RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 EYA1Q99502 592 aa17.43■□□□□ 0.38
CD9-212ENST00000610354 NPC1L1Q9UHC9 1359 aa17.42■□□□□ 0.38
CD9-212ENST00000610354 BAG6P46379 1132 aa17.42■□□□□ 0.38
CD9-212ENST00000610354 CAMKK2Q96RR4 588 aa17.42■□□□□ 0.38
CD9-212ENST00000610354 APBA3O96018 575 aa17.41■□□□□ 0.38
CD9-212ENST00000610354 EZH2Q15910 746 aaKnown RBP17.41■□□□□ 0.38
CD9-212ENST00000610354 KAT6BQ8WYB5 2073 aa17.4■□□□□ 0.38
CD9-212ENST00000610354 KCNQ2O43526 872 aa17.39■□□□□ 0.37
CD9-212ENST00000610354 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
CD9-212ENST00000610354 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
CD9-212ENST00000610354 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
CD9-212ENST00000610354 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
CD9-212ENST00000610354 NHSQ6T4R5 1651 aa17.37■□□□□ 0.37
CD9-212ENST00000610354 TATP17735 454 aaPredicted RBP17.37■□□□□ 0.37
CD9-212ENST00000610354 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
CD9-212ENST00000610354 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
CD9-212ENST00000610354 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
CD9-212ENST00000610354 RREB1Q92766 1687 aa17.37■□□□□ 0.37
CD9-212ENST00000610354 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
CD9-212ENST00000610354 MTHFSP49914 203 aa17.36■□□□□ 0.37
CD9-212ENST00000610354 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
CD9-212ENST00000610354 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
CD9-212ENST00000610354 IL13P35225 146 aa17.34■□□□□ 0.37
CD9-212ENST00000610354 BTAF1O14981 1849 aa17.34■□□□□ 0.37
CD9-212ENST00000610354 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.37
CD9-212ENST00000610354 PLSCR1O15162 318 aa17.33■□□□□ 0.36
CD9-212ENST00000610354 CYP27B1O15528 508 aa17.33■□□□□ 0.36
CD9-212ENST00000610354 PROM2Q8N271 834 aa17.33■□□□□ 0.36
CD9-212ENST00000610354 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.36
CD9-212ENST00000610354 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.36
CD9-212ENST00000610354 C1QBPQ07021 282 aaKnown RBP17.31■□□□□ 0.36
CD9-212ENST00000610354 AEBP1Q8IUX7 1158 aa17.31■□□□□ 0.36
CD9-212ENST00000610354 PARD3Q8TEW0 1356 aa17.31■□□□□ 0.36
CD9-212ENST00000610354 COL3A1P02461 1466 aaPredicted RBP17.31■□□□□ 0.36
CD9-212ENST00000610354 ZEB1P37275 1124 aaPredicted RBP17.3■□□□□ 0.36
CD9-212ENST00000610354 TOGARAM1Q9Y4F4 1720 aa17.3■□□□□ 0.36
CD9-212ENST00000610354 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
CD9-212ENST00000610354 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
CD9-212ENST00000610354 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
CD9-212ENST00000610354 PSDA5PKW4 1024 aaPredicted RBP17.27■□□□□ 0.36
CD9-212ENST00000610354 PPP2R1AP30153 589 aa17.27■□□□□ 0.36
CD9-212ENST00000610354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.36
CD9-212ENST00000610354 ITGB4P16144 1822 aa17.27■□□□□ 0.36
CD9-212ENST00000610354 KDRP35968 1356 aa17.27■□□□□ 0.35
CD9-212ENST00000610354 DDX10Q13206 875 aaKnown RBP17.26■□□□□ 0.35
CD9-212ENST00000610354 NKX1-1Q15270 411 aaPredicted RBP17.26■□□□□ 0.35
CD9-212ENST00000610354 TXNRD1Q16881 649 aa17.26■□□□□ 0.35
CD9-212ENST00000610354 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
CD9-212ENST00000610354 SPG7Q9UQ90 795 aa17.26■□□□□ 0.35
CD9-212ENST00000610354 DIAPH1O60610 1272 aaKnown RBP17.24■□□□□ 0.35
CD9-212ENST00000610354 PHKG2P15735 406 aa17.24■□□□□ 0.35
CD9-212ENST00000610354 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
CD9-212ENST00000610354 PLEKHG2Q9H7P9 1386 aa17.24■□□□□ 0.35
CD9-212ENST00000610354 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
CD9-212ENST00000610354 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
CD9-212ENST00000610354 HMOX1P09601 288 aa17.22■□□□□ 0.35
CD9-212ENST00000610354 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
CD9-212ENST00000610354 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
CD9-212ENST00000610354 LY75O60449 1722 aa17.22■□□□□ 0.35
CD9-212ENST00000610354 PLEKHO1Q53GL0 409 aaPredicted RBP17.21■□□□□ 0.35
CD9-212ENST00000610354 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
CD9-212ENST00000610354 LRRC4BQ9NT99 713 aa17.21■□□□□ 0.35
CD9-212ENST00000610354 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
CD9-212ENST00000610354 ZNF530Q6P9A1 599 aaPredicted RBP17.2■□□□□ 0.34
CD9-212ENST00000610354 KCNQ4P56696 695 aa17.19■□□□□ 0.34
CD9-212ENST00000610354 AMOTQ4VCS5 1084 aa17.19■□□□□ 0.34
CD9-212ENST00000610354 NBPF14Q5TI25 921 aa17.19■□□□□ 0.34
CD9-212ENST00000610354 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
CD9-212ENST00000610354 PIGBQ92521 554 aa17.19■□□□□ 0.34
CD9-212ENST00000610354 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
CD9-212ENST00000610354 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
CD9-212ENST00000610354 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
CD9-212ENST00000610354 PDGFDQ9GZP0 370 aaPredicted RBP17.16■□□□□ 0.34
CD9-212ENST00000610354 VIRMAQ69YN4 1812 aaKnown RBP17.16■□□□□ 0.34
CD9-212ENST00000610354 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
CD9-212ENST00000610354 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
CD9-212ENST00000610354 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
CD9-212ENST00000610354 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
CD9-212ENST00000610354 SLC15A2Q16348 729 aa17.14■□□□□ 0.33
CD9-212ENST00000610354 SLC27A3Q5K4L6 730 aa17.14■□□□□ 0.33
CD9-212ENST00000610354 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
CD9-212ENST00000610354 PALLDQ8WX93 1383 aa17.13■□□□□ 0.33
CD9-212ENST00000610354 TAF1LQ8IZX4 1826 aa17.13■□□□□ 0.33
CD9-212ENST00000610354 TUBGCP6Q96RT7 1819 aa17.13■□□□□ 0.33
CD9-212ENST00000610354 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
CD9-212ENST00000610354 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
CD9-212ENST00000610354 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
CD9-212ENST00000610354 STK32BQ9NY57 414 aa17.13■□□□□ 0.33
CD9-212ENST00000610354 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
CD9-212ENST00000610354 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
CD9-212ENST00000610354 RALBP1Q15311 655 aa17.12■□□□□ 0.33
CD9-212ENST00000610354 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
CD9-212ENST00000610354 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
CD9-212ENST00000610354 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
CD9-212ENST00000610354 LGR6Q9HBX8 967 aa17.12■□□□□ 0.33
CD9-212ENST00000610354 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
CD9-212ENST00000610354 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
CD9-212ENST00000610354 CCNL1Q9UK58 526 aaPredicted RBP17.12■□□□□ 0.33
CD9-212ENST00000610354 ADAMTS7Q9UKP4 1686 aa17.12■□□□□ 0.33
CD9-212ENST00000610354 LRP5O75197 1615 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms