RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 CRB1P82279 1406 aa24.86■■□□□ 1.57
SMARCD2-212ENST00000613943 XRN1Q8IZH2 1706 aaKnown RBP24.86■■□□□ 1.57
SMARCD2-212ENST00000613943 PLEKHG5O94827 1062 aa24.85■■□□□ 1.57
SMARCD2-212ENST00000613943 SPRYD3Q8NCJ5 442 aa24.85■■□□□ 1.57
SMARCD2-212ENST00000613943 RTF1Q92541 710 aaKnown RBP24.84■■□□□ 1.57
SMARCD2-212ENST00000613943 TBC1D2Q9BYX2 928 aa24.84■■□□□ 1.57
SMARCD2-212ENST00000613943 C22orf23Q9BZE7 217 aa24.84■■□□□ 1.57
SMARCD2-212ENST00000613943 TSPYL4Q9UJ04 414 aa24.84■■□□□ 1.57
SMARCD2-212ENST00000613943 BECN1Q14457 450 aa24.83■■□□□ 1.57
SMARCD2-212ENST00000613943 USHBP1Q8N6Y0 703 aa24.83■■□□□ 1.57
SMARCD2-212ENST00000613943 IGSF1Q8N6C5 1336 aa24.83■■□□□ 1.57
SMARCD2-212ENST00000613943 RGS12O14924 1447 aa24.83■■□□□ 1.57
SMARCD2-212ENST00000613943 HOXC9P31274 260 aa24.83■■□□□ 1.56
SMARCD2-212ENST00000613943 SLC4A2P04920 1241 aa24.82■■□□□ 1.56
SMARCD2-212ENST00000613943 GCC1Q96CN9 775 aa24.81■■□□□ 1.56
SMARCD2-212ENST00000613943 KDRP35968 1356 aa24.8■■□□□ 1.56
SMARCD2-212ENST00000613943 G2E3Q7L622 706 aa24.8■■□□□ 1.56
SMARCD2-212ENST00000613943 CHMP4BQ9H444 224 aaKnown RBP24.8■■□□□ 1.56
SMARCD2-212ENST00000613943 FMN2Q9NZ56 1722 aa24.8■■□□□ 1.56
SMARCD2-212ENST00000613943 MSH6P52701 1360 aa24.79■■□□□ 1.56
SMARCD2-212ENST00000613943 NECTIN2Q92692 538 aa24.79■■□□□ 1.56
SMARCD2-212ENST00000613943 ZBTB7CA1YPR0 619 aa24.79■■□□□ 1.56
SMARCD2-212ENST00000613943 F6X3S4 739 aa24.79■■□□□ 1.56
SMARCD2-212ENST00000613943 KIAA0232Q92628 1395 aa24.78■■□□□ 1.56
SMARCD2-212ENST00000613943 INTS3Q68E01 1043 aaKnown RBP24.78■■□□□ 1.56
SMARCD2-212ENST00000613943 MEIS3Q99687 375 aa24.78■■□□□ 1.56
SMARCD2-212ENST00000613943 ANKARQ7Z5J8 1434 aa24.77■■□□□ 1.56
SMARCD2-212ENST00000613943 ANKLE2Q86XL3 938 aa24.77■■□□□ 1.56
SMARCD2-212ENST00000613943 APBB1O00213 710 aa24.77■■□□□ 1.56
SMARCD2-212ENST00000613943 PHF8Q9UPP1 1060 aa24.77■■□□□ 1.56
SMARCD2-212ENST00000613943 SLC4A10Q6U841 1118 aa24.76■■□□□ 1.55
SMARCD2-212ENST00000613943 C16orf71Q8IYS4 520 aaPredicted RBP24.75■■□□□ 1.55
SMARCD2-212ENST00000613943 GAS2L2Q8NHY3 880 aa24.75■■□□□ 1.55
SMARCD2-212ENST00000613943 ESCO1Q5FWF5 840 aa24.74■■□□□ 1.55
SMARCD2-212ENST00000613943 XPCQ01831 940 aaPredicted RBP24.74■■□□□ 1.55
SMARCD2-212ENST00000613943 BMP2KLQ5H9B9 411 aa24.74■■□□□ 1.55
SMARCD2-212ENST00000613943 ANTXR1Q9H6X2 564 aa24.72■■□□□ 1.55
SMARCD2-212ENST00000613943 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
SMARCD2-212ENST00000613943 ATP10DQ9P241 1426 aa24.72■■□□□ 1.55
SMARCD2-212ENST00000613943 CEP85Q6P2H3 762 aa24.72■■□□□ 1.55
SMARCD2-212ENST00000613943 OTUD7AQ8TE49 926 aaPredicted RBP24.72■■□□□ 1.55
SMARCD2-212ENST00000613943 GNAT3A8MTJ3 354 aa24.71■■□□□ 1.55
SMARCD2-212ENST00000613943 HAP1P54257 671 aaPredicted RBP24.71■■□□□ 1.55
SMARCD2-212ENST00000613943 IL17REQ8NFR9 667 aa24.71■■□□□ 1.55
SMARCD2-212ENST00000613943 PTPRCP08575 1304 aa24.71■■□□□ 1.55
SMARCD2-212ENST00000613943 NWD1Q149M9 1564 aa24.7■■□□□ 1.54
SMARCD2-212ENST00000613943 SMARCA5O60264 1052 aaPredicted RBP24.7■■□□□ 1.54
SMARCD2-212ENST00000613943 RTL1A6NKG5 1358 aa24.7■■□□□ 1.54
SMARCD2-212ENST00000613943 GSPT1P15170 499 aaKnown RBP24.69■■□□□ 1.54
SMARCD2-212ENST00000613943 DCTPP1Q9H773 170 aa24.69■■□□□ 1.54
SMARCD2-212ENST00000613943 TBC1D9Q6ZT07 1266 aa24.69■■□□□ 1.54
SMARCD2-212ENST00000613943 ANKRD44Q8N8A2 993 aa24.69■■□□□ 1.54
SMARCD2-212ENST00000613943 KIF24Q5T7B8 1368 aa24.68■■□□□ 1.54
SMARCD2-212ENST00000613943 PSME1Q06323 249 aa24.68■■□□□ 1.54
SMARCD2-212ENST00000613943 PLEKHM2Q8IWE5 1019 aa24.67■■□□□ 1.54
SMARCD2-212ENST00000613943 ORAI2Q96SN7 254 aa24.67■■□□□ 1.54
SMARCD2-212ENST00000613943 GSE1Q14687 1217 aa24.66■■□□□ 1.54
SMARCD2-212ENST00000613943 NBPF6Q5VWK0 638 aa24.65■■□□□ 1.54
SMARCD2-212ENST00000613943 NBPF4Q96M43 638 aa24.65■■□□□ 1.54
SMARCD2-212ENST00000613943 LRRC59Q96AG4 307 aaKnown RBP24.64■■□□□ 1.54
SMARCD2-212ENST00000613943 MAP3K5Q99683 1374 aa24.64■■□□□ 1.54
SMARCD2-212ENST00000613943 LMOD2Q6P5Q4 547 aa24.63■■□□□ 1.53
SMARCD2-212ENST00000613943 STK31Q9BXU1 1019 aa24.63■■□□□ 1.53
SMARCD2-212ENST00000613943 SETD1BQ9UPS6 1966 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-212ENST00000613943 FKBP5Q13451 457 aaPredicted RBP24.63■■□□□ 1.53
SMARCD2-212ENST00000613943 CHD2O14647 1828 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-212ENST00000613943 RBM25P49756 843 aaKnown RBP24.62■■□□□ 1.53
SMARCD2-212ENST00000613943 RPAP2Q8IXW5 612 aaPredicted RBP24.62■■□□□ 1.53
SMARCD2-212ENST00000613943 FLIIQ13045 1269 aa24.62■■□□□ 1.53
SMARCD2-212ENST00000613943 IP6K1Q92551 441 aa24.61■■□□□ 1.53
SMARCD2-212ENST00000613943 LGR6Q9HBX8 967 aa24.6■■□□□ 1.53
SMARCD2-212ENST00000613943 HTATSF1O43719 755 aaKnown RBP24.6■■□□□ 1.53
SMARCD2-212ENST00000613943 KIF2CQ99661 725 aa24.6■■□□□ 1.53
SMARCD2-212ENST00000613943 RBM42Q9BTD8 480 aaKnown RBP24.6■■□□□ 1.53
SMARCD2-212ENST00000613943 TAF7Q15545 349 aaPredicted RBP24.59■■□□□ 1.53
SMARCD2-212ENST00000613943 HSCBQ8IWL3 235 aa24.59■■□□□ 1.53
SMARCD2-212ENST00000613943 ADGRL3Q9HAR2 1447 aa24.59■■□□□ 1.53
SMARCD2-212ENST00000613943 CD2BP2O95400 341 aaKnown RBP24.58■■□□□ 1.53
SMARCD2-212ENST00000613943 CCDC30Q5VVM6 783 aa24.58■■□□□ 1.53
SMARCD2-212ENST00000613943 TTC22Q5TAA0 569 aa24.57■■□□□ 1.52
SMARCD2-212ENST00000613943 LTN1O94822 1766 aa24.57■■□□□ 1.52
SMARCD2-212ENST00000613943 CDC45O75419 566 aa24.57■■□□□ 1.52
SMARCD2-212ENST00000613943 CCT4P50991 539 aaKnown RBP24.57■■□□□ 1.52
SMARCD2-212ENST00000613943 LRRC37A3O60309 1634 aa24.56■■□□□ 1.52
SMARCD2-212ENST00000613943 EXOC6BQ9Y2D4 811 aa24.56■■□□□ 1.52
SMARCD2-212ENST00000613943 PHAXQ9H814 394 aaKnown RBP24.56■■□□□ 1.52
SMARCD2-212ENST00000613943 NFAT5O94916 1531 aa24.55■■□□□ 1.52
SMARCD2-212ENST00000613943 KCNQ3O43525 872 aa24.55■■□□□ 1.52
SMARCD2-212ENST00000613943 EIF2S2P20042 333 aaKnown RBP24.55■■□□□ 1.52
SMARCD2-212ENST00000613943 TSHZ3Q63HK5 1081 aa24.55■■□□□ 1.52
SMARCD2-212ENST00000613943 HDGFL1Q5TGJ6 251 aa24.53■■□□□ 1.52
SMARCD2-212ENST00000613943 FOXD4L1Q9NU39 408 aa24.53■■□□□ 1.52
SMARCD2-212ENST00000613943 NPHP4O75161 1426 aaPredicted RBP24.53■■□□□ 1.52
SMARCD2-212ENST00000613943 USP54Q70EL1 1684 aa24.52■■□□□ 1.52
SMARCD2-212ENST00000613943 PNMA6EA0A0J9YXQ4 647 aa24.52■■□□□ 1.52
SMARCD2-212ENST00000613943 GCP02774 474 aa24.52■■□□□ 1.52
SMARCD2-212ENST00000613943 GNAI2P04899 355 aa24.52■■□□□ 1.52
SMARCD2-212ENST00000613943 MPRIPQ6WCQ1 1025 aa24.52■■□□□ 1.52
SMARCD2-212ENST00000613943 SDSP20132 328 aa24.52■■□□□ 1.52
SMARCD2-212ENST00000613943 ZNF142P52746 1687 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms