ENST00000615671 KRT85P78386 507 aa21.95■■□□□ 1.1
GABPB1-212ENST00000615671 ANKRD18AQ8IVF6 992 aa21.95■■□□□ 1.1
GABPB1-212ENST00000615671 DESP17661 470 aa21.94■■□□□ 1.1
GABPB1-212ENST00000615671 LUC7LQ9NQ29 371 aaKnown RBP21.94■■□□□ 1.1
GABPB1-212ENST00000615671 TNIP1Q15025 636 aa21.94■■□□□ 1.1
GABPB1-212ENST00000615671 KIAA1328Q86T90 577 aa21.94■■□□□ 1.1
GABPB1-212ENST00000615671 PSMD1Q99460 953 aa21.94■■□□□ 1.1
GABPB1-212ENST00000615671 CTNNA3Q9UI47 895 aa21.94■■□□□ 1.1
GABPB1-212ENST00000615671 ATF7IPQ6VMQ6 1270 aa21.94■■□□□ 1.1
GABPB1-212ENST00000615671 TRMT112Q9UI30 125 aaKnown RBP21.93■■□□□ 1.1
GABPB1-212ENST00000615671 CFTRP13569 1480 aa21.93■■□□□ 1.1
GABPB1-212ENST00000615671 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
GABPB1-212ENST00000615671 DNA2P51530 1060 aa21.93■■□□□ 1.1
GABPB1-212ENST00000615671 TTC16Q8NEE8 873 aa21.93■■□□□ 1.1
GABPB1-212ENST00000615671 STAC3Q96MF2 364 aa21.93■■□□□ 1.1
GABPB1-212ENST00000615671 LRRC9Q6ZRR7 1453 aa21.93■■□□□ 1.1
GABPB1-212ENST00000615671 K7ELQ4 463 aaPredicted RBP21.93■■□□□ 1.1
GABPB1-212ENST00000615671 PLCD3Q8N3E9 789 aa21.93■■□□□ 1.1
GABPB1-212ENST00000615671 ZNF622Q969S3 477 aaKnown RBP eCLIP21.93■■□□□ 1.1
GABPB1-212ENST00000615671 C6orf229H3BNL8 230 aa21.92■■□□□ 1.1
GABPB1-212ENST00000615671 KLHL10Q6JEL2 608 aa21.92■■□□□ 1.1
GABPB1-212ENST00000615671 GBP2P32456 591 aaPredicted RBP21.92■■□□□ 1.1
GABPB1-212ENST00000615671 PPP4R3AQ6IN85 833 aa21.92■■□□□ 1.1
GABPB1-212ENST00000615671 TNNT1P13805 278 aa21.92■■□□□ 1.1
GABPB1-212ENST00000615671 AAMPQ13685 434 aa21.91■■□□□ 1.1
GABPB1-212ENST00000615671 MVPQ14764 893 aaKnown RBP21.91■■□□□ 1.1
GABPB1-212ENST00000615671 DUSP27Q5VZP5 1158 aa21.91■■□□□ 1.1
GABPB1-212ENST00000615671 WDR33Q9C0J8 1336 aaKnown RBP21.91■■□□□ 1.1
GABPB1-212ENST00000615671 CCDC144CPQ8IYA2 1237 aa21.91■■□□□ 1.1
GABPB1-212ENST00000615671 LARP6Q9BRS8 491 aaKnown RBP21.91■■□□□ 1.1
GABPB1-212ENST00000615671 CCDC8Q9H0W5 538 aaPredicted RBP21.91■■□□□ 1.1
GABPB1-212ENST00000615671 TMX1Q9H3N1 280 aa21.91■■□□□ 1.1
GABPB1-212ENST00000615671 FERMT3Q86UX7 667 aa21.91■■□□□ 1.1
GABPB1-212ENST00000615671 CCDC83Q8IWF9 413 aa21.91■■□□□ 1.1
GABPB1-212ENST00000615671 C9orf84Q5VXU9 1444 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms