RNA–Protein interactions for RNA: ENST00000612880.4

YTHDF3-206, Transcript of YTH N6-methyladenosine RNA binding protein 3, human

TSL 2

Gene YTHDF3, Length 593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YTHDF3-206	ENST00000612880	APBA3	O96018	575 aa		27.98	■■■□□ 2.07
YTHDF3-206	ENST00000612880	IL13	P35225	146 aa		27.98	■■■□□ 2.07
YTHDF3-206	ENST00000612880	DEFB132	Q7Z7B7	95 aa		27.98	■■■□□ 2.07
YTHDF3-206	ENST00000612880	PCDH11X	Q9BZA7	1347 aa		27.97	■■■□□ 2.07
YTHDF3-206	ENST00000612880	PCDH11Y	Q9BZA8	1340 aa		27.97	■■■□□ 2.07
YTHDF3-206	ENST00000612880	KAT6B	Q8WYB5	2073 aa		27.97	■■■□□ 2.07
YTHDF3-206	ENST00000612880	PLSCR1	O15162	318 aa		27.97	■■■□□ 2.07
YTHDF3-206	ENST00000612880	SPG7	Q9UQ90	795 aa		27.97	■■■□□ 2.07
YTHDF3-206	ENST00000612880	DDX54	Q8TDD1	881 aa	Known RBP	27.96	■■■□□ 2.07
YTHDF3-206	ENST00000612880	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.96	■■■□□ 2.07
YTHDF3-206	ENST00000612880	RGPD4	Q7Z3J3	1758 aa		27.96	■■■□□ 2.07
YTHDF3-206	ENST00000612880	PKD1L3	Q7Z443	1732 aa		27.95	■■■□□ 2.07
YTHDF3-206	ENST00000612880	SHANK3	Q9BYB0	1731 aa		27.95	■■■□□ 2.07
YTHDF3-206	ENST00000612880	CAMKK2	Q96RR4	588 aa		27.95	■■■□□ 2.06
YTHDF3-206	ENST00000612880	KDR	P35968	1356 aa		27.94	■■■□□ 2.06
YTHDF3-206	ENST00000612880	NHS	Q6T4R5	1651 aa		27.94	■■■□□ 2.06
YTHDF3-206	ENST00000612880	DIAPH1	O60610	1272 aa	Known RBP	27.93	■■■□□ 2.06
YTHDF3-206	ENST00000612880	EN1	Q05925	392 aa	Predicted RBP	27.93	■■■□□ 2.06
YTHDF3-206	ENST00000612880	CFAP53	Q96M91	514 aa		27.92	■■■□□ 2.06
YTHDF3-206	ENST00000612880	AMOT	Q4VCS5	1084 aa		27.91	■■■□□ 2.06
YTHDF3-206	ENST00000612880	DDX10	Q13206	875 aa	Known RBP	27.9	■■■□□ 2.06
YTHDF3-206	ENST00000612880	PPP2R1A	P30153	589 aa		27.89	■■■□□ 2.06
YTHDF3-206	ENST00000612880	NKX1-1	Q15270	411 aa	Predicted RBP	27.89	■■■□□ 2.06
YTHDF3-206	ENST00000612880	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.88	■■■□□ 2.05
YTHDF3-206	ENST00000612880	RALBP1	Q15311	655 aa		27.87	■■■□□ 2.05
YTHDF3-206	ENST00000612880	COL3A1	P02461	1466 aa	Predicted RBP	27.87	■■■□□ 2.05
YTHDF3-206	ENST00000612880	CYP27B1	O15528	508 aa		27.86	■■■□□ 2.05
YTHDF3-206	ENST00000612880	EZH2	Q15910	746 aa	Known RBP	27.86	■■■□□ 2.05
YTHDF3-206	ENST00000612880	SULT6B1	Q6IMI4	303 aa		27.86	■■■□□ 2.05
YTHDF3-206	ENST00000612880	IFNL2	Q8IZJ0	200 aa		27.86	■■■□□ 2.05
YTHDF3-206	ENST00000612880	KCNQ2	O43526	872 aa		27.84	■■■□□ 2.05
YTHDF3-206	ENST00000612880	CNGB1	Q14028	1251 aa	Predicted RBP	27.84	■■■□□ 2.05
YTHDF3-206	ENST00000612880	RREB1	Q92766	1687 aa		27.84	■■■□□ 2.05
YTHDF3-206	ENST00000612880	HSP90AB1	P08238	724 aa	Known RBP	27.83	■■■□□ 2.05
YTHDF3-206	ENST00000612880	ACSBG1	Q96GR2	724 aa		27.83	■■■□□ 2.05
YTHDF3-206	ENST00000612880	NUDC	Q9Y266	331 aa		27.83	■■■□□ 2.05
YTHDF3-206	ENST00000612880	PHKG2	P15735	406 aa		27.81	■■■□□ 2.04
YTHDF3-206	ENST00000612880	HMGB2	P26583	209 aa	Known RBP	27.81	■■■□□ 2.04
YTHDF3-206	ENST00000612880	PTF1A	Q7RTS3	328 aa		27.81	■■■□□ 2.04
YTHDF3-206	ENST00000612880	BTAF1	O14981	1849 aa		27.81	■■■□□ 2.04
YTHDF3-206	ENST00000612880	PRIM1	P49642	420 aa	Known RBP	27.8	■■■□□ 2.04
YTHDF3-206	ENST00000612880	AEBP1	Q8IUX7	1158 aa		27.8	■■■□□ 2.04
YTHDF3-206	ENST00000612880	DOT1L	Q8TEK3	1739 aa		27.8	■■■□□ 2.04
YTHDF3-206	ENST00000612880	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.79	■■■□□ 2.04
YTHDF3-206	ENST00000612880	NBPF14	Q5TI25	921 aa		27.78	■■■□□ 2.04
YTHDF3-206	ENST00000612880	TXNRD1	Q16881	649 aa		27.75	■■■□□ 2.03
YTHDF3-206	ENST00000612880	SYTL4	Q96C24	671 aa	Predicted RBP	27.75	■■■□□ 2.03
YTHDF3-206	ENST00000612880	DCAF5	Q96JK2	942 aa		27.75	■■■□□ 2.03
YTHDF3-206	ENST00000612880	NUP188	Q5SRE5	1749 aa		27.75	■■■□□ 2.03
YTHDF3-206	ENST00000612880	C1orf141	Q5JVX7	400 aa		27.74	■■■□□ 2.03
YTHDF3-206	ENST00000612880	SLC27A3	Q5K4L6	730 aa		27.74	■■■□□ 2.03
YTHDF3-206	ENST00000612880	PROM2	Q8N271	834 aa		27.74	■■■□□ 2.03
YTHDF3-206	ENST00000612880	ERVV-2	B6SEH9	535 aa		27.73	■■■□□ 2.03
YTHDF3-206	ENST00000612880	U2SURP	O15042	1029 aa	Known RBP	27.73	■■■□□ 2.03
YTHDF3-206	ENST00000612880	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.73	■■■□□ 2.03
YTHDF3-206	ENST00000612880	ITGB4	P16144	1822 aa		27.72	■■■□□ 2.03
YTHDF3-206	ENST00000612880	HMOX1	P09601	288 aa		27.72	■■■□□ 2.03
YTHDF3-206	ENST00000612880	FCHSD2	O94868	740 aa		27.7	■■■□□ 2.02
YTHDF3-206	ENST00000612880	AKAP4	Q5JQC9	854 aa		27.7	■■■□□ 2.02
YTHDF3-206	ENST00000612880	SMARCC1	Q92922	1105 aa	Predicted RBP	27.7	■■■□□ 2.02
YTHDF3-206	ENST00000612880	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.69	■■■□□ 2.02
YTHDF3-206	ENST00000612880	TOGARAM1	Q9Y4F4	1720 aa		27.69	■■■□□ 2.02
YTHDF3-206	ENST00000612880	LY75	O60449	1722 aa		27.68	■■■□□ 2.02
YTHDF3-206	ENST00000612880	MPRIP	Q6WCQ1	1025 aa		27.67	■■■□□ 2.02
YTHDF3-206	ENST00000612880	TMOD3	Q9NYL9	352 aa		27.67	■■■□□ 2.02
YTHDF3-206	ENST00000612880	GAS2L2	Q8NHY3	880 aa		27.66	■■■□□ 2.02
YTHDF3-206	ENST00000612880	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.65	■■■□□ 2.02
YTHDF3-206	ENST00000612880	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.65	■■■□□ 2.02	2e-9	■■□□□ 13.9
YTHDF3-206	ENST00000612880	RSPH6A	Q9H0K4	717 aa		27.65	■■■□□ 2.02
YTHDF3-206	ENST00000612880	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.65	■■■□□ 2.02
YTHDF3-206	ENST00000612880	PIGB	Q92521	554 aa		27.64	■■■□□ 2.02
YTHDF3-206	ENST00000612880	PNN	Q9H307	717 aa	Known RBP	27.64	■■■□□ 2.02
YTHDF3-206	ENST00000612880	MTHFSD	Q2M296	383 aa	Known RBP	27.63	■■■□□ 2.01
YTHDF3-206	ENST00000612880	SCN11A	Q9UI33	1791 aa		27.61	■■■□□ 2.01
YTHDF3-206	ENST00000612880	KDM6A	O15550	1401 aa	Predicted RBP	27.61	■■■□□ 2.01
YTHDF3-206	ENST00000612880	STK32B	Q9NY57	414 aa		27.61	■■■□□ 2.01
YTHDF3-206	ENST00000612880	R3HDM1	Q15032	1099 aa	Known RBP	27.6	■■■□□ 2.01
YTHDF3-206	ENST00000612880	PALLD	Q8WX93	1383 aa		27.6	■■■□□ 2.01
YTHDF3-206	ENST00000612880	PRKAR2B	P31323	418 aa		27.59	■■■□□ 2.01
YTHDF3-206	ENST00000612880	CABP4	P57796	275 aa		27.59	■■■□□ 2.01
YTHDF3-206	ENST00000612880	SLC15A2	Q16348	729 aa		27.59	■■■□□ 2.01
YTHDF3-206	ENST00000612880	PAPPA	Q13219	1627 aa		27.59	■■■□□ 2.01
YTHDF3-206	ENST00000612880	LRRC4B	Q9NT99	713 aa		27.58	■■■□□ 2.01
YTHDF3-206	ENST00000612880	CCNL1	Q9UK58	526 aa	Predicted RBP	27.58	■■■□□ 2.01
YTHDF3-206	ENST00000612880	ADAMTS7	Q9UKP4	1686 aa		27.58	■■■□□ 2.01
YTHDF3-206	ENST00000612880	NEFM	P07197	916 aa		27.57	■■■□□ 2
YTHDF3-206	ENST00000612880	PSD	A5PKW4	1024 aa	Predicted RBP	27.56	■■■□□ 2
YTHDF3-206	ENST00000612880	GNAT3	A8MTJ3	354 aa		27.55	■■■□□ 2
YTHDF3-206	ENST00000612880	RNMT	O43148	476 aa	Known RBP	27.55	■■■□□ 2
YTHDF3-206	ENST00000612880	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.55	■■■□□ 2
YTHDF3-206	ENST00000612880	MAP3K5	Q99683	1374 aa		27.54	■■■□□ 2
YTHDF3-206	ENST00000612880	ATG3	Q9NT62	314 aa		27.54	■■■□□ 2
YTHDF3-206	ENST00000612880	VIRMA	Q69YN4	1812 aa	Known RBP	27.53	■■■□□ 2
YTHDF3-206	ENST00000612880	ZNF831	Q5JPB2	1677 aa		27.53	■■■□□ 2
YTHDF3-206	ENST00000612880	MRC1	P22897	1456 aa		27.53	■■■□□ 2
YTHDF3-206	ENST00000612880	HTATSF1	O43719	755 aa	Known RBP	27.53	■■■□□ 2
YTHDF3-206	ENST00000612880	SLC52A2	Q9HAB3	445 aa		27.53	■■■□□ 2
YTHDF3-206	ENST00000612880	NFATC2IP	Q8NCF5	419 aa		27.52	■■■□□ 2
YTHDF3-206	ENST00000612880	AKT1S1	Q96B36	256 aa		27.52	■■■□□ 2
YTHDF3-206	ENST00000612880	PHACTR3	Q96KR7	559 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms