RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 EXOSC9Q06265 439 aaKnown RBP11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 STK32BQ9NY57 414 aa11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 PIK3C2GO75747 1445 aa11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 IL2RBP14784 551 aa11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 SKOR2Q2VWA4 1001 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 DNAI2Q9GZS0 605 aa11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 ABCA8O94911 1581 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 SPTY2D1Q68D10 685 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 ARHGEF12Q9NZN5 1544 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 BICDL1Q6ZP65 573 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 LRRCC1Q9C099 1032 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 ANKRD18BA2A2Z9 1011 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 ANKRD1Q15327 319 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 MPRIPQ6WCQ1 1025 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 NME9Q86XW9 330 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 NLRP1Q9C000 1473 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 NKTRP30414 1462 aaKnown RBP11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 MYO1BO43795 1136 aa11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 MPHOSPH6Q99547 160 aaKnown RBP11.69□□□□□ -0.54
TNFRSF9-204ENST00000615230 MCM2P49736 904 aa11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 GSTO1P78417 241 aa11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 NOC3LQ8WTT2 800 aaKnown RBP11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 SIRT1Q96EB6 747 aa11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 HDAC9Q9UKV0 1011 aa11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 LDHCP07864 332 aa11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 EHMT1Q9H9B1 1298 aa11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 DBF4Q9UBU7 674 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 MSNP26038 577 aaKnown RBP11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 MCTP1Q6DN14 999 aa11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 ANKIB1Q9P2G1 1089 aa11.68□□□□□ -0.54
TNFRSF9-204ENST00000615230 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 ZCCHC11Q5TAX3 1644 aaKnown RBP11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 HECW2Q9P2P5 1572 aa11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 RPAP2Q8IXW5 612 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 PTPRCP08575 1304 aa11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 TXLNAP40222 546 aa11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 SOGA3Q5TF21 947 aa11.67□□□□□ -0.54
TNFRSF9-204ENST00000615230 KDM6BO15054 1643 aa11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 CDKL5O76039 1030 aa11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 RAI14Q9P0K7 980 aa11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 ZSCAN29Q8IWY8 852 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 TMPOP42166 694 aaKnown RBP11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 ZNF772Q68DY9 489 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 ZGPATQ8N5A5 531 aaKnown RBP11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 METTL24Q5JXM2 366 aa11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 TRMT112Q9UI30 125 aaKnown RBP11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 SMC3Q9UQE7 1217 aa11.66□□□□□ -0.54
TNFRSF9-204ENST00000615230 FLT4P35916 1363 aa11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 YTHDC2Q9H6S0 1430 aaKnown RBP11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 IL16Q14005 1332 aa11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 WASF1Q92558 559 aa11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 CCDC69A6NI79 296 aa11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 NOB1Q9ULX3 412 aaKnown RBP11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 TNIP1Q15025 636 aa11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
TNFRSF9-204ENST00000615230 TRIM22Q8IYM9 498 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 KRT32Q14532 448 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 DUSP27Q5VZP5 1158 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 NOL8Q76FK4 1167 aaKnown RBP11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 CDK5RAP3Q96JB5 506 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 TRIM21P19474 475 aaKnown RBP11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 NPATQ14207 1427 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 PIK3R4Q99570 1358 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 TMEM2Q9UHN6 1383 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 BAG6P46379 1132 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 KDM5CP41229 1560 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 TMEM132AQ24JP5 1023 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 PLXNC1O60486 1568 aa11.64□□□□□ -0.55
TNFRSF9-204ENST00000615230 NF2P35240 595 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 MAGI3Q5TCQ9 1506 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 YEATS2Q9ULM3 1422 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 GOLGA6L19H0YKK7 550 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 CRACR2BQ8N4Y2 399 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 FLAD1Q8NFF5 587 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 SETDB2Q96T68 719 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 ATP6V1AP38606 617 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 HSPA2P54652 639 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 TRAF1Q13077 416 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 DZIP1Q86YF9 867 aaKnown RBP11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 ASXL1Q8IXJ9 1541 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms