RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 AGLP35573 1532 aa15.23■□□□□ 0.03
CTCFL-218ENST00000608440 KIAA1524Q8TCG1 905 aa15.22■□□□□ 0.03
CTCFL-218ENST00000608440 DISP3Q9P2K9 1392 aa15.22■□□□□ 0.03
CTCFL-218ENST00000608440 ARHGAP31Q2M1Z3 1444 aa15.22■□□□□ 0.03
CTCFL-218ENST00000608440 FOXD4L6Q3SYB3 417 aaPredicted RBP15.22■□□□□ 0.03
CTCFL-218ENST00000608440 FOXD4L3Q6VB84 417 aaPredicted RBP15.22■□□□□ 0.03
CTCFL-218ENST00000608440 TRPM1Q7Z4N2 1603 aa15.21■□□□□ 0.03
CTCFL-218ENST00000608440 GYS2P54840 703 aa15.21■□□□□ 0.03
CTCFL-218ENST00000608440 SPC24Q8NBT2 197 aa15.21■□□□□ 0.03
CTCFL-218ENST00000608440 MVPQ14764 893 aaKnown RBP15.21■□□□□ 0.02
CTCFL-218ENST00000608440 ZDHHC9Q9Y397 364 aa15.21■□□□□ 0.02
CTCFL-218ENST00000608440 KNSTRNQ9Y448 316 aa15.21■□□□□ 0.02
CTCFL-218ENST00000608440 TOMM22Q9NS69 142 aa15.2■□□□□ 0.02
CTCFL-218ENST00000608440 NOS1P29475 1434 aa15.2■□□□□ 0.02
CTCFL-218ENST00000608440 MROH2AA6NES4 1674 aa15.2■□□□□ 0.02
CTCFL-218ENST00000608440 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
CTCFL-218ENST00000608440 PATL2C9JE40 543 aaKnown RBP15.2■□□□□ 0.02
CTCFL-218ENST00000608440 SIRT1Q96EB6 747 aa15.2■□□□□ 0.02
CTCFL-218ENST00000608440 KCNF1Q9H3M0 494 aa15.2■□□□□ 0.02
CTCFL-218ENST00000608440 RRP7AQ9Y3A4 280 aaKnown RBP15.2■□□□□ 0.02
CTCFL-218ENST00000608440 SYNMO15061 1565 aa15.2■□□□□ 0.02
CTCFL-218ENST00000608440 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
CTCFL-218ENST00000608440 C16orf45Q96MC5 204 aaPredicted RBP15.19■□□□□ 0.02
CTCFL-218ENST00000608440 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.19■□□□□ 0.02
CTCFL-218ENST00000608440 V9GYY5 206 aaPredicted RBP15.19■□□□□ 0.02
CTCFL-218ENST00000608440 NOP2P46087 812 aaKnown RBP15.19■□□□□ 0.02
CTCFL-218ENST00000608440 BCCIPQ9P287 314 aaKnown RBP eCLIP15.19■□□□□ 0.02
CTCFL-218ENST00000608440 MADDQ8WXG6 1647 aa15.19■□□□□ 0.02
CTCFL-218ENST00000608440 ADGRB3O60242 1522 aa15.19■□□□□ 0.02
CTCFL-218ENST00000608440 RASSF4Q9H2L5 321 aa15.18■□□□□ 0.02
CTCFL-218ENST00000608440 KIF1BO60333 1816 aa15.18■□□□□ 0.02
CTCFL-218ENST00000608440 MBD3O95983 291 aa15.18■□□□□ 0.02
CTCFL-218ENST00000608440 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
CTCFL-218ENST00000608440 C10orf67Q8IYJ2 551 aa15.18■□□□□ 0.02
CTCFL-218ENST00000608440 GPATCH11Q8N954 259 aa15.18■□□□□ 0.02
CTCFL-218ENST00000608440 FAM193AP78312 1265 aa15.17■□□□□ 0.02
CTCFL-218ENST00000608440 KMT5BQ4FZB7 885 aa15.17■□□□□ 0.02
CTCFL-218ENST00000608440 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
CTCFL-218ENST00000608440 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
CTCFL-218ENST00000608440 TRIM66O15016 1216 aa15.17■□□□□ 0.02
CTCFL-218ENST00000608440 HCLS1P14317 486 aaPredicted RBP15.17■□□□□ 0.02
CTCFL-218ENST00000608440 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
CTCFL-218ENST00000608440 CYP2C19P33261 490 aa15.16■□□□□ 0.02
CTCFL-218ENST00000608440 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
CTCFL-218ENST00000608440 GDPD2Q9HCC8 539 aa15.16■□□□□ 0.02
CTCFL-218ENST00000608440 CLTCQ00610 1675 aaKnown RBP15.16■□□□□ 0.02
CTCFL-218ENST00000608440 CDCA8Q53HL2 280 aa15.16■□□□□ 0.02
CTCFL-218ENST00000608440 ITPRIPQ8IWB1 547 aa15.16■□□□□ 0.02
CTCFL-218ENST00000608440 GPRASP1Q5JY77 1395 aa15.15■□□□□ 0.02
CTCFL-218ENST00000608440 NEURL4Q96JN8 1562 aa15.15■□□□□ 0.02
CTCFL-218ENST00000608440 ADGRF5Q8IZF2 1346 aa15.15■□□□□ 0.02
CTCFL-218ENST00000608440 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
CTCFL-218ENST00000608440 DZIP1LQ8IYY4 767 aaKnown RBP15.15■□□□□ 0.02
CTCFL-218ENST00000608440 BANK1Q8NDB2 785 aa15.15■□□□□ 0.02
CTCFL-218ENST00000608440 NEK11Q8NG66 645 aa15.15■□□□□ 0.02
CTCFL-218ENST00000608440 ZNF592Q92610 1267 aa15.15■□□□□ 0.02
CTCFL-218ENST00000608440 AXDND1Q5T1B0 1012 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-218ENST00000608440 CCDC112Q8NEF3 446 aa15.14■□□□□ 0.01
CTCFL-218ENST00000608440 PREX1Q8TCU6 1659 aa15.14■□□□□ 0.01
CTCFL-218ENST00000608440 NPHP1O15259 732 aa15.14■□□□□ 0.01
CTCFL-218ENST00000608440 RBM6P78332 1123 aaKnown RBP15.14■□□□□ 0.01
CTCFL-218ENST00000608440 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-218ENST00000608440 IDI1Q13907 227 aa15.14■□□□□ 0.01
CTCFL-218ENST00000608440 SYT10Q6XYQ8 523 aa15.14■□□□□ 0.01
CTCFL-218ENST00000608440 GTF3C6Q969F1 213 aa15.14■□□□□ 0.01
CTCFL-218ENST00000608440 SYAP1Q96A49 352 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-218ENST00000608440 PIK3C2BO00750 1634 aa15.13■□□□□ 0.01
CTCFL-218ENST00000608440 SMTNL1A8MU46 457 aa15.13■□□□□ 0.01
CTCFL-218ENST00000608440 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
CTCFL-218ENST00000608440 SYCP1Q15431 976 aa15.13■□□□□ 0.01
CTCFL-218ENST00000608440 CT47A1Q5JQC4 288 aaPredicted RBP15.13■□□□□ 0.01
CTCFL-218ENST00000608440 ZNF622Q969S3 477 aaKnown RBP eCLIP15.13■□□□□ 0.016e-15■□□□□ 10.1
CTCFL-218ENST00000608440 TESK2Q96S53 571 aa15.13■□□□□ 0.01
CTCFL-218ENST00000608440 MYCBPQ99417 103 aaPredicted RBP15.13■□□□□ 0.01
CTCFL-218ENST00000608440 MYOM2P54296 1465 aa15.13■□□□□ 0.01
CTCFL-218ENST00000608440 ERVK-7P63135 1459 aa15.13■□□□□ 0.01
CTCFL-218ENST00000608440 GADD45BO75293 160 aaPredicted RBP15.13■□□□□ 0.01
CTCFL-218ENST00000608440 TNNT1P13805 278 aa15.13■□□□□ 0.01
CTCFL-218ENST00000608440 UVSSAQ2YD98 709 aa15.13■□□□□ 0.01
CTCFL-218ENST00000608440 ESF1Q9H501 851 aaKnown RBP15.13■□□□□ 0.01
CTCFL-218ENST00000608440 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
CTCFL-218ENST00000608440 ICE2Q659A1 982 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 ZNF397Q8NF99 534 aaPredicted RBP15.12■□□□□ 0.01
CTCFL-218ENST00000608440 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
CTCFL-218ENST00000608440 IFT57Q9NWB7 429 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 KDM4AO75164 1064 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 TMF1P82094 1093 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 FAM184AQ8NB25 1140 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 LCMT1Q9UIC8 334 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
CTCFL-218ENST00000608440 RABEP1Q15276 862 aa15.11■□□□□ 0.01
CTCFL-218ENST00000608440 BMP2KLQ5H9B9 411 aa15.11■□□□□ 0.01
CTCFL-218ENST00000608440 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
CTCFL-218ENST00000608440 ZNF446Q9NWS9 450 aa15.11■□□□□ 0.01
CTCFL-218ENST00000608440 AP5Z1O43299 807 aa15.11■□□□□ 0.01
CTCFL-218ENST00000608440 NUCB1Q02818 461 aa15.11■□□□□ 0.01
CTCFL-218ENST00000608440 FBXO38Q6PIJ6 1188 aa15.11■□□□□ 0.01
CTCFL-218ENST00000608440 CHD1LQ86WJ1 897 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms