RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
PTPN23-206ENST00000602307 ATP2B2Q01814 1243 aa14.35□□□□□ -0.11
PTPN23-206ENST00000602307 RPRD2Q5VT52 1461 aaKnown RBP14.35□□□□□ -0.11
PTPN23-206ENST00000602307 EPS15P42566 896 aa14.35□□□□□ -0.11
PTPN23-206ENST00000602307 GNL3LQ9NVN8 582 aaKnown RBP14.35□□□□□ -0.11
PTPN23-206ENST00000602307 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
PTPN23-206ENST00000602307 ANKRD1Q15327 319 aa14.35□□□□□ -0.11
PTPN23-206ENST00000602307 NUP133Q8WUM0 1156 aa14.35□□□□□ -0.11
PTPN23-206ENST00000602307 PATL2C9JE40 543 aaKnown RBP14.35□□□□□ -0.11
PTPN23-206ENST00000602307 PTCD1O75127 700 aaKnown RBP14.35□□□□□ -0.11
PTPN23-206ENST00000602307 KRT85P78386 507 aa14.35□□□□□ -0.11
PTPN23-206ENST00000602307 PDRG1Q9NUG6 133 aa14.35□□□□□ -0.11
PTPN23-206ENST00000602307 SLC3A2P08195 630 aaKnown RBP14.34□□□□□ -0.11
PTPN23-206ENST00000602307 CT47A1Q5JQC4 288 aaPredicted RBP14.34□□□□□ -0.11
PTPN23-206ENST00000602307 UPF3BQ9BZI7 483 aaKnown RBP14.34□□□□□ -0.11
PTPN23-206ENST00000602307 F6X3S4 739 aa14.34□□□□□ -0.11
PTPN23-206ENST00000602307 ARGLU1Q9NWB6 273 aaPredicted RBP14.34□□□□□ -0.11
PTPN23-206ENST00000602307 FBXO31Q5XUX0 539 aaPredicted RBP14.34□□□□□ -0.11
PTPN23-206ENST00000602307 TNMDQ9H2S6 317 aa14.34□□□□□ -0.11
PTPN23-206ENST00000602307 NACAP1Q9BZK3 213 aa14.34□□□□□ -0.11
PTPN23-206ENST00000602307 TEX35Q5T0J7 233 aa14.33□□□□□ -0.11
PTPN23-206ENST00000602307 GRPEL1Q9HAV7 217 aa14.33□□□□□ -0.11
PTPN23-206ENST00000602307 AEBP1Q8IUX7 1158 aa14.33□□□□□ -0.12
PTPN23-206ENST00000602307 CCDC192P0DO97 292 aa14.33□□□□□ -0.12
PTPN23-206ENST00000602307 TRIM22Q8IYM9 498 aa14.33□□□□□ -0.12
PTPN23-206ENST00000602307 ADAMTS12P58397 1594 aa14.33□□□□□ -0.12
PTPN23-206ENST00000602307 CCDC173Q0VFZ6 552 aa14.32□□□□□ -0.12
PTPN23-206ENST00000602307 IDI1Q13907 227 aa14.32□□□□□ -0.12
PTPN23-206ENST00000602307 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
PTPN23-206ENST00000602307 CDK5RAP3Q96JB5 506 aa14.32□□□□□ -0.12
PTPN23-206ENST00000602307 RUFY1Q96T51 708 aa14.32□□□□□ -0.12
PTPN23-206ENST00000602307 TXLNAP40222 546 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 RBM10P98175 930 aaKnown RBP14.31□□□□□ -0.12
PTPN23-206ENST00000602307 AEBP2Q6ZN18 517 aaPredicted RBP14.31□□□□□ -0.12
PTPN23-206ENST00000602307 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 CCDC69A6NI79 296 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 IDH1O75874 414 aaKnown RBP14.31□□□□□ -0.12
PTPN23-206ENST00000602307 FERMT3Q86UX7 667 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 GPATCH8Q9UKJ3 1502 aaKnown RBP14.31□□□□□ -0.12
PTPN23-206ENST00000602307 NUP153P49790 1475 aaKnown RBP14.31□□□□□ -0.12
PTPN23-206ENST00000602307 BICDL1Q6ZP65 573 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 SERPINC1P01008 464 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 FILIP1LQ4L180 1135 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
PTPN23-206ENST00000602307 MX1P20591 662 aa14.3□□□□□ -0.12
PTPN23-206ENST00000602307 CASTP20810 708 aaKnown RBP14.3□□□□□ -0.12
PTPN23-206ENST00000602307 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
PTPN23-206ENST00000602307 SPATA32Q96LK8 384 aa14.3□□□□□ -0.12
PTPN23-206ENST00000602307 HSP90B2PQ58FF3 399 aa14.3□□□□□ -0.12
PTPN23-206ENST00000602307 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
PTPN23-206ENST00000602307 FOXO3O43524 673 aa14.29□□□□□ -0.12
PTPN23-206ENST00000602307 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
PTPN23-206ENST00000602307 BOLA2Q9H3K6 86 aa14.29□□□□□ -0.12
PTPN23-206ENST00000602307 TDO2P48775 406 aa14.29□□□□□ -0.12
PTPN23-206ENST00000602307 KIF1BPQ96EK5 621 aa14.29□□□□□ -0.12
PTPN23-206ENST00000602307 KRT18P05783 430 aaKnown RBP14.29□□□□□ -0.12
PTPN23-206ENST00000602307 MPRIPQ6WCQ1 1025 aa14.29□□□□□ -0.12
PTPN23-206ENST00000602307 PIBF1Q8WXW3 757 aa14.29□□□□□ -0.12
PTPN23-206ENST00000602307 WDR62O43379 1518 aa14.29□□□□□ -0.12
PTPN23-206ENST00000602307 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
PTPN23-206ENST00000602307 RAI14Q9P0K7 980 aa14.29□□□□□ -0.12
PTPN23-206ENST00000602307 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
PTPN23-206ENST00000602307 SETQ01105 290 aaPredicted RBP14.28□□□□□ -0.12
PTPN23-206ENST00000602307 KCNH5Q8NCM2 988 aa14.28□□□□□ -0.12
PTPN23-206ENST00000602307 PPP1R1BQ9UD71 204 aaPredicted RBP14.28□□□□□ -0.12
PTPN23-206ENST00000602307 ODF2Q5BJF6 829 aa14.28□□□□□ -0.12
PTPN23-206ENST00000602307 ZSCAN25Q6NSZ9 544 aa14.28□□□□□ -0.12
PTPN23-206ENST00000602307 MAGEC2Q9UBF1 373 aaPredicted RBP14.28□□□□□ -0.12
PTPN23-206ENST00000602307 TRIM27P14373 513 aa14.28□□□□□ -0.12
PTPN23-206ENST00000602307 PRPF40BQ6NWY9 871 aaKnown RBP14.28□□□□□ -0.12
PTPN23-206ENST00000602307 ZSCAN31Q96LW9 406 aaPredicted RBP14.28□□□□□ -0.12
PTPN23-206ENST00000602307 LRP2BPQ9P2M1 347 aa14.28□□□□□ -0.12
PTPN23-206ENST00000602307 ABCF2Q9UG63 623 aa14.28□□□□□ -0.12
PTPN23-206ENST00000602307 FBLN1P23142 703 aa14.28□□□□□ -0.12
PTPN23-206ENST00000602307 CEBPAP49715 358 aaPredicted RBP14.28□□□□□ -0.12
PTPN23-206ENST00000602307 KIAA0556O60303 1618 aa14.27□□□□□ -0.12
PTPN23-206ENST00000602307 ALDH1L2Q3SY69 923 aa14.27□□□□□ -0.12
PTPN23-206ENST00000602307 CCAR1Q8IX12 1150 aaKnown RBP14.27□□□□□ -0.12
PTPN23-206ENST00000602307 ZHX3Q9H4I2 956 aa14.27□□□□□ -0.12
PTPN23-206ENST00000602307 CTNNA3Q9UI47 895 aa14.27□□□□□ -0.12
PTPN23-206ENST00000602307 ESPNB1AK53 854 aa14.27□□□□□ -0.13
PTPN23-206ENST00000602307 CCDC83Q8IWF9 413 aa14.27□□□□□ -0.13
PTPN23-206ENST00000602307 FBXO3Q9UK99 471 aa14.27□□□□□ -0.13
PTPN23-206ENST00000602307 UBAC1Q9BSL1 405 aa14.27□□□□□ -0.13
PTPN23-206ENST00000602307 CD109Q6YHK3 1445 aa14.27□□□□□ -0.13
PTPN23-206ENST00000602307 GLRX3O76003 335 aaKnown RBP14.27□□□□□ -0.13
PTPN23-206ENST00000602307 MYD88Q99836 296 aa14.27□□□□□ -0.13
PTPN23-206ENST00000602307 CCDC8Q9H0W5 538 aaPredicted RBP14.26□□□□□ -0.13
PTPN23-206ENST00000602307 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
PTPN23-206ENST00000602307 FAM177A1Q8N128 213 aaPredicted RBP14.26□□□□□ -0.13
PTPN23-206ENST00000602307 SMARCE1Q969G3 411 aa14.26□□□□□ -0.13
PTPN23-206ENST00000602307 AK7Q96M32 723 aa14.26□□□□□ -0.13
PTPN23-206ENST00000602307 TBC1D2Q9BYX2 928 aa14.26□□□□□ -0.13
PTPN23-206ENST00000602307 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
PTPN23-206ENST00000602307 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
PTPN23-206ENST00000602307 WASLO00401 505 aaPredicted RBP14.26□□□□□ -0.13
PTPN23-206ENST00000602307 IGHDP01880 384 aa14.26□□□□□ -0.13
PTPN23-206ENST00000602307 PIP4K2BP78356 416 aa14.26□□□□□ -0.13
PTPN23-206ENST00000602307 KRT32Q14532 448 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms