RNA–Protein interactions for RNA: ENST00000611875.4

NPRL3-211, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPRL3, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-211ENST00000611875 SSH1Q8WYL5 1049 aa20.54■□□□□ 0.88
NPRL3-211ENST00000611875 MCM10Q7L590 875 aa20.53■□□□□ 0.88
NPRL3-211ENST00000611875 TSPYL6Q8N831 410 aa20.53■□□□□ 0.88
NPRL3-211ENST00000611875 SMC4Q9NTJ3 1288 aa20.53■□□□□ 0.88
NPRL3-211ENST00000611875 NRKQ7Z2Y5 1582 aa20.53■□□□□ 0.88
NPRL3-211ENST00000611875 PDZRN3Q9UPQ7 1066 aa20.52■□□□□ 0.88
NPRL3-211ENST00000611875 CHD2O14647 1828 aaKnown RBP20.52■□□□□ 0.88
NPRL3-211ENST00000611875 ZNF142P52746 1687 aaPredicted RBP20.52■□□□□ 0.88
NPRL3-211ENST00000611875 EYA1Q99502 592 aa20.52■□□□□ 0.88
NPRL3-211ENST00000611875 C22orf23Q9BZE7 217 aa20.52■□□□□ 0.88
NPRL3-211ENST00000611875 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.87
NPRL3-211ENST00000611875 ANKARQ7Z5J8 1434 aa20.51■□□□□ 0.87
NPRL3-211ENST00000611875 NALCNQ8IZF0 1738 aa20.5■□□□□ 0.87
NPRL3-211ENST00000611875 OFD1O75665 1012 aa20.5■□□□□ 0.87
NPRL3-211ENST00000611875 KDM4FA0A1W2PPD8 638 aa20.5■□□□□ 0.87
NPRL3-211ENST00000611875 ADGRL3Q9HAR2 1447 aa20.49■□□□□ 0.87
NPRL3-211ENST00000611875 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
NPRL3-211ENST00000611875 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
NPRL3-211ENST00000611875 ZSCAN30Q86W11 494 aa20.49■□□□□ 0.87
NPRL3-211ENST00000611875 HSCBQ8IWL3 235 aa20.49■□□□□ 0.87
NPRL3-211ENST00000611875 MIS18AQ9NYP9 233 aa20.49■□□□□ 0.87
NPRL3-211ENST00000611875 PEAK1Q9H792 1746 aa20.49■□□□□ 0.87
NPRL3-211ENST00000611875 MBIPQ9NS73 344 aa20.49■□□□□ 0.87
NPRL3-211ENST00000611875 HOXC9P31274 260 aa20.48■□□□□ 0.87
NPRL3-211ENST00000611875 CCDC173Q0VFZ6 552 aa20.48■□□□□ 0.87
NPRL3-211ENST00000611875 KRT24Q2M2I5 525 aa20.48■□□□□ 0.87
NPRL3-211ENST00000611875 PCDHB15Q9Y5E8 787 aa20.48■□□□□ 0.87
NPRL3-211ENST00000611875 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.48■□□□□ 0.87
NPRL3-211ENST00000611875 MAP7D2Q96T17 732 aa20.48■□□□□ 0.87
NPRL3-211ENST00000611875 NOB1Q9ULX3 412 aaKnown RBP20.48■□□□□ 0.87
NPRL3-211ENST00000611875 TERF1P54274 439 aa20.47■□□□□ 0.87
NPRL3-211ENST00000611875 MFAP1P55081 439 aaKnown RBP20.47■□□□□ 0.87
NPRL3-211ENST00000611875 FLT4P35916 1363 aa20.46■□□□□ 0.87
NPRL3-211ENST00000611875 IL16Q14005 1332 aa20.46■□□□□ 0.87
NPRL3-211ENST00000611875 AAMPQ13685 434 aa20.46■□□□□ 0.87
NPRL3-211ENST00000611875 MTHFSDQ2M296 383 aaKnown RBP20.46■□□□□ 0.87
NPRL3-211ENST00000611875 PIK3C2AO00443 1686 aa20.46■□□□□ 0.87
NPRL3-211ENST00000611875 C8orf58Q8NAV2 365 aa20.46■□□□□ 0.87
NPRL3-211ENST00000611875 SBNO1A3KN83 1393 aa20.45■□□□□ 0.86
NPRL3-211ENST00000611875 FMN2Q9NZ56 1722 aa20.45■□□□□ 0.86
NPRL3-211ENST00000611875 PPP1R9BQ96SB3 815 aa20.45■□□□□ 0.86
NPRL3-211ENST00000611875 SKOR2Q2VWA4 1001 aaPredicted RBP20.45■□□□□ 0.86
NPRL3-211ENST00000611875 C19orf44Q9H6X5 657 aa20.45■□□□□ 0.86
NPRL3-211ENST00000611875 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
NPRL3-211ENST00000611875 GBP4Q96PP9 640 aa20.44■□□□□ 0.86
NPRL3-211ENST00000611875 TRIM27P14373 513 aa20.44■□□□□ 0.86
NPRL3-211ENST00000611875 MSNP26038 577 aaKnown RBP20.44■□□□□ 0.86
NPRL3-211ENST00000611875 FAM13BQ9NYF5 915 aa20.44■□□□□ 0.86
NPRL3-211ENST00000611875 DDIT3P35638 169 aa20.44■□□□□ 0.86
NPRL3-211ENST00000611875 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
NPRL3-211ENST00000611875 NCOA3Q9Y6Q9 1424 aa20.43■□□□□ 0.86
NPRL3-211ENST00000611875 ZKSCAN2Q63HK3 967 aa20.43■□□□□ 0.86
NPRL3-211ENST00000611875 FTSJ3Q8IY81 847 aaKnown RBP20.43■□□□□ 0.86
NPRL3-211ENST00000611875 RWDD1Q9H446 243 aaPredicted RBP20.43■□□□□ 0.86
NPRL3-211ENST00000611875 A0A0U1RQG5 324 aaPredicted RBP20.42■□□□□ 0.86
NPRL3-211ENST00000611875 KRT28Q7Z3Y7 464 aa20.42■□□□□ 0.86
NPRL3-211ENST00000611875 ANP32BQ92688 251 aaKnown RBP20.42■□□□□ 0.86
NPRL3-211ENST00000611875 VAMP4O75379 141 aa20.42■□□□□ 0.86
NPRL3-211ENST00000611875 NASPP49321 788 aaPredicted RBP20.42■□□□□ 0.86
NPRL3-211ENST00000611875 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
NPRL3-211ENST00000611875 GNAI1P63096 354 aa20.41■□□□□ 0.86
NPRL3-211ENST00000611875 LRRC59Q96AG4 307 aaKnown RBP20.41■□□□□ 0.86
NPRL3-211ENST00000611875 ATF3P18847 181 aa20.41■□□□□ 0.86
NPRL3-211ENST00000611875 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
NPRL3-211ENST00000611875 IFT57Q9NWB7 429 aa20.41■□□□□ 0.86
NPRL3-211ENST00000611875 DZIP1LQ8IYY4 767 aaKnown RBP20.4■□□□□ 0.86
NPRL3-211ENST00000611875 PTMSP20962 102 aa20.4■□□□□ 0.86
NPRL3-211ENST00000611875 GCP02774 474 aa20.4■□□□□ 0.86
NPRL3-211ENST00000611875 CIZ1Q9ULV3 898 aaPredicted RBP20.39■□□□□ 0.85
NPRL3-211ENST00000611875 R3HCC1Q9Y3T6 440 aaKnown RBP20.39■□□□□ 0.85
NPRL3-211ENST00000611875 ZC3H6P61129 1189 aaKnown RBP20.38■□□□□ 0.85
NPRL3-211ENST00000611875 TWISTNBQ3B726 338 aaPredicted RBP20.38■□□□□ 0.85
NPRL3-211ENST00000611875 NBPF6Q5VWK0 638 aa20.38■□□□□ 0.85
NPRL3-211ENST00000611875 ITPRIPQ8IWB1 547 aa20.38■□□□□ 0.85
NPRL3-211ENST00000611875 CABLES1Q8TDN4 633 aa20.38■□□□□ 0.85
NPRL3-211ENST00000611875 NBPF4Q96M43 638 aa20.38■□□□□ 0.85
NPRL3-211ENST00000611875 ATF7IPQ6VMQ6 1270 aa20.38■□□□□ 0.85
NPRL3-211ENST00000611875 IGSF1Q8N6C5 1336 aa20.38■□□□□ 0.85
NPRL3-211ENST00000611875 LMOD3Q0VAK6 560 aa20.37■□□□□ 0.85
NPRL3-211ENST00000611875 TMEM57Q8N5G2 664 aa20.37■□□□□ 0.85
NPRL3-211ENST00000611875 RAB3GAP1Q15042 981 aa20.36■□□□□ 0.85
NPRL3-211ENST00000611875 SMC5Q8IY18 1101 aa20.36■□□□□ 0.85
NPRL3-211ENST00000611875 SMAP1Q8IYB5 467 aaPredicted RBP20.36■□□□□ 0.85
NPRL3-211ENST00000611875 CT47B1P0C2W7 299 aaPredicted RBP20.36■□□□□ 0.85
NPRL3-211ENST00000611875 MVPQ14764 893 aaKnown RBP20.36■□□□□ 0.85
NPRL3-211ENST00000611875 AXIN2Q9Y2T1 843 aa20.36■□□□□ 0.85
NPRL3-211ENST00000611875 IP6K1Q92551 441 aa20.35■□□□□ 0.85
NPRL3-211ENST00000611875 C1orf167Q5SNV9 1468 aa20.35■□□□□ 0.85
NPRL3-211ENST00000611875 RTF1Q92541 710 aaKnown RBP20.34■□□□□ 0.85
NPRL3-211ENST00000611875 SNX21Q969T3 373 aa20.34■□□□□ 0.85
NPRL3-211ENST00000611875 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
NPRL3-211ENST00000611875 HSP90AB1P08238 724 aaKnown RBP20.33■□□□□ 0.85
NPRL3-211ENST00000611875 UQCRHLA0A096LP55 91 aa20.32■□□□□ 0.84
NPRL3-211ENST00000611875 UQCRHP07919 91 aa20.32■□□□□ 0.84
NPRL3-211ENST00000611875 MTERF4Q7Z6M4 381 aaKnown RBP20.32■□□□□ 0.84
NPRL3-211ENST00000611875 MRPL50Q8N5N7 158 aaKnown RBP20.32■□□□□ 0.84
NPRL3-211ENST00000611875 ZNF335Q9H4Z2 1342 aaPredicted RBP20.32■□□□□ 0.84
NPRL3-211ENST00000611875 CHL1O00533 1208 aa20.32■□□□□ 0.84
NPRL3-211ENST00000611875 DLG5Q8TDM6 1919 aa20.31■□□□□ 0.84
NPRL3-211ENST00000611875 KDRP35968 1356 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms