RNA–Protein interactions for RNA: ENST00000610966.4

SVOP-205, Transcript of SV2 related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVOP, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-205ENST00000610966 NUP133Q8WUM0 1156 aa11.27□□□□□ -0.61
SVOP-205ENST00000610966 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.61
SVOP-205ENST00000610966 CCDC192P0DO97 292 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
SVOP-205ENST00000610966 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
SVOP-205ENST00000610966 KRT32Q14532 448 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 SMARCE1Q969G3 411 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 ZSCAN31Q96LW9 406 aaPredicted RBP11.26□□□□□ -0.61
SVOP-205ENST00000610966 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 ABCC11Q96J66 1382 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 KRT18P05783 430 aaKnown RBP11.26□□□□□ -0.61
SVOP-205ENST00000610966 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
SVOP-205ENST00000610966 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 ADGRF5Q8IZF2 1346 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 STARD3NLO95772 234 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 ALDH1L2Q3SY69 923 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 AK7Q96M32 723 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 CCDC173Q0VFZ6 552 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
SVOP-205ENST00000610966 TDO2P48775 406 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 CAGE1Q8TC20 777 aa11.26□□□□□ -0.61
SVOP-205ENST00000610966 TAF7Q15545 349 aaPredicted RBP11.25□□□□□ -0.61
SVOP-205ENST00000610966 ZFYVE27Q5T4F4 411 aa11.25□□□□□ -0.61
SVOP-205ENST00000610966 CDR1P51861 262 aa11.25□□□□□ -0.61
SVOP-205ENST00000610966 HSP90B2PQ58FF3 399 aa11.25□□□□□ -0.61
SVOP-205ENST00000610966 GRIN2AQ12879 1464 aa11.25□□□□□ -0.61
SVOP-205ENST00000610966 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
SVOP-205ENST00000610966 CDKL5O76039 1030 aa11.25□□□□□ -0.61
SVOP-205ENST00000610966 PTCD1O75127 700 aaKnown RBP11.24□□□□□ -0.61
SVOP-205ENST00000610966 SPC24Q8NBT2 197 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
SVOP-205ENST00000610966 EMILIN1Q9Y6C2 1016 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 IDI1Q13907 227 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 NCOA1Q15788 1441 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 LARP1Q6PKG0 1096 aaKnown RBP11.24□□□□□ -0.61
SVOP-205ENST00000610966 RAI14Q9P0K7 980 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 LRP2BPQ9P2M1 347 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 SERPINC1P01008 464 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
SVOP-205ENST00000610966 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 MAP3K1Q13233 1512 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 WASLO00401 505 aaPredicted RBP11.24□□□□□ -0.61
SVOP-205ENST00000610966 IDH1O75874 414 aaKnown RBP11.24□□□□□ -0.61
SVOP-205ENST00000610966 CCP110O43303 1012 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 RAB11FIP3O75154 756 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 AMOTQ4VCS5 1084 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
SVOP-205ENST00000610966 MX1P20591 662 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 FBXO31Q5XUX0 539 aaPredicted RBP11.23□□□□□ -0.61
SVOP-205ENST00000610966 USHBP1Q8N6Y0 703 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 PPP1R1BQ9UD71 204 aaPredicted RBP11.23□□□□□ -0.61
SVOP-205ENST00000610966 GLRX3O76003 335 aaKnown RBP11.23□□□□□ -0.61
SVOP-205ENST00000610966 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 NKTRP30414 1462 aaKnown RBP11.23□□□□□ -0.61
SVOP-205ENST00000610966 FAM135AQ9P2D6 1515 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 PIP4K2BP78356 416 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 SPATA32Q96LK8 384 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 NOL7Q9UMY1 257 aaKnown RBP11.23□□□□□ -0.61
SVOP-205ENST00000610966 AMOTL2Q9Y2J4 779 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 SF3B2Q13435 895 aaKnown RBP11.23□□□□□ -0.61
SVOP-205ENST00000610966 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
SVOP-205ENST00000610966 CFAP45Q9UL16 551 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 DACH1Q9UI36 760 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 PHF8Q9UPP1 1060 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 RBM5P52756 815 aaKnown RBP eCLIP11.23□□□□□ -0.61
SVOP-205ENST00000610966 METTL24Q5JXM2 366 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
SVOP-205ENST00000610966 SMARCA5O60264 1052 aaPredicted RBP11.22□□□□□ -0.61
SVOP-205ENST00000610966 HSP90AB2PQ58FF8 381 aa11.22□□□□□ -0.61
SVOP-205ENST00000610966 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
SVOP-205ENST00000610966 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
SVOP-205ENST00000610966 STIM1Q13586 685 aa11.22□□□□□ -0.61
SVOP-205ENST00000610966 IMMTQ16891 758 aaKnown RBP11.22□□□□□ -0.61
SVOP-205ENST00000610966 TMEM132AQ24JP5 1023 aa11.22□□□□□ -0.61
SVOP-205ENST00000610966 TMOD3Q9NYL9 352 aa11.22□□□□□ -0.61
SVOP-205ENST00000610966 AIDAQ96BJ3 306 aa11.22□□□□□ -0.61
SVOP-205ENST00000610966 MYD88Q99836 296 aa11.22□□□□□ -0.61
SVOP-205ENST00000610966 MCM4P33991 863 aa11.21□□□□□ -0.61
SVOP-205ENST00000610966 AKAP2Q9Y2D5 859 aa11.21□□□□□ -0.61
SVOP-205ENST00000610966 FOXO3O43524 673 aa11.21□□□□□ -0.61
SVOP-205ENST00000610966 ZNHIT6Q9NWK9 470 aaKnown RBP11.21□□□□□ -0.61
SVOP-205ENST00000610966 ABCF2Q9UG63 623 aa11.21□□□□□ -0.61
SVOP-205ENST00000610966 BRPF3Q9ULD4 1205 aa11.21□□□□□ -0.62
SVOP-205ENST00000610966 F6X3S4 739 aa11.21□□□□□ -0.62
SVOP-205ENST00000610966 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.62
SVOP-205ENST00000610966 ZHX3Q9H4I2 956 aa11.21□□□□□ -0.62
SVOP-205ENST00000610966 GRPEL1Q9HAV7 217 aa11.21□□□□□ -0.62
SVOP-205ENST00000610966 SCAF11Q99590 1463 aaKnown RBP11.2□□□□□ -0.62
SVOP-205ENST00000610966 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
SVOP-205ENST00000610966 DHX8Q14562 1220 aaKnown RBP11.2□□□□□ -0.62
SVOP-205ENST00000610966 PPFIBP1Q86W92 1011 aa11.2□□□□□ -0.62
SVOP-205ENST00000610966 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
SVOP-205ENST00000610966 SYCP1Q15431 976 aa11.2□□□□□ -0.62
SVOP-205ENST00000610966 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
SVOP-205ENST00000610966 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
SVOP-205ENST00000610966 BOLA2Q9H3K6 86 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms