RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
CTCFL-213ENST00000607923 CHL1O00533 1208 aa17.08■□□□□ 0.32
CTCFL-213ENST00000607923 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.32
CTCFL-213ENST00000607923 XRCC6P12956 609 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTCFL-213ENST00000607923 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
CTCFL-213ENST00000607923 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
CTCFL-213ENST00000607923 DCTPP1Q9H773 170 aa17.07■□□□□ 0.32
CTCFL-213ENST00000607923 TMEM2Q9UHN6 1383 aa17.07■□□□□ 0.32
CTCFL-213ENST00000607923 L1TD1Q5T7N2 865 aaKnown RBP17.07■□□□□ 0.32
CTCFL-213ENST00000607923 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
CTCFL-213ENST00000607923 PIK3R4Q99570 1358 aa17.06■□□□□ 0.32
CTCFL-213ENST00000607923 SSFA2P28290 1259 aa17.06■□□□□ 0.32
CTCFL-213ENST00000607923 EXOC6BQ9Y2D4 811 aa17.06■□□□□ 0.32
CTCFL-213ENST00000607923 K7ELQ4 463 aaPredicted RBP17.05■□□□□ 0.32
CTCFL-213ENST00000607923 NLRP6P59044 892 aa17.05■□□□□ 0.32
CTCFL-213ENST00000607923 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
CTCFL-213ENST00000607923 TTC22Q5TAA0 569 aa17.05■□□□□ 0.32
CTCFL-213ENST00000607923 INTS3Q68E01 1043 aaKnown RBP17.05■□□□□ 0.32
CTCFL-213ENST00000607923 ANKRD44Q8N8A2 993 aa17.05■□□□□ 0.32
CTCFL-213ENST00000607923 SDSP20132 328 aa17.04■□□□□ 0.32
CTCFL-213ENST00000607923 AGLP35573 1532 aa17.04■□□□□ 0.32
CTCFL-213ENST00000607923 SNX21Q969T3 373 aa17.04■□□□□ 0.32
CTCFL-213ENST00000607923 EYA1Q99502 592 aa17.04■□□□□ 0.32
CTCFL-213ENST00000607923 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
CTCFL-213ENST00000607923 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
CTCFL-213ENST00000607923 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
CTCFL-213ENST00000607923 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.31
CTCFL-213ENST00000607923 NOL8Q76FK4 1167 aaKnown RBP17.02■□□□□ 0.31
CTCFL-213ENST00000607923 DDX11L8A8MPP1 907 aa17.01■□□□□ 0.31
CTCFL-213ENST00000607923 RRAGDQ9NQL2 400 aaPredicted RBP17.01■□□□□ 0.31
CTCFL-213ENST00000607923 RTL1A6NKG5 1358 aa17.01■□□□□ 0.31
CTCFL-213ENST00000607923 USP6P35125 1406 aa17.01■□□□□ 0.31
CTCFL-213ENST00000607923 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
CTCFL-213ENST00000607923 NCLP19338 710 aaKnown RBP17.01■□□□□ 0.31
CTCFL-213ENST00000607923 KNDC1Q76NI1 1749 aa17■□□□□ 0.31
CTCFL-213ENST00000607923 PLEKHG3A1L390 1219 aa17■□□□□ 0.31
CTCFL-213ENST00000607923 RPAP2Q8IXW5 612 aaPredicted RBP17■□□□□ 0.31
CTCFL-213ENST00000607923 GBP4Q96PP9 640 aa17■□□□□ 0.31
CTCFL-213ENST00000607923 STK31Q9BXU1 1019 aa17■□□□□ 0.31
CTCFL-213ENST00000607923 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
CTCFL-213ENST00000607923 AK9Q5TCS8 1911 aa16.99■□□□□ 0.31
CTCFL-213ENST00000607923 RIMS1Q86UR5 1692 aaKnown RBP16.99■□□□□ 0.31
CTCFL-213ENST00000607923 CHAMP1Q96JM3 812 aa16.99■□□□□ 0.31
CTCFL-213ENST00000607923 RGS12O14924 1447 aa16.99■□□□□ 0.31
CTCFL-213ENST00000607923 DDIT3P35638 169 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 PKP1Q13835 747 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 RAB3GAP1Q15042 981 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
CTCFL-213ENST00000607923 HAP1P54257 671 aaPredicted RBP16.98■□□□□ 0.31
CTCFL-213ENST00000607923 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 RILPL2Q969X0 211 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 USP26Q9BXU7 913 aa16.98■□□□□ 0.31
CTCFL-213ENST00000607923 C3P01024 1663 aa16.97■□□□□ 0.31
CTCFL-213ENST00000607923 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
CTCFL-213ENST00000607923 OVOS2A0A0J9YW53 1432 aa16.97■□□□□ 0.31
CTCFL-213ENST00000607923 OVOS2Q6IE36 1432 aa16.97■□□□□ 0.31
CTCFL-213ENST00000607923 TRIM6-TRIM34B2RNG4 842 aa16.97■□□□□ 0.31
CTCFL-213ENST00000607923 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
CTCFL-213ENST00000607923 PTPRCP08575 1304 aa16.97■□□□□ 0.31
CTCFL-213ENST00000607923 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
CTCFL-213ENST00000607923 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
CTCFL-213ENST00000607923 MCTP1Q6DN14 999 aa16.96■□□□□ 0.31
CTCFL-213ENST00000607923 ZGPATQ8N5A5 531 aaKnown RBP16.96■□□□□ 0.31
CTCFL-213ENST00000607923 TECPR2O15040 1411 aa16.96■□□□□ 0.31
CTCFL-213ENST00000607923 CRB1P82279 1406 aa16.96■□□□□ 0.31
CTCFL-213ENST00000607923 PNMA6EA0A0J9YXQ4 647 aa16.95■□□□□ 0.3
CTCFL-213ENST00000607923 HMMRO75330 724 aa16.95■□□□□ 0.3
CTCFL-213ENST00000607923 GRPEL1Q9HAV7 217 aa16.95■□□□□ 0.3
CTCFL-213ENST00000607923 PEAK1Q9H792 1746 aa16.95■□□□□ 0.3
CTCFL-213ENST00000607923 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
CTCFL-213ENST00000607923 FLIIQ13045 1269 aa16.95■□□□□ 0.3
CTCFL-213ENST00000607923 IL1RAPL2Q9NP60 686 aa16.95■□□□□ 0.3
CTCFL-213ENST00000607923 MAP4K4O95819 1239 aaPredicted RBP16.95■□□□□ 0.3
CTCFL-213ENST00000607923 TPRNQ4KMQ1 711 aa16.94■□□□□ 0.3
CTCFL-213ENST00000607923 NCOA3Q9Y6Q9 1424 aa16.94■□□□□ 0.3
CTCFL-213ENST00000607923 GNAI2P04899 355 aa16.94■□□□□ 0.3
CTCFL-213ENST00000607923 DDX49Q9Y6V7 483 aaKnown RBP16.94■□□□□ 0.3
CTCFL-213ENST00000607923 AKAP12Q02952 1782 aa16.93■□□□□ 0.3
CTCFL-213ENST00000607923 ANXA1P04083 346 aa16.93■□□□□ 0.3
CTCFL-213ENST00000607923 KCNA6P17658 529 aa16.93■□□□□ 0.3
CTCFL-213ENST00000607923 RABEP1Q15276 862 aa16.93■□□□□ 0.3
CTCFL-213ENST00000607923 FOXD4L6Q3SYB3 417 aaPredicted RBP16.93■□□□□ 0.3
CTCFL-213ENST00000607923 FOXD4L3Q6VB84 417 aaPredicted RBP16.93■□□□□ 0.3
CTCFL-213ENST00000607923 LRRFIP2Q9Y608 721 aaKnown RBP16.93■□□□□ 0.3
CTCFL-213ENST00000607923 SETD1BQ9UPS6 1966 aaKnown RBP16.93■□□□□ 0.3
CTCFL-213ENST00000607923 FLT4P35916 1363 aa16.93■□□□□ 0.3
CTCFL-213ENST00000607923 PDE1AP54750 535 aa16.93■□□□□ 0.3
CTCFL-213ENST00000607923 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
CTCFL-213ENST00000607923 REREQ9P2R6 1566 aa16.93■□□□□ 0.3
CTCFL-213ENST00000607923 KIAA0232Q92628 1395 aa16.93■□□□□ 0.3
CTCFL-213ENST00000607923 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
CTCFL-213ENST00000607923 CIZ1Q9ULV3 898 aaPredicted RBP16.92■□□□□ 0.3
CTCFL-213ENST00000607923 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
CTCFL-213ENST00000607923 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
CTCFL-213ENST00000607923 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
CTCFL-213ENST00000607923 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms