RNA–Protein interactions for RNA: ENST00000615471.4

SMIM22-210, Transcript of small integral membrane protein 22, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SMIM22, Length 928 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-210ENST00000615471 SHANK3Q9BYB0 1731 aa23.46■■□□□ 1.35
SMIM22-210ENST00000615471 BCL11BQ9C0K0 894 aaPredicted RBP23.46■■□□□ 1.35
SMIM22-210ENST00000615471 RREB1Q92766 1687 aa23.45■■□□□ 1.34
SMIM22-210ENST00000615471 EZH2Q15910 746 aaKnown RBP23.45■■□□□ 1.34
SMIM22-210ENST00000615471 RGPD3A6NKT7 1758 aaPredicted RBP23.45■■□□□ 1.34
SMIM22-210ENST00000615471 RGPD4Q7Z3J3 1758 aa23.45■■□□□ 1.34
SMIM22-210ENST00000615471 DDX54Q8TDD1 881 aaKnown RBP23.44■■□□□ 1.34
SMIM22-210ENST00000615471 PKD1L3Q7Z443 1732 aa23.42■■□□□ 1.34
SMIM22-210ENST00000615471 PLSCR1O15162 318 aa23.42■■□□□ 1.34
SMIM22-210ENST00000615471 NHSQ6T4R5 1651 aa23.41■■□□□ 1.34
SMIM22-210ENST00000615471 IGSF1Q8N6C5 1336 aa23.41■■□□□ 1.34
SMIM22-210ENST00000615471 CNGB1Q14028 1251 aaPredicted RBP23.41■■□□□ 1.34
SMIM22-210ENST00000615471 PTF1AQ7RTS3 328 aa23.41■■□□□ 1.34
SMIM22-210ENST00000615471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.41■■□□□ 1.34
SMIM22-210ENST00000615471 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
SMIM22-210ENST00000615471 KAT6BQ8WYB5 2073 aa23.39■■□□□ 1.34
SMIM22-210ENST00000615471 IL13P35225 146 aa23.39■■□□□ 1.33
SMIM22-210ENST00000615471 NUP188Q5SRE5 1749 aa23.39■■□□□ 1.33
SMIM22-210ENST00000615471 SPG7Q9UQ90 795 aa23.38■■□□□ 1.33
SMIM22-210ENST00000615471 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
SMIM22-210ENST00000615471 PCDH11XQ9BZA7 1347 aa23.36■■□□□ 1.33
SMIM22-210ENST00000615471 PCDH11YQ9BZA8 1340 aa23.36■■□□□ 1.33
SMIM22-210ENST00000615471 DDX10Q13206 875 aaKnown RBP23.36■■□□□ 1.33
SMIM22-210ENST00000615471 KCNQ2O43526 872 aa23.35■■□□□ 1.33
SMIM22-210ENST00000615471 DIAPH1O60610 1272 aaKnown RBP23.35■■□□□ 1.33
SMIM22-210ENST00000615471 DOT1LQ8TEK3 1739 aa23.34■■□□□ 1.33
SMIM22-210ENST00000615471 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
SMIM22-210ENST00000615471 CYP27B1O15528 508 aa23.33■■□□□ 1.33
SMIM22-210ENST00000615471 KDRP35968 1356 aa23.32■■□□□ 1.32
SMIM22-210ENST00000615471 PPP2R1AP30153 589 aa23.32■■□□□ 1.32
SMIM22-210ENST00000615471 SULT6B1Q6IMI4 303 aa23.32■■□□□ 1.32
SMIM22-210ENST00000615471 NKX1-1Q15270 411 aaPredicted RBP23.31■■□□□ 1.32
SMIM22-210ENST00000615471 PROM2Q8N271 834 aa23.31■■□□□ 1.32
SMIM22-210ENST00000615471 CFAP53Q96M91 514 aa23.31■■□□□ 1.32
SMIM22-210ENST00000615471 PRIM1P49642 420 aaKnown RBP23.3■■□□□ 1.32
SMIM22-210ENST00000615471 AMOTQ4VCS5 1084 aa23.3■■□□□ 1.32
SMIM22-210ENST00000615471 PLEKHO1Q53GL0 409 aaPredicted RBP23.3■■□□□ 1.32
SMIM22-210ENST00000615471 BTAF1O14981 1849 aa23.3■■□□□ 1.32
SMIM22-210ENST00000615471 AEBP1Q8IUX7 1158 aa23.29■■□□□ 1.32
SMIM22-210ENST00000615471 IFNL2Q8IZJ0 200 aa23.29■■□□□ 1.32
SMIM22-210ENST00000615471 PSDA5PKW4 1024 aaPredicted RBP23.28■■□□□ 1.32
SMIM22-210ENST00000615471 R3HDM1Q15032 1099 aaKnown RBP23.27■■□□□ 1.32
SMIM22-210ENST00000615471 PHKG2P15735 406 aa23.26■■□□□ 1.31
SMIM22-210ENST00000615471 RALBP1Q15311 655 aa23.26■■□□□ 1.31
SMIM22-210ENST00000615471 TXNRD1Q16881 649 aa23.26■■□□□ 1.31
SMIM22-210ENST00000615471 NBPF14Q5TI25 921 aa23.26■■□□□ 1.31
SMIM22-210ENST00000615471 SYTL4Q96C24 671 aaPredicted RBP23.26■■□□□ 1.31
SMIM22-210ENST00000615471 TOGARAM1Q9Y4F4 1720 aa23.25■■□□□ 1.31
SMIM22-210ENST00000615471 NUDCQ9Y266 331 aa23.25■■□□□ 1.31
SMIM22-210ENST00000615471 LRP5O75197 1615 aa23.23■■□□□ 1.31
SMIM22-210ENST00000615471 ZNF316A6NFI3 1004 aaPredicted RBP23.23■■□□□ 1.31
SMIM22-210ENST00000615471 HSP90AB1P08238 724 aaKnown RBP23.23■■□□□ 1.31
SMIM22-210ENST00000615471 U2SURPO15042 1029 aaKnown RBP23.22■■□□□ 1.31
SMIM22-210ENST00000615471 HMOX1P09601 288 aa23.22■■□□□ 1.31
SMIM22-210ENST00000615471 ANO8Q9HCE9 1232 aaPredicted RBP23.21■■□□□ 1.31
SMIM22-210ENST00000615471 PAPPAQ13219 1627 aa23.2■■□□□ 1.3
SMIM22-210ENST00000615471 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.3
SMIM22-210ENST00000615471 MPRIPQ6WCQ1 1025 aa23.19■■□□□ 1.3
SMIM22-210ENST00000615471 DCAF5Q96JK2 942 aa23.19■■□□□ 1.3
SMIM22-210ENST00000615471 ITGB4P16144 1822 aa23.19■■□□□ 1.3
SMIM22-210ENST00000615471 LY75O60449 1722 aa23.19■■□□□ 1.3
SMIM22-210ENST00000615471 ERVV-2B6SEH9 535 aa23.18■■□□□ 1.3
SMIM22-210ENST00000615471 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
SMIM22-210ENST00000615471 SRCAPQ6ZRS2 3230 aa23.17■■□□□ 1.3
SMIM22-210ENST00000615471 SLC27A3Q5K4L6 730 aa23.17■■□□□ 1.3
SMIM22-210ENST00000615471 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
SMIM22-210ENST00000615471 PIGBQ92521 554 aa23.15■■□□□ 1.3
SMIM22-210ENST00000615471 LRRC4BQ9NT99 713 aa23.15■■□□□ 1.3
SMIM22-210ENST00000615471 FCHSD2O94868 740 aa23.14■■□□□ 1.29
SMIM22-210ENST00000615471 U2AF1L5P0DN76 240 aaPredicted RBP23.14■■□□□ 1.29
SMIM22-210ENST00000615471 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.29
SMIM22-210ENST00000615471 U2AF1Q01081 240 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMIM22-210ENST00000615471 SMARCC1Q92922 1105 aaPredicted RBP23.14■■□□□ 1.29
SMIM22-210ENST00000615471 TMOD3Q9NYL9 352 aa23.14■■□□□ 1.29
SMIM22-210ENST00000615471 CASZ1Q86V15 1759 aa23.14■■□□□ 1.29
SMIM22-210ENST00000615471 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
SMIM22-210ENST00000615471 SLC15A2Q16348 729 aa23.13■■□□□ 1.29
SMIM22-210ENST00000615471 MTHFSDQ2M296 383 aaKnown RBP23.12■■□□□ 1.29
SMIM22-210ENST00000615471 RSPH6AQ9H0K4 717 aa23.12■■□□□ 1.29
SMIM22-210ENST00000615471 STK32BQ9NY57 414 aa23.12■■□□□ 1.29
SMIM22-210ENST00000615471 KDM6AO15550 1401 aaPredicted RBP23.11■■□□□ 1.29
SMIM22-210ENST00000615471 PRKRIP1Q9H875 184 aaPredicted RBP23.11■■□□□ 1.29
SMIM22-210ENST00000615471 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
SMIM22-210ENST00000615471 CABP4P57796 275 aa23.1■■□□□ 1.29
SMIM22-210ENST00000615471 PRKAR2BP31323 418 aa23.09■■□□□ 1.29
SMIM22-210ENST00000615471 GAS2L2Q8NHY3 880 aa23.09■■□□□ 1.29
SMIM22-210ENST00000615471 VIRMAQ69YN4 1812 aaKnown RBP23.08■■□□□ 1.29
SMIM22-210ENST00000615471 AKT1S1Q96B36 256 aa23.08■■□□□ 1.29
SMIM22-210ENST00000615471 CCNL1Q9UK58 526 aaPredicted RBP23.08■■□□□ 1.29
SMIM22-210ENST00000615471 PALLDQ8WX93 1383 aa23.08■■□□□ 1.29
SMIM22-210ENST00000615471 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.29
SMIM22-210ENST00000615471 ZNF827Q17R98 1081 aa23.07■■□□□ 1.28
SMIM22-210ENST00000615471 QSER1Q2KHR3 1735 aa23.06■■□□□ 1.28
SMIM22-210ENST00000615471 NFATC2IPQ8NCF5 419 aa23.06■■□□□ 1.28
SMIM22-210ENST00000615471 PHACTR3Q96KR7 559 aa23.06■■□□□ 1.28
SMIM22-210ENST00000615471 RNMTO43148 476 aaKnown RBP23.05■■□□□ 1.28
SMIM22-210ENST00000615471 PNNQ9H307 717 aaKnown RBP23.05■■□□□ 1.28
SMIM22-210ENST00000615471 ATG3Q9NT62 314 aa23.05■■□□□ 1.28
SMIM22-210ENST00000615471 ASAP1Q9ULH1 1129 aa23.05■■□□□ 1.28
SMIM22-210ENST00000615471 MRC1P22897 1456 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms