RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 PRIM1P49642 420 aaKnown RBP19.83■□□□□ 0.77
HOMER3-212ENST00000600077 JMYQ8N9B5 988 aa19.83■□□□□ 0.77
HOMER3-212ENST00000600077 EVC2Q86UK5 1308 aa19.82■□□□□ 0.76
HOMER3-212ENST00000600077 ANKRD24Q8TF21 1146 aa19.82■□□□□ 0.76
HOMER3-212ENST00000600077 KLRG1Q96E93 195 aa19.82■□□□□ 0.76
HOMER3-212ENST00000600077 IGSF1Q8N6C5 1336 aa19.81■□□□□ 0.76
HOMER3-212ENST00000600077 NBPF1Q3BBV0 1214 aa19.81■□□□□ 0.76
HOMER3-212ENST00000600077 USP47Q96K76 1375 aa19.78■□□□□ 0.76
HOMER3-212ENST00000600077 RBM46Q8TBY0 533 aaKnown RBP19.77■□□□□ 0.76
HOMER3-212ENST00000600077 WDR90Q96KV7 1748 aa19.76■□□□□ 0.75
HOMER3-212ENST00000600077 NSD2O96028 1365 aa19.76■□□□□ 0.75
HOMER3-212ENST00000600077 USP31Q70CQ4 1352 aa19.76■□□□□ 0.75
HOMER3-212ENST00000600077 KTN1Q86UP2 1357 aaKnown RBP19.76■□□□□ 0.75
HOMER3-212ENST00000600077 RAB3GAP2Q9H2M9 1393 aa19.75■□□□□ 0.75
HOMER3-212ENST00000600077 FSTL1Q12841 308 aa19.73■□□□□ 0.75
HOMER3-212ENST00000600077 C16orf71Q8IYS4 520 aaPredicted RBP19.73■□□□□ 0.75
HOMER3-212ENST00000600077 WWC3Q9ULE0 1092 aa19.73■□□□□ 0.75
HOMER3-212ENST00000600077 DOT1LQ8TEK3 1739 aa19.73■□□□□ 0.75
HOMER3-212ENST00000600077 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
HOMER3-212ENST00000600077 LTN1O94822 1766 aa19.72■□□□□ 0.75
HOMER3-212ENST00000600077 ZCRB1Q8TBF4 217 aaKnown RBP19.71■□□□□ 0.75
HOMER3-212ENST00000600077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.7■□□□□ 0.74
HOMER3-212ENST00000600077 NMRK2Q9NPI5 230 aa19.7■□□□□ 0.74
HOMER3-212ENST00000600077 C5P01031 1676 aa19.68■□□□□ 0.74
HOMER3-212ENST00000600077 USP54Q70EL1 1684 aa19.68■□□□□ 0.74
HOMER3-212ENST00000600077 IP6K1Q92551 441 aa19.68■□□□□ 0.74
HOMER3-212ENST00000600077 FAM208AQ9UK61 1670 aaKnown RBP19.68■□□□□ 0.74
HOMER3-212ENST00000600077 NSD3Q9BZ95 1437 aa19.68■□□□□ 0.74
HOMER3-212ENST00000600077 SLC34A2O95436 690 aa19.67■□□□□ 0.74
HOMER3-212ENST00000600077 HTRA3P83110 453 aa19.67■□□□□ 0.74
HOMER3-212ENST00000600077 AK7Q96M32 723 aa19.67■□□□□ 0.74
HOMER3-212ENST00000600077 NME9Q86XW9 330 aa19.65■□□□□ 0.74
HOMER3-212ENST00000600077 LTV1Q96GA3 475 aaPredicted RBP19.65■□□□□ 0.74
HOMER3-212ENST00000600077 MON2Q7Z3U7 1717 aa19.65■□□□□ 0.74
HOMER3-212ENST00000600077 TGFB2P61812 414 aa19.63■□□□□ 0.73
HOMER3-212ENST00000600077 ARHGAP27Q6ZUM4 889 aa19.63■□□□□ 0.73
HOMER3-212ENST00000600077 PALLDQ8WX93 1383 aa19.62■□□□□ 0.73
HOMER3-212ENST00000600077 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
HOMER3-212ENST00000600077 CGNL1Q0VF96 1302 aa19.62■□□□□ 0.73
HOMER3-212ENST00000600077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.62■□□□□ 0.73
HOMER3-212ENST00000600077 SSFA2P28290 1259 aa19.62■□□□□ 0.73
HOMER3-212ENST00000600077 BCS1LQ9Y276 419 aa19.62■□□□□ 0.73
HOMER3-212ENST00000600077 KDM2BQ8NHM5 1336 aa19.61■□□□□ 0.73
HOMER3-212ENST00000600077 TAF1LQ8IZX4 1826 aa19.61■□□□□ 0.73
HOMER3-212ENST00000600077 SMARCC1Q92922 1105 aaPredicted RBP19.61■□□□□ 0.73
HOMER3-212ENST00000600077 SBNO2Q9Y2G9 1366 aa19.6■□□□□ 0.73
HOMER3-212ENST00000600077 PHF14O94880 888 aa19.6■□□□□ 0.73
HOMER3-212ENST00000600077 C4BP0C0L5 1744 aa19.59■□□□□ 0.73
HOMER3-212ENST00000600077 HSPA1AP0DMV8 641 aaKnown RBP19.59■□□□□ 0.73
HOMER3-212ENST00000600077 HSPA1BP0DMV9 641 aaKnown RBP19.59■□□□□ 0.73
HOMER3-212ENST00000600077 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
HOMER3-212ENST00000600077 SMC1BQ8NDV3 1235 aa19.58■□□□□ 0.72
HOMER3-212ENST00000600077 PXDNLA1KZ92 1463 aa19.58■□□□□ 0.72
HOMER3-212ENST00000600077 C10orf71Q711Q0 1435 aa19.58■□□□□ 0.72
HOMER3-212ENST00000600077 MEGF6O75095 1541 aa19.57■□□□□ 0.72
HOMER3-212ENST00000600077 C9orf131Q5VYM1 1079 aa19.56■□□□□ 0.72
HOMER3-212ENST00000600077 MPRIPQ6WCQ1 1025 aa19.56■□□□□ 0.72
HOMER3-212ENST00000600077 AMIGO3Q86WK7 504 aa19.56■□□□□ 0.72
HOMER3-212ENST00000600077 UBR3Q6ZT12 1888 aa19.56■□□□□ 0.72
HOMER3-212ENST00000600077 EDC4Q6P2E9 1401 aaKnown RBP19.55■□□□□ 0.72
HOMER3-212ENST00000600077 RAPGEF4Q8WZA2 1011 aa19.55■□□□□ 0.72
HOMER3-212ENST00000600077 TOGARAM1Q9Y4F4 1720 aa19.54■□□□□ 0.72
HOMER3-212ENST00000600077 A0A0G2JLW4 131 aa19.54■□□□□ 0.72
HOMER3-212ENST00000600077 FCHSD2O94868 740 aa19.54■□□□□ 0.72
HOMER3-212ENST00000600077 MMP10P09238 476 aa19.54■□□□□ 0.72
HOMER3-212ENST00000600077 HOXC9P31274 260 aa19.54■□□□□ 0.72
HOMER3-212ENST00000600077 AMPHP49418 695 aa19.54■□□□□ 0.72
HOMER3-212ENST00000600077 PCDH10Q9P2E7 1040 aa19.54■□□□□ 0.72
HOMER3-212ENST00000600077 PCDH11XQ9BZA7 1347 aa19.53■□□□□ 0.72
HOMER3-212ENST00000600077 PCDH11YQ9BZA8 1340 aa19.53■□□□□ 0.72
HOMER3-212ENST00000600077 KIF13BQ9NQT8 1826 aa19.53■□□□□ 0.72
HOMER3-212ENST00000600077 RRAGCQ9HB90 399 aa19.53■□□□□ 0.72
HOMER3-212ENST00000600077 CD163L1Q9NR16 1453 aa19.53■□□□□ 0.72
HOMER3-212ENST00000600077 TATP17735 454 aaPredicted RBP19.52■□□□□ 0.72
HOMER3-212ENST00000600077 TMC1Q8TDI8 760 aa19.52■□□□□ 0.72
HOMER3-212ENST00000600077 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
HOMER3-212ENST00000600077 PCNTO95613 3336 aa19.51■□□□□ 0.71
HOMER3-212ENST00000600077 KCPQ6ZWJ8 1503 aa19.51■□□□□ 0.71
HOMER3-212ENST00000600077 MAP3K19Q56UN5 1328 aa19.51■□□□□ 0.71
HOMER3-212ENST00000600077 SMIM5Q71RC9 77 aa19.5■□□□□ 0.71
HOMER3-212ENST00000600077 NLGN1Q8N2Q7 840 aa19.5■□□□□ 0.71
HOMER3-212ENST00000600077 CCDC87Q9NVE4 849 aa19.5■□□□□ 0.71
HOMER3-212ENST00000600077 N4BP2Q86UW6 1770 aaPredicted RBP19.49■□□□□ 0.71
HOMER3-212ENST00000600077 KIAA1551Q9HCM1 1747 aa19.49■□□□□ 0.71
HOMER3-212ENST00000600077 DPEP1P16444 411 aa19.49■□□□□ 0.71
HOMER3-212ENST00000600077 GNPATO15228 680 aa19.48■□□□□ 0.71
HOMER3-212ENST00000600077 NBPF6Q5VWK0 638 aa19.48■□□□□ 0.71
HOMER3-212ENST00000600077 NBPF4Q96M43 638 aa19.48■□□□□ 0.71
HOMER3-212ENST00000600077 TNRC6CQ9HCJ0 1690 aaKnown RBP19.48■□□□□ 0.71
HOMER3-212ENST00000600077 ROCK2O75116 1388 aaKnown RBP19.47■□□□□ 0.71
HOMER3-212ENST00000600077 LOC102724428A0A0B4J2F2 783 aa19.47■□□□□ 0.71
HOMER3-212ENST00000600077 SIK1P57059 783 aa19.47■□□□□ 0.71
HOMER3-212ENST00000600077 LINC00116Q8NCU8 138 aa19.47■□□□□ 0.71
HOMER3-212ENST00000600077 COG3Q96JB2 828 aa19.47■□□□□ 0.71
HOMER3-212ENST00000600077 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
HOMER3-212ENST00000600077 RNF181Q9P0P0 153 aa19.47■□□□□ 0.71
HOMER3-212ENST00000600077 RGPD2P0DJD1 1756 aa19.47■□□□□ 0.71
HOMER3-212ENST00000600077 PKD1L3Q7Z443 1732 aa19.46■□□□□ 0.71
HOMER3-212ENST00000600077 SMG6Q86US8 1419 aaKnown RBP19.46■□□□□ 0.71
HOMER3-212ENST00000600077 TMF1P82094 1093 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms