RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 CKAP2LQ8IYA6 745 aa11.56□□□□□ -0.56
TPM1-233ENST00000610733 TFIP11Q9UBB9 837 aaKnown RBP11.56□□□□□ -0.56
TPM1-233ENST00000610733 CSB-PGBD3P0DP91 1061 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 CBX1P83916 185 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 GIMAP6Q6P9H5 292 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 PLCH2O75038 1416 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 H3BQV1 296 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 CASTP20810 708 aaKnown RBP11.55□□□□□ -0.56
TPM1-233ENST00000610733 IFFO2Q5TF58 517 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 SIRT2Q8IXJ6 389 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 NECAB1Q8N987 351 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 FAM173BQ6P4H8 233 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 DDX11Q96FC9 970 aa11.55□□□□□ -0.56
TPM1-233ENST00000610733 JAKMIP1Q96N16 626 aaKnown RBP11.55□□□□□ -0.56
TPM1-233ENST00000610733 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
TPM1-233ENST00000610733 PHF14O94880 888 aa11.54□□□□□ -0.56
TPM1-233ENST00000610733 CEBPAP49715 358 aaPredicted RBP11.54□□□□□ -0.56
TPM1-233ENST00000610733 ABTB2Q8N961 1025 aa11.54□□□□□ -0.56
TPM1-233ENST00000610733 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
TPM1-233ENST00000610733 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
TPM1-233ENST00000610733 CNPY2Q9Y2B0 182 aa11.54□□□□□ -0.56
TPM1-233ENST00000610733 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
TPM1-233ENST00000610733 CCDC39Q9UFE4 941 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 NSFL1CQ9UNZ2 370 aaKnown RBP11.53□□□□□ -0.56
TPM1-233ENST00000610733 ERVK-7P63135 1459 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 MYL6BP14649 208 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 PIP4K2AP48426 406 aaPredicted RBP11.53□□□□□ -0.56
TPM1-233ENST00000610733 RPAP2Q8IXW5 612 aaPredicted RBP11.53□□□□□ -0.56
TPM1-233ENST00000610733 SHANK2Q9UPX8 1470 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 NUP160Q12769 1436 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 RBM25P49756 843 aaKnown RBP11.53□□□□□ -0.56
TPM1-233ENST00000610733 PDE1AP54750 535 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 CEP85Q6P2H3 762 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
TPM1-233ENST00000610733 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 DUOX2Q9NRD8 1548 aa11.53□□□□□ -0.56
TPM1-233ENST00000610733 GADD45BO75293 160 aaPredicted RBP11.52□□□□□ -0.56
TPM1-233ENST00000610733 ZKSCAN1P17029 563 aaPredicted RBP11.52□□□□□ -0.56
TPM1-233ENST00000610733 TRIM5Q9C035 493 aa11.52□□□□□ -0.56
TPM1-233ENST00000610733 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.57
TPM1-233ENST00000610733 CCDC8Q9H0W5 538 aaPredicted RBP11.52□□□□□ -0.57
TPM1-233ENST00000610733 PALD1Q9ULE6 856 aa11.52□□□□□ -0.57
TPM1-233ENST00000610733 TPM2P07951 284 aa11.52□□□□□ -0.57
TPM1-233ENST00000610733 FAM184AQ8NB25 1140 aa11.52□□□□□ -0.57
TPM1-233ENST00000610733 CCDC85AQ96PX6 553 aaPredicted RBP11.52□□□□□ -0.57
TPM1-233ENST00000610733 FSD1Q9BTV5 496 aa11.52□□□□□ -0.57
TPM1-233ENST00000610733 TMEM63CQ9P1W3 806 aa11.52□□□□□ -0.57
TPM1-233ENST00000610733 SAMD9LQ8IVG5 1584 aa11.52□□□□□ -0.57
TPM1-233ENST00000610733 MBD3O95983 291 aa11.52□□□□□ -0.57
TPM1-233ENST00000610733 NEUROD6Q96NK8 337 aa11.52□□□□□ -0.57
TPM1-233ENST00000610733 ABCC11Q96J66 1382 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 GNAI3P08754 354 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 FLIIQ13045 1269 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 SNX21Q969T3 373 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 EIF4A2Q14240 407 aaKnown RBP11.51□□□□□ -0.57
TPM1-233ENST00000610733 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 PLEKHF1Q96S99 279 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 FSD2A1L4K1 749 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 BECN2A8MW95 431 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 GUCY1B3Q02153 619 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 AEBP2Q6ZN18 517 aaPredicted RBP11.51□□□□□ -0.57
TPM1-233ENST00000610733 USP48Q86UV5 1035 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 CLASRPQ8N2M8 674 aaKnown RBP11.51□□□□□ -0.57
TPM1-233ENST00000610733 BOLA2Q9H3K6 86 aa11.51□□□□□ -0.57
TPM1-233ENST00000610733 CWC22Q9HCG8 908 aaKnown RBP11.51□□□□□ -0.57
TPM1-233ENST00000610733 PNMA6EA0A0J9YXQ4 647 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
TPM1-233ENST00000610733 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
TPM1-233ENST00000610733 ANKRD44Q8N8A2 993 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 ATP10AO60312 1499 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 WASLO00401 505 aaPredicted RBP11.5□□□□□ -0.57
TPM1-233ENST00000610733 LRRC2Q9BYS8 371 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 DCTPP1Q9H773 170 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 PA2G4Q9UQ80 394 aaKnown RBP11.5□□□□□ -0.57
TPM1-233ENST00000610733 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
TPM1-233ENST00000610733 GORABQ5T7V8 394 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 LARP1BQ659C4 914 aaKnown RBP11.5□□□□□ -0.57
TPM1-233ENST00000610733 MPRIPQ6WCQ1 1025 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 FILIP1Q7Z7B0 1213 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 AACSQ86V21 672 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 GPATCH3Q96I76 525 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 PHAXQ9H814 394 aaKnown RBP11.5□□□□□ -0.57
TPM1-233ENST00000610733 MSH6P52701 1360 aa11.5□□□□□ -0.57
TPM1-233ENST00000610733 ADCY5O95622 1261 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 GNL2Q13823 731 aaKnown RBP11.49□□□□□ -0.57
TPM1-233ENST00000610733 ADGBQ8N7X0 1667 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 GOLGA6L19H0YKK7 550 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 PPP1R42Q7Z4L9 355 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 RAB11FIP4Q86YS3 637 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 SRCIN1Q9C0H9 1055 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 G3BP1Q13283 466 aaKnown RBP eCLIP11.49□□□□□ -0.57
TPM1-233ENST00000610733 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 CCAR2Q8N163 923 aaKnown RBP11.49□□□□□ -0.57
TPM1-233ENST00000610733 LMBRD1Q9NUN5 540 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
TPM1-233ENST00000610733 CCT4P50991 539 aaKnown RBP11.48□□□□□ -0.57
TPM1-233ENST00000610733 GPT2Q8TD30 523 aa11.48□□□□□ -0.57
TPM1-233ENST00000610733 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms