RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 IL16Q14005 1332 aa14.19□□□□□ -0.14
CSPG4P10-202ENST00000612093 ZC3H6P61129 1189 aaKnown RBP14.19□□□□□ -0.14
CSPG4P10-202ENST00000612093 MCM10Q7L590 875 aa14.19□□□□□ -0.14
CSPG4P10-202ENST00000612093 CABLES1Q8TDN4 633 aa14.19□□□□□ -0.14
CSPG4P10-202ENST00000612093 IP6K1Q92551 441 aa14.19□□□□□ -0.14
CSPG4P10-202ENST00000612093 MS4A1P11836 297 aa14.19□□□□□ -0.14
CSPG4P10-202ENST00000612093 NPHP3Q7Z494 1330 aa14.18□□□□□ -0.14
CSPG4P10-202ENST00000612093 MTHFSDQ2M296 383 aaKnown RBP14.18□□□□□ -0.14
CSPG4P10-202ENST00000612093 BRINP3Q76B58 766 aa14.18□□□□□ -0.14
CSPG4P10-202ENST00000612093 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
CSPG4P10-202ENST00000612093 KIF24Q5T7B8 1368 aa14.17□□□□□ -0.14
CSPG4P10-202ENST00000612093 ELL2O00472 640 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P10-202ENST00000612093 LMOD3Q0VAK6 560 aa14.17□□□□□ -0.14
CSPG4P10-202ENST00000612093 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
CSPG4P10-202ENST00000612093 KDRP35968 1356 aa14.17□□□□□ -0.14
CSPG4P10-202ENST00000612093 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
CSPG4P10-202ENST00000612093 USP19O94966 1318 aa14.16□□□□□ -0.14
CSPG4P10-202ENST00000612093 NBPF6Q5VWK0 638 aa14.16□□□□□ -0.14
CSPG4P10-202ENST00000612093 NBPF4Q96M43 638 aa14.16□□□□□ -0.14
CSPG4P10-202ENST00000612093 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
CSPG4P10-202ENST00000612093 MBIPQ9NS73 344 aa14.16□□□□□ -0.14
CSPG4P10-202ENST00000612093 SMC4Q9NTJ3 1288 aa14.15□□□□□ -0.14
CSPG4P10-202ENST00000612093 AXIN2Q9Y2T1 843 aa14.15□□□□□ -0.14
CSPG4P10-202ENST00000612093 SLIT3O75094 1523 aa14.15□□□□□ -0.14
CSPG4P10-202ENST00000612093 CALD1Q05682 793 aaKnown RBP14.15□□□□□ -0.14
CSPG4P10-202ENST00000612093 ALS2Q96Q42 1657 aa14.14□□□□□ -0.15
CSPG4P10-202ENST00000612093 GNAI1P63096 354 aa14.14□□□□□ -0.15
CSPG4P10-202ENST00000612093 FTSJ3Q8IY81 847 aaKnown RBP14.14□□□□□ -0.15
CSPG4P10-202ENST00000612093 SSH1Q8WYL5 1049 aa14.14□□□□□ -0.15
CSPG4P10-202ENST00000612093 MED1Q15648 1581 aaPredicted RBP14.14□□□□□ -0.15
CSPG4P10-202ENST00000612093 APBB1O00213 710 aa14.14□□□□□ -0.15
CSPG4P10-202ENST00000612093 TSPYL6Q8N831 410 aa14.14□□□□□ -0.15
CSPG4P10-202ENST00000612093 IFT57Q9NWB7 429 aa14.14□□□□□ -0.15
CSPG4P10-202ENST00000612093 RLBP1P12271 317 aa14.13□□□□□ -0.15
CSPG4P10-202ENST00000612093 ZNF853P0CG23 659 aa14.13□□□□□ -0.15
CSPG4P10-202ENST00000612093 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
CSPG4P10-202ENST00000612093 RGPD2P0DJD1 1756 aa14.13□□□□□ -0.15
CSPG4P10-202ENST00000612093 PXDNQ92626 1479 aa14.13□□□□□ -0.15
CSPG4P10-202ENST00000612093 ANKRD24Q8TF21 1146 aa14.12□□□□□ -0.15
CSPG4P10-202ENST00000612093 MIS18AQ9NYP9 233 aa14.12□□□□□ -0.15
CSPG4P10-202ENST00000612093 TNS3Q68CZ2 1445 aa14.12□□□□□ -0.15
CSPG4P10-202ENST00000612093 CHRNA2Q15822 529 aa14.12□□□□□ -0.15
CSPG4P10-202ENST00000612093 SPATA31A3Q5VYP0 1347 aa14.12□□□□□ -0.15
CSPG4P10-202ENST00000612093 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
CSPG4P10-202ENST00000612093 UPF2Q9HAU5 1272 aaKnown RBP14.12□□□□□ -0.15
CSPG4P10-202ENST00000612093 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
CSPG4P10-202ENST00000612093 ARID3AQ99856 593 aa14.11□□□□□ -0.15
CSPG4P10-202ENST00000612093 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
CSPG4P10-202ENST00000612093 C8orf58Q8NAV2 365 aa14.11□□□□□ -0.15
CSPG4P10-202ENST00000612093 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
CSPG4P10-202ENST00000612093 CT47B1P0C2W7 299 aaPredicted RBP14.11□□□□□ -0.15
CSPG4P10-202ENST00000612093 HSP90AA1P07900 732 aaKnown RBP14.1□□□□□ -0.15
CSPG4P10-202ENST00000612093 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
CSPG4P10-202ENST00000612093 USP35Q9P2H5 1018 aa14.1□□□□□ -0.15
CSPG4P10-202ENST00000612093 PDE3AQ14432 1141 aa14.09□□□□□ -0.15
CSPG4P10-202ENST00000612093 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
CSPG4P10-202ENST00000612093 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P10-202ENST00000612093 VAMP4O75379 141 aa14.09□□□□□ -0.15
CSPG4P10-202ENST00000612093 PANK2Q9BZ23 570 aa14.09□□□□□ -0.15
CSPG4P10-202ENST00000612093 TWISTNBQ3B726 338 aaPredicted RBP14.08□□□□□ -0.16
CSPG4P10-202ENST00000612093 C1orf115Q9H7X2 142 aa14.08□□□□□ -0.16
CSPG4P10-202ENST00000612093 NOB1Q9ULX3 412 aaKnown RBP14.08□□□□□ -0.16
CSPG4P10-202ENST00000612093 PDZRN3Q9UPQ7 1066 aa14.08□□□□□ -0.16
CSPG4P10-202ENST00000612093 ZKSCAN2Q63HK3 967 aa14.08□□□□□ -0.16
CSPG4P10-202ENST00000612093 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.16
CSPG4P10-202ENST00000612093 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
CSPG4P10-202ENST00000612093 GNAT3A8MTJ3 354 aa14.08□□□□□ -0.16
CSPG4P10-202ENST00000612093 CRB1P82279 1406 aa14.07□□□□□ -0.16
CSPG4P10-202ENST00000612093 CHL1O00533 1208 aa14.07□□□□□ -0.16
CSPG4P10-202ENST00000612093 TRIM27P14373 513 aa14.07□□□□□ -0.16
CSPG4P10-202ENST00000612093 ERBB3P21860 1342 aa14.07□□□□□ -0.16
CSPG4P10-202ENST00000612093 KIAA0232Q92628 1395 aa14.07□□□□□ -0.16
CSPG4P10-202ENST00000612093 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
CSPG4P10-202ENST00000612093 BECN1Q14457 450 aa14.06□□□□□ -0.16
CSPG4P10-202ENST00000612093 MAP3K5Q99683 1374 aa14.06□□□□□ -0.16
CSPG4P10-202ENST00000612093 CSB-PGBD3P0DP91 1061 aa14.06□□□□□ -0.16
CSPG4P10-202ENST00000612093 HAP1P54257 671 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P10-202ENST00000612093 IL17REQ8NFR9 667 aa14.06□□□□□ -0.16
CSPG4P10-202ENST00000612093 TSPYL4Q9UJ04 414 aa14.06□□□□□ -0.16
CSPG4P10-202ENST00000612093 SOS2Q07890 1332 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P10-202ENST00000612093 DZIP1LQ8IYY4 767 aaKnown RBP14.05□□□□□ -0.16
CSPG4P10-202ENST00000612093 LNPKQ9C0E8 428 aa14.05□□□□□ -0.16
CSPG4P10-202ENST00000612093 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P10-202ENST00000612093 ATF7IPQ6VMQ6 1270 aa14.04□□□□□ -0.16
CSPG4P10-202ENST00000612093 ALDH1L2Q3SY69 923 aa14.04□□□□□ -0.16
CSPG4P10-202ENST00000612093 KIF16BQ96L93 1317 aa14.03□□□□□ -0.16
CSPG4P10-202ENST00000612093 FOXD4L5Q5VV16 416 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P10-202ENST00000612093 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P10-202ENST00000612093 LGR6Q9HBX8 967 aa14.03□□□□□ -0.16
CSPG4P10-202ENST00000612093 MRPL50Q8N5N7 158 aaKnown RBP14.03□□□□□ -0.16
CSPG4P10-202ENST00000612093 PRDM11Q9NQV5 511 aa14.03□□□□□ -0.16
CSPG4P10-202ENST00000612093 NCLP19338 710 aaKnown RBP14.02□□□□□ -0.17
CSPG4P10-202ENST00000612093 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
CSPG4P10-202ENST00000612093 CRYBG1Q9Y4K1 1723 aa14.02□□□□□ -0.17
CSPG4P10-202ENST00000612093 MVPQ14764 893 aaKnown RBP14.02□□□□□ -0.17
CSPG4P10-202ENST00000612093 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P10-202ENST00000612093 HTATSF1O43719 755 aaKnown RBP14.01□□□□□ -0.17
CSPG4P10-202ENST00000612093 TMEM57Q8N5G2 664 aa14.01□□□□□ -0.17
CSPG4P10-202ENST00000612093 TBC1D2Q9BYX2 928 aa14.01□□□□□ -0.17
CSPG4P10-202ENST00000612093 IPO8O15397 1037 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms