RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 SBF2Q86WG5 1849 aa34.31■■■■□ 3.08
SURF1-205ENST00000615505 CAMKK2Q96RR4 588 aa34.29■■■■□ 3.08
SURF1-205ENST00000615505 IGSF1Q8N6C5 1336 aa34.29■■■■□ 3.08
SURF1-205ENST00000615505 EZH2Q15910 746 aaKnown RBP34.28■■■■□ 3.08
SURF1-205ENST00000615505 ACSBG1Q96GR2 724 aa34.28■■■■□ 3.08
SURF1-205ENST00000615505 PARD3Q8TEW0 1356 aa34.27■■■■□ 3.08
SURF1-205ENST00000615505 PCDH11XQ9BZA7 1347 aa34.27■■■■□ 3.08
SURF1-205ENST00000615505 PCDH11YQ9BZA8 1340 aa34.27■■■■□ 3.08
SURF1-205ENST00000615505 PTF1AQ7RTS3 328 aa34.26■■■■□ 3.08
SURF1-205ENST00000615505 KCNQ2O43526 872 aa34.25■■■■□ 3.07
SURF1-205ENST00000615505 IL13P35225 146 aa34.25■■■■□ 3.07
SURF1-205ENST00000615505 SPG7Q9UQ90 795 aa34.25■■■■□ 3.07
SURF1-205ENST00000615505 PLSCR1O15162 318 aa34.23■■■■□ 3.07
SURF1-205ENST00000615505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.23■■■■□ 3.07
SURF1-205ENST00000615505 SHANK3Q9BYB0 1731 aa34.21■■■■□ 3.07
SURF1-205ENST00000615505 DDX10Q13206 875 aaKnown RBP34.21■■■■□ 3.07
SURF1-205ENST00000615505 DIAPH1O60610 1272 aaKnown RBP34.2■■■■□ 3.07
SURF1-205ENST00000615505 PLEKHG2Q9H7P9 1386 aa34.2■■■■□ 3.07
SURF1-205ENST00000615505 NHSQ6T4R5 1651 aa34.19■■■■□ 3.06
SURF1-205ENST00000615505 KAT6BQ8WYB5 2073 aa34.18■■■■□ 3.06
SURF1-205ENST00000615505 CYP27B1O15528 508 aa34.17■■■■□ 3.06
SURF1-205ENST00000615505 SULT6B1Q6IMI4 303 aa34.17■■■■□ 3.06
SURF1-205ENST00000615505 SYTL4Q96C24 671 aaPredicted RBP34.16■■■■□ 3.06
SURF1-205ENST00000615505 PKD1L3Q7Z443 1732 aa34.16■■■■□ 3.06
SURF1-205ENST00000615505 PPP2R1AP30153 589 aa34.15■■■■□ 3.06
SURF1-205ENST00000615505 PRIM1P49642 420 aaKnown RBP34.15■■■■□ 3.06
SURF1-205ENST00000615505 CFAP53Q96M91 514 aa34.15■■■■□ 3.06
SURF1-205ENST00000615505 AEBP1Q8IUX7 1158 aa34.14■■■■□ 3.06
SURF1-205ENST00000615505 PLEKHO1Q53GL0 409 aaPredicted RBP34.13■■■■□ 3.05
SURF1-205ENST00000615505 AMOTQ4VCS5 1084 aa34.12■■■■□ 3.05
SURF1-205ENST00000615505 IFNL2Q8IZJ0 200 aa34.12■■■■□ 3.05
SURF1-205ENST00000615505 KDRP35968 1356 aa34.11■■■■□ 3.05
SURF1-205ENST00000615505 RGPD3A6NKT7 1758 aaPredicted RBP34.11■■■■□ 3.05
SURF1-205ENST00000615505 RGPD4Q7Z3J3 1758 aa34.11■■■■□ 3.05
SURF1-205ENST00000615505 NKX1-1Q15270 411 aaPredicted RBP34.09■■■■□ 3.05
SURF1-205ENST00000615505 DOT1LQ8TEK3 1739 aa34.08■■■■□ 3.05
SURF1-205ENST00000615505 PHKG2P15735 406 aa34.08■■■■□ 3.05
SURF1-205ENST00000615505 NBPF14Q5TI25 921 aa34.08■■■■□ 3.05
SURF1-205ENST00000615505 RREB1Q92766 1687 aa34.08■■■■□ 3.05
SURF1-205ENST00000615505 COL3A1P02461 1466 aaPredicted RBP34.07■■■■□ 3.05
SURF1-205ENST00000615505 U2SURPO15042 1029 aaKnown RBP34.06■■■■□ 3.04
SURF1-205ENST00000615505 HMOX1P09601 288 aa34.06■■■■□ 3.04
SURF1-205ENST00000615505 TXNRD1Q16881 649 aa34.06■■■■□ 3.04
SURF1-205ENST00000615505 BTAF1O14981 1849 aa34.06■■■■□ 3.04
SURF1-205ENST00000615505 PROM2Q8N271 834 aa34.05■■■■□ 3.04
SURF1-205ENST00000615505 ZNF530Q6P9A1 599 aaPredicted RBP34.03■■■■□ 3.04
SURF1-205ENST00000615505 NUDCQ9Y266 331 aa34.03■■■■□ 3.04
SURF1-205ENST00000615505 NUP188Q5SRE5 1749 aa34.01■■■■□ 3.04
SURF1-205ENST00000615505 PSDA5PKW4 1024 aaPredicted RBP34.01■■■■□ 3.03
SURF1-205ENST00000615505 HSP90AB1P08238 724 aaKnown RBP34.01■■■■□ 3.03
SURF1-205ENST00000615505 RALBP1Q15311 655 aa34.01■■■■□ 3.03
SURF1-205ENST00000615505 R3HDM1Q15032 1099 aaKnown RBP34■■■■□ 3.03
SURF1-205ENST00000615505 MPRIPQ6WCQ1 1025 aa34■■■■□ 3.03
SURF1-205ENST00000615505 C1orf141Q5JVX7 400 aa33.99■■■■□ 3.03
SURF1-205ENST00000615505 ZNF316A6NFI3 1004 aaPredicted RBP33.96■■■■□ 3.03
SURF1-205ENST00000615505 DCAF5Q96JK2 942 aa33.96■■■■□ 3.03
SURF1-205ENST00000615505 SLC27A3Q5K4L6 730 aa33.94■■■■□ 3.02
SURF1-205ENST00000615505 TMOD3Q9NYL9 352 aa33.93■■■■□ 3.02
SURF1-205ENST00000615505 TOGARAM1Q9Y4F4 1720 aa33.93■■■■□ 3.02
SURF1-205ENST00000615505 PIGBQ92521 554 aa33.92■■■■□ 3.02
SURF1-205ENST00000615505 ERVV-2B6SEH9 535 aa33.91■■■■□ 3.02
SURF1-205ENST00000615505 U2AF1L5P0DN76 240 aaPredicted RBP33.91■■■■□ 3.02
SURF1-205ENST00000615505 U2AF1Q01081 240 aaKnown RBP eCLIP33.91■■■■□ 3.02
SURF1-205ENST00000615505 AKAP4Q5JQC9 854 aa33.9■■■■□ 3.02
SURF1-205ENST00000615505 SMARCC1Q92922 1105 aaPredicted RBP33.9■■■■□ 3.02
SURF1-205ENST00000615505 STK32BQ9NY57 414 aa33.9■■■■□ 3.02
SURF1-205ENST00000615505 ITGB4P16144 1822 aa33.89■■■■□ 3.02
SURF1-205ENST00000615505 ANO8Q9HCE9 1232 aaPredicted RBP33.89■■■■□ 3.02
SURF1-205ENST00000615505 LRRC4BQ9NT99 713 aa33.89■■■■□ 3.02
SURF1-205ENST00000615505 MTHFSDQ2M296 383 aaKnown RBP33.88■■■■□ 3.01
SURF1-205ENST00000615505 CCNL1Q9UK58 526 aaPredicted RBP33.86■■■■□ 3.01
SURF1-205ENST00000615505 PALLDQ8WX93 1383 aa33.85■■■■□ 3.01
SURF1-205ENST00000615505 MYBBP1AQ9BQG0 1328 aaKnown RBP33.85■■■■□ 3.01
SURF1-205ENST00000615505 CABP4P57796 275 aa33.85■■■■□ 3.01
SURF1-205ENST00000615505 SLC15A2Q16348 729 aa33.85■■■■□ 3.01
SURF1-205ENST00000615505 RSPH6AQ9H0K4 717 aa33.85■■■■□ 3.01
SURF1-205ENST00000615505 KDM6AO15550 1401 aaPredicted RBP33.85■■■■□ 3.01
SURF1-205ENST00000615505 FCHSD2O94868 740 aa33.84■■■■□ 3.01
SURF1-205ENST00000615505 PRKAR2BP31323 418 aa33.84■■■■□ 3.01
SURF1-205ENST00000615505 LY75O60449 1722 aa33.84■■■■□ 3.01
SURF1-205ENST00000615505 HMGB2P26583 209 aaKnown RBP33.83■■■■□ 3.01
SURF1-205ENST00000615505 GAS2L2Q8NHY3 880 aa33.83■■■■□ 3.01
SURF1-205ENST00000615505 KCNQ4P56696 695 aa33.81■■■■□ 3
SURF1-205ENST00000615505 PRKRIP1Q9H875 184 aaPredicted RBP33.8■■■■□ 3
SURF1-205ENST00000615505 ASAP1Q9ULH1 1129 aa33.79■■■■□ 3
SURF1-205ENST00000615505 NFATC2IPQ8NCF5 419 aa33.77■■■■□ 3
SURF1-205ENST00000615505 PHACTR3Q96KR7 559 aa33.77■■■■□ 3
SURF1-205ENST00000615505 ATG3Q9NT62 314 aa33.77■■■■□ 3
SURF1-205ENST00000615505 PAPPAQ13219 1627 aa33.77■■■■□ 3
SURF1-205ENST00000615505 RNMTO43148 476 aaKnown RBP33.76■■■□□ 2.99
SURF1-205ENST00000615505 LGR6Q9HBX8 967 aa33.76■■■□□ 2.99
SURF1-205ENST00000615505 GNAT3A8MTJ3 354 aa33.74■■■□□ 2.99
SURF1-205ENST00000615505 ZNF827Q17R98 1081 aa33.74■■■□□ 2.99
SURF1-205ENST00000615505 AKT1S1Q96B36 256 aa33.74■■■□□ 2.99
SURF1-205ENST00000615505 LOC102724428A0A0B4J2F2 783 aa33.73■■■□□ 2.99
SURF1-205ENST00000615505 NEFMP07197 916 aa33.73■■■□□ 2.99
SURF1-205ENST00000615505 SIK1P57059 783 aa33.73■■■□□ 2.99
SURF1-205ENST00000615505 MAP3K5Q99683 1374 aa33.72■■■□□ 2.99
SURF1-205ENST00000615505 SCN11AQ9UI33 1791 aa33.72■■■□□ 2.99
SURF1-205ENST00000615505 PNNQ9H307 717 aaKnown RBP33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms