RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 RAPGEF4Q8WZA2 1011 aa22.28■■□□□ 1.16
LSP1-217ENST00000612798 USP35Q9P2H5 1018 aa22.28■■□□□ 1.16
LSP1-217ENST00000612798 RCAN3Q9UKA8 241 aa22.28■■□□□ 1.16
LSP1-217ENST00000612798 PLEKHO1Q53GL0 409 aaPredicted RBP22.28■■□□□ 1.16
LSP1-217ENST00000612798 FANCIQ9NVI1 1328 aa22.27■■□□□ 1.16
LSP1-217ENST00000612798 ZNF530Q6P9A1 599 aaPredicted RBP22.27■■□□□ 1.16
LSP1-217ENST00000612798 IL16Q14005 1332 aa22.27■■□□□ 1.16
LSP1-217ENST00000612798 GNAT3A8MTJ3 354 aa22.26■■□□□ 1.15
LSP1-217ENST00000612798 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
LSP1-217ENST00000612798 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
LSP1-217ENST00000612798 TATP17735 454 aaPredicted RBP22.26■■□□□ 1.15
LSP1-217ENST00000612798 RTF1Q92541 710 aaKnown RBP22.26■■□□□ 1.15
LSP1-217ENST00000612798 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
LSP1-217ENST00000612798 CARD10Q9BWT7 1032 aa22.25■■□□□ 1.15
LSP1-217ENST00000612798 IL17REQ8NFR9 667 aa22.24■■□□□ 1.15
LSP1-217ENST00000612798 PLCH1Q4KWH8 1693 aa22.24■■□□□ 1.15
LSP1-217ENST00000612798 AMOTQ4VCS5 1084 aa22.24■■□□□ 1.15
LSP1-217ENST00000612798 LGR6Q9HBX8 967 aa22.24■■□□□ 1.15
LSP1-217ENST00000612798 ZNF853P0CG23 659 aa22.23■■□□□ 1.15
LSP1-217ENST00000612798 EXOSC9Q06265 439 aaKnown RBP22.23■■□□□ 1.15
LSP1-217ENST00000612798 CRB1P82279 1406 aa22.23■■□□□ 1.15
LSP1-217ENST00000612798 MBIPQ9NS73 344 aa22.22■■□□□ 1.15
LSP1-217ENST00000612798 IFT57Q9NWB7 429 aa22.22■■□□□ 1.15
LSP1-217ENST00000612798 MIS18AQ9NYP9 233 aa22.22■■□□□ 1.15
LSP1-217ENST00000612798 CALD1Q05682 793 aaKnown RBP22.22■■□□□ 1.15
LSP1-217ENST00000612798 MPRIPQ6WCQ1 1025 aa22.22■■□□□ 1.15
LSP1-217ENST00000612798 LRP6O75581 1613 aa22.21■■□□□ 1.15
LSP1-217ENST00000612798 GNAI1P63096 354 aa22.21■■□□□ 1.15
LSP1-217ENST00000612798 AKAP4Q5JQC9 854 aa22.21■■□□□ 1.15
LSP1-217ENST00000612798 CFAP44Q96MT7 982 aa22.21■■□□□ 1.15
LSP1-217ENST00000612798 C8orf37Q96NL8 207 aa22.21■■□□□ 1.15
LSP1-217ENST00000612798 HTATSF1O43719 755 aaKnown RBP22.2■■□□□ 1.14
LSP1-217ENST00000612798 FKBP8Q14318 412 aa22.2■■□□□ 1.14
LSP1-217ENST00000612798 C1orf141Q5JVX7 400 aa22.2■■□□□ 1.14
LSP1-217ENST00000612798 SPG7Q9UQ90 795 aa22.18■■□□□ 1.14
LSP1-217ENST00000612798 NRAPQ86VF7 1730 aa22.18■■□□□ 1.14
LSP1-217ENST00000612798 OVOS2A0A0G2JMS6 1433 aa22.18■■□□□ 1.14
LSP1-217ENST00000612798 IL2RBP14784 551 aa22.17■■□□□ 1.14
LSP1-217ENST00000612798 SPATA31A6Q5VVP1 1343 aa22.17■■□□□ 1.14
LSP1-217ENST00000612798 RNF123Q5XPI4 1314 aa22.17■■□□□ 1.14
LSP1-217ENST00000612798 CHL1O00533 1208 aa22.17■■□□□ 1.14
LSP1-217ENST00000612798 PLIN1O60240 522 aa22.17■■□□□ 1.14
LSP1-217ENST00000612798 BCAR3O75815 825 aa22.17■■□□□ 1.14
LSP1-217ENST00000612798 NGLY1Q96IV0 654 aa22.17■■□□□ 1.14
LSP1-217ENST00000612798 CYP27B1O15528 508 aa22.16■■□□□ 1.14
LSP1-217ENST00000612798 SLIT2O94813 1529 aa22.16■■□□□ 1.14
LSP1-217ENST00000612798 LRRC37A3O60309 1634 aa22.16■■□□□ 1.14
LSP1-217ENST00000612798 RNMTO43148 476 aaKnown RBP22.15■■□□□ 1.14
LSP1-217ENST00000612798 PHKG2P15735 406 aa22.15■■□□□ 1.14
LSP1-217ENST00000612798 TSPYL6Q8N831 410 aa22.15■■□□□ 1.14
LSP1-217ENST00000612798 ELL2O00472 640 aaPredicted RBP22.15■■□□□ 1.14
LSP1-217ENST00000612798 RRP1P56182 461 aaKnown RBP22.15■■□□□ 1.14
LSP1-217ENST00000612798 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
LSP1-217ENST00000612798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.15■■□□□ 1.14
LSP1-217ENST00000612798 PKD1L3Q7Z443 1732 aa22.14■■□□□ 1.14
LSP1-217ENST00000612798 CEMIPQ8WUJ3 1361 aa22.14■■□□□ 1.14
LSP1-217ENST00000612798 NEFLP07196 543 aa22.14■■□□□ 1.13
LSP1-217ENST00000612798 ZCRB1Q8TBF4 217 aaKnown RBP22.14■■□□□ 1.13
LSP1-217ENST00000612798 PARP4Q9UKK3 1724 aaKnown RBP22.14■■□□□ 1.13
LSP1-217ENST00000612798 C8orf58Q8NAV2 365 aa22.13■■□□□ 1.13
LSP1-217ENST00000612798 BCL2L13Q9BXK5 485 aa22.13■■□□□ 1.13
LSP1-217ENST00000612798 IFNL2Q8IZJ0 200 aa22.13■■□□□ 1.13
LSP1-217ENST00000612798 TSPYL4Q9UJ04 414 aa22.13■■□□□ 1.13
LSP1-217ENST00000612798 RARSP54136 660 aaKnown RBP22.12■■□□□ 1.13
LSP1-217ENST00000612798 CCDC9Q9Y3X0 531 aaKnown RBP22.12■■□□□ 1.13
LSP1-217ENST00000612798 VIRMAQ69YN4 1812 aaKnown RBP22.11■■□□□ 1.13
LSP1-217ENST00000612798 DDX54Q8TDD1 881 aaKnown RBP22.11■■□□□ 1.13
LSP1-217ENST00000612798 SPATA31A1Q5TZJ5 1347 aa22.11■■□□□ 1.13
LSP1-217ENST00000612798 KDM6AO15550 1401 aaPredicted RBP22.11■■□□□ 1.13
LSP1-217ENST00000612798 NWD2Q9ULI1 1742 aa22.11■■□□□ 1.13
LSP1-217ENST00000612798 BCL9LQ86UU0 1499 aa22.11■■□□□ 1.13
LSP1-217ENST00000612798 TAF7Q15545 349 aaPredicted RBP22.11■■□□□ 1.13
LSP1-217ENST00000612798 UNC5CLQ8IV45 518 aa22.11■■□□□ 1.13
LSP1-217ENST00000612798 MEX3CQ5U5Q3 659 aaKnown RBP22.1■■□□□ 1.13
LSP1-217ENST00000612798 TEFQ10587 303 aa22.09■■□□□ 1.13
LSP1-217ENST00000612798 DISP2A7MBM2 1401 aa22.09■■□□□ 1.13
LSP1-217ENST00000612798 SHANK3Q9BYB0 1731 aa22.08■■□□□ 1.13
LSP1-217ENST00000612798 VAMP4O75379 141 aa22.08■■□□□ 1.13
LSP1-217ENST00000612798 FNBP4Q8N3X1 1017 aaPredicted RBP22.08■■□□□ 1.13
LSP1-217ENST00000612798 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.12
LSP1-217ENST00000612798 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.12
LSP1-217ENST00000612798 TCERG1O14776 1098 aaKnown RBP22.07■■□□□ 1.12
LSP1-217ENST00000612798 KCNQ3O43525 872 aa22.07■■□□□ 1.12
LSP1-217ENST00000612798 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
LSP1-217ENST00000612798 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
LSP1-217ENST00000612798 PLEKHG2Q9H7P9 1386 aa22.07■■□□□ 1.12
LSP1-217ENST00000612798 TWISTNBQ3B726 338 aaPredicted RBP22.07■■□□□ 1.12
LSP1-217ENST00000612798 USP21Q9UK80 565 aa22.07■■□□□ 1.12
LSP1-217ENST00000612798 ADAMTS7Q9UKP4 1686 aa22.06■■□□□ 1.12
LSP1-217ENST00000612798 C20orf194Q5TEA3 1177 aa22.06■■□□□ 1.12
LSP1-217ENST00000612798 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
LSP1-217ENST00000612798 CT47B1P0C2W7 299 aaPredicted RBP22.05■■□□□ 1.12
LSP1-217ENST00000612798 SCN11AQ9UI33 1791 aa22.05■■□□□ 1.12
LSP1-217ENST00000612798 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
LSP1-217ENST00000612798 DCAF5Q96JK2 942 aa22.05■■□□□ 1.12
LSP1-217ENST00000612798 PELP1Q8IZL8 1130 aaKnown RBP22.04■■□□□ 1.12
LSP1-217ENST00000612798 NFATC2IPQ8NCF5 419 aa22.04■■□□□ 1.12
LSP1-217ENST00000612798 WNK3Q9BYP7 1800 aa22.03■■□□□ 1.12
LSP1-217ENST00000612798 FRAT1Q92837 279 aaPredicted RBP22.03■■□□□ 1.12
LSP1-217ENST00000612798 VPS72Q15906 364 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms