RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 MCM10Q7L590 875 aa22.2■■□□□ 1.14
TNIP1-221ENST00000610874 ORAI2Q96SN7 254 aa22.2■■□□□ 1.14
TNIP1-221ENST00000610874 ZNF142P52746 1687 aaPredicted RBP22.2■■□□□ 1.14
TNIP1-221ENST00000610874 NALCNQ8IZF0 1738 aa22.2■■□□□ 1.14
TNIP1-221ENST00000610874 FOXO3O43524 673 aa22.19■■□□□ 1.14
TNIP1-221ENST00000610874 PSME1Q06323 249 aa22.19■■□□□ 1.14
TNIP1-221ENST00000610874 ANKARQ7Z5J8 1434 aa22.19■■□□□ 1.14
TNIP1-221ENST00000610874 PIK3C2AO00443 1686 aa22.18■■□□□ 1.14
TNIP1-221ENST00000610874 KIF16BQ96L93 1317 aa22.18■■□□□ 1.14
TNIP1-221ENST00000610874 IPO8O15397 1037 aaKnown RBP22.17■■□□□ 1.14
TNIP1-221ENST00000610874 FMN2Q9NZ56 1722 aa22.17■■□□□ 1.14
TNIP1-221ENST00000610874 NUCB1Q02818 461 aa22.16■■□□□ 1.14
TNIP1-221ENST00000610874 LMOD2Q6P5Q4 547 aa22.16■■□□□ 1.14
TNIP1-221ENST00000610874 PROSER2Q86WR7 435 aaPredicted RBP22.16■■□□□ 1.14
TNIP1-221ENST00000610874 EYA1Q99502 592 aa22.16■■□□□ 1.14
TNIP1-221ENST00000610874 GNAI1P63096 354 aa22.15■■□□□ 1.14
TNIP1-221ENST00000610874 FLT4P35916 1363 aa22.15■■□□□ 1.14
TNIP1-221ENST00000610874 DLG5Q8TDM6 1919 aa22.15■■□□□ 1.14
TNIP1-221ENST00000610874 HSPA2P54652 639 aa22.15■■□□□ 1.14
TNIP1-221ENST00000610874 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
TNIP1-221ENST00000610874 C8orf58Q8NAV2 365 aa22.15■■□□□ 1.14
TNIP1-221ENST00000610874 CHD1LQ86WJ1 897 aa22.14■■□□□ 1.14
TNIP1-221ENST00000610874 SBNO1A3KN83 1393 aa22.14■■□□□ 1.13
TNIP1-221ENST00000610874 DDX11L8A8MPP1 907 aa22.14■■□□□ 1.13
TNIP1-221ENST00000610874 IFT57Q9NWB7 429 aa22.14■■□□□ 1.13
TNIP1-221ENST00000610874 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.13
TNIP1-221ENST00000610874 VAMP4O75379 141 aa22.13■■□□□ 1.13
TNIP1-221ENST00000610874 RBM25P49756 843 aaKnown RBP22.13■■□□□ 1.13
TNIP1-221ENST00000610874 USHBP1Q8N6Y0 703 aa22.13■■□□□ 1.13
TNIP1-221ENST00000610874 HSP90AB1P08238 724 aaKnown RBP22.12■■□□□ 1.13
TNIP1-221ENST00000610874 ZNF853P0CG23 659 aa22.12■■□□□ 1.13
TNIP1-221ENST00000610874 HOXC9P31274 260 aa22.12■■□□□ 1.13
TNIP1-221ENST00000610874 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
TNIP1-221ENST00000610874 CFAP44Q96MT7 982 aa22.12■■□□□ 1.13
TNIP1-221ENST00000610874 ADGRL3Q9HAR2 1447 aa22.12■■□□□ 1.13
TNIP1-221ENST00000610874 CALD1Q05682 793 aaKnown RBP22.12■■□□□ 1.13
TNIP1-221ENST00000610874 MTHFSDQ2M296 383 aaKnown RBP22.12■■□□□ 1.13
TNIP1-221ENST00000610874 C1orf115Q9H7X2 142 aa22.12■■□□□ 1.13
TNIP1-221ENST00000610874 ANKRD45Q5TZF3 282 aa22.11■■□□□ 1.13
TNIP1-221ENST00000610874 MRE11P49959 708 aa22.1■■□□□ 1.13
TNIP1-221ENST00000610874 TWISTNBQ3B726 338 aaPredicted RBP22.1■■□□□ 1.13
TNIP1-221ENST00000610874 FOXD4L1Q9NU39 408 aa22.1■■□□□ 1.13
TNIP1-221ENST00000610874 ALDH1L2Q3SY69 923 aa22.09■■□□□ 1.13
TNIP1-221ENST00000610874 TNPO1Q92973 898 aaKnown RBP22.09■■□□□ 1.13
TNIP1-221ENST00000610874 NCOA3Q9Y6Q9 1424 aa22.09■■□□□ 1.13
TNIP1-221ENST00000610874 SNX21Q969T3 373 aa22.09■■□□□ 1.13
TNIP1-221ENST00000610874 HSP90AA1P07900 732 aaKnown RBP22.08■■□□□ 1.13
TNIP1-221ENST00000610874 DDIT3P35638 169 aa22.08■■□□□ 1.13
TNIP1-221ENST00000610874 GRPEL1Q9HAV7 217 aa22.08■■□□□ 1.13
TNIP1-221ENST00000610874 BMP2KLQ5H9B9 411 aa22.07■■□□□ 1.12
TNIP1-221ENST00000610874 DDX17Q92841 729 aaKnown RBP22.07■■□□□ 1.12
TNIP1-221ENST00000610874 NAP1L5Q96NT1 182 aaPredicted RBP22.05■■□□□ 1.12
TNIP1-221ENST00000610874 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
TNIP1-221ENST00000610874 ARHGEF10O15013 1369 aa22.05■■□□□ 1.12
TNIP1-221ENST00000610874 CD2BP2O95400 341 aaKnown RBP22.05■■□□□ 1.12
TNIP1-221ENST00000610874 MRPL50Q8N5N7 158 aaKnown RBP22.05■■□□□ 1.12
TNIP1-221ENST00000610874 ZBTB7BO15156 539 aaPredicted RBP22.04■■□□□ 1.12
TNIP1-221ENST00000610874 KIF2CQ99661 725 aa22.04■■□□□ 1.12
TNIP1-221ENST00000610874 RGPD1P0DJD0 1748 aa22.03■■□□□ 1.12
TNIP1-221ENST00000610874 MARF1Q9Y4F3 1742 aaKnown RBP22.03■■□□□ 1.12
TNIP1-221ENST00000610874 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
TNIP1-221ENST00000610874 GBP4Q96PP9 640 aa22.03■■□□□ 1.12
TNIP1-221ENST00000610874 CLCN1P35523 988 aa22.02■■□□□ 1.12
TNIP1-221ENST00000610874 TBC1D9Q6ZT07 1266 aa22.02■■□□□ 1.12
TNIP1-221ENST00000610874 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
TNIP1-221ENST00000610874 UBE2Q2Q8WVN8 375 aa22.02■■□□□ 1.12
TNIP1-221ENST00000610874 GCC1Q96CN9 775 aa22.02■■□□□ 1.12
TNIP1-221ENST00000610874 RAB3GAP1Q15042 981 aa22.01■■□□□ 1.11
TNIP1-221ENST00000610874 CIZ1Q9ULV3 898 aaPredicted RBP22.01■■□□□ 1.11
TNIP1-221ENST00000610874 CHL1O00533 1208 aa22■■□□□ 1.11
TNIP1-221ENST00000610874 LRRC59Q96AG4 307 aaKnown RBP22■■□□□ 1.11
TNIP1-221ENST00000610874 C19orf44Q9H6X5 657 aa22■■□□□ 1.11
TNIP1-221ENST00000610874 KDRP35968 1356 aa22■■□□□ 1.11
TNIP1-221ENST00000610874 GAS2L3Q86XJ1 694 aa21.99■■□□□ 1.11
TNIP1-221ENST00000610874 NBPF6Q5VWK0 638 aa21.99■■□□□ 1.11
TNIP1-221ENST00000610874 KRT28Q7Z3Y7 464 aa21.99■■□□□ 1.11
TNIP1-221ENST00000610874 NBPF4Q96M43 638 aa21.99■■□□□ 1.11
TNIP1-221ENST00000610874 K7ELQ4 463 aaPredicted RBP21.98■■□□□ 1.11
TNIP1-221ENST00000610874 GCP02774 474 aa21.98■■□□□ 1.11
TNIP1-221ENST00000610874 SIRT2Q8IXJ6 389 aa21.98■■□□□ 1.11
TNIP1-221ENST00000610874 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
TNIP1-221ENST00000610874 TMEM94Q12767 1356 aa21.97■■□□□ 1.11
TNIP1-221ENST00000610874 TSPYL4Q9UJ04 414 aa21.97■■□□□ 1.11
TNIP1-221ENST00000610874 IP6K1Q92551 441 aa21.97■■□□□ 1.11
TNIP1-221ENST00000610874 BRPF1P55201 1214 aaPredicted RBP21.96■■□□□ 1.11
TNIP1-221ENST00000610874 CHMP4BQ9H444 224 aaKnown RBP21.96■■□□□ 1.11
TNIP1-221ENST00000610874 ISY1Q9ULR0 285 aaKnown RBP21.96■■□□□ 1.11
TNIP1-221ENST00000610874 ATF3P18847 181 aa21.96■■□□□ 1.11
TNIP1-221ENST00000610874 GAS2L2Q8NHY3 880 aa21.96■■□□□ 1.11
TNIP1-221ENST00000610874 CRB1P82279 1406 aa21.95■■□□□ 1.1
TNIP1-221ENST00000610874 SSFA2P28290 1259 aa21.94■■□□□ 1.1
TNIP1-221ENST00000610874 TRIM44Q96DX7 344 aaPredicted RBP21.94■■□□□ 1.1
TNIP1-221ENST00000610874 ESPNB1AK53 854 aa21.94■■□□□ 1.1
TNIP1-221ENST00000610874 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
TNIP1-221ENST00000610874 ARHGAP45Q92619 1136 aa21.94■■□□□ 1.1
TNIP1-221ENST00000610874 ERBB4Q15303 1308 aa21.94■■□□□ 1.1
TNIP1-221ENST00000610874 SKOR2Q2VWA4 1001 aaPredicted RBP21.93■■□□□ 1.1
TNIP1-221ENST00000610874 KCNH5Q8NCM2 988 aa21.93■■□□□ 1.1
TNIP1-221ENST00000610874 NECTIN2Q92692 538 aa21.93■■□□□ 1.1
TNIP1-221ENST00000610874 C1orf167Q5SNV9 1468 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms