RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 PLEKHG2Q9H7P9 1386 aa24.48■■□□□ 1.51
IRF3-216ENST00000597180 NHSQ6T4R5 1651 aa24.47■■□□□ 1.51
IRF3-216ENST00000597180 PPP2R1AP30153 589 aa24.47■■□□□ 1.51
IRF3-216ENST00000597180 ZCRB1Q8TBF4 217 aaKnown RBP24.47■■□□□ 1.51
IRF3-216ENST00000597180 KAT6BQ8WYB5 2073 aa24.46■■□□□ 1.51
IRF3-216ENST00000597180 TRIM37O94972 964 aa24.46■■□□□ 1.51
IRF3-216ENST00000597180 SF3B2Q13435 895 aaKnown RBP24.46■■□□□ 1.51
IRF3-216ENST00000597180 KDRP35968 1356 aa24.44■■□□□ 1.5
IRF3-216ENST00000597180 DIAPH1O60610 1272 aaKnown RBP24.44■■□□□ 1.5
IRF3-216ENST00000597180 DOT1LQ8TEK3 1739 aa24.43■■□□□ 1.5
IRF3-216ENST00000597180 RGPD3A6NKT7 1758 aaPredicted RBP24.42■■□□□ 1.5
IRF3-216ENST00000597180 RGPD4Q7Z3J3 1758 aa24.42■■□□□ 1.5
IRF3-216ENST00000597180 DDX54Q8TDD1 881 aaKnown RBP24.42■■□□□ 1.5
IRF3-216ENST00000597180 PCDH11XQ9BZA7 1347 aa24.41■■□□□ 1.5
IRF3-216ENST00000597180 PCDH11YQ9BZA8 1340 aa24.41■■□□□ 1.5
IRF3-216ENST00000597180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.41■■□□□ 1.5
IRF3-216ENST00000597180 BAG6P46379 1132 aa24.4■■□□□ 1.5
IRF3-216ENST00000597180 RALBP1Q15311 655 aa24.4■■□□□ 1.5
IRF3-216ENST00000597180 CFAP53Q96M91 514 aa24.4■■□□□ 1.5
IRF3-216ENST00000597180 DEFB132Q7Z7B7 95 aa24.39■■□□□ 1.49
IRF3-216ENST00000597180 AEBP1Q8IUX7 1158 aa24.39■■□□□ 1.49
IRF3-216ENST00000597180 BCL11BQ9C0K0 894 aaPredicted RBP24.39■■□□□ 1.49
IRF3-216ENST00000597180 BTAF1O14981 1849 aa24.39■■□□□ 1.49
IRF3-216ENST00000597180 SULT6B1Q6IMI4 303 aa24.38■■□□□ 1.49
IRF3-216ENST00000597180 SPG7Q9UQ90 795 aa24.38■■□□□ 1.49
IRF3-216ENST00000597180 RREB1Q92766 1687 aa24.37■■□□□ 1.49
IRF3-216ENST00000597180 TOGARAM1Q9Y4F4 1720 aa24.36■■□□□ 1.49
IRF3-216ENST00000597180 CYP27B1O15528 508 aa24.36■■□□□ 1.49
IRF3-216ENST00000597180 ITGB4P16144 1822 aa24.35■■□□□ 1.49
IRF3-216ENST00000597180 APBA3O96018 575 aa24.35■■□□□ 1.49
IRF3-216ENST00000597180 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
IRF3-216ENST00000597180 KCNQ2O43526 872 aa24.33■■□□□ 1.49
IRF3-216ENST00000597180 EN1Q05925 392 aaPredicted RBP24.33■■□□□ 1.49
IRF3-216ENST00000597180 ACSBG1Q96GR2 724 aa24.33■■□□□ 1.49
IRF3-216ENST00000597180 NKX1-1Q15270 411 aaPredicted RBP24.32■■□□□ 1.48
IRF3-216ENST00000597180 AMOTQ4VCS5 1084 aa24.32■■□□□ 1.48
IRF3-216ENST00000597180 PLEKHO1Q53GL0 409 aaPredicted RBP24.32■■□□□ 1.48
IRF3-216ENST00000597180 CAMKK2Q96RR4 588 aa24.32■■□□□ 1.48
IRF3-216ENST00000597180 HMOX1P09601 288 aa24.31■■□□□ 1.48
IRF3-216ENST00000597180 NUP188Q5SRE5 1749 aa24.31■■□□□ 1.48
IRF3-216ENST00000597180 MYBBP1AQ9BQG0 1328 aaKnown RBP24.31■■□□□ 1.48
IRF3-216ENST00000597180 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
IRF3-216ENST00000597180 U2SURPO15042 1029 aaKnown RBP24.3■■□□□ 1.48
IRF3-216ENST00000597180 PLSCR1O15162 318 aa24.3■■□□□ 1.48
IRF3-216ENST00000597180 PHKG2P15735 406 aa24.3■■□□□ 1.48
IRF3-216ENST00000597180 IFNL2Q8IZJ0 200 aa24.3■■□□□ 1.48
IRF3-216ENST00000597180 NUDCQ9Y266 331 aa24.3■■□□□ 1.48
IRF3-216ENST00000597180 PRKRIP1Q9H875 184 aaPredicted RBP24.29■■□□□ 1.48
IRF3-216ENST00000597180 EZH2Q15910 746 aaKnown RBP24.28■■□□□ 1.48
IRF3-216ENST00000597180 SCN11AQ9UI33 1791 aa24.27■■□□□ 1.48
IRF3-216ENST00000597180 PRIM1P49642 420 aaKnown RBP24.27■■□□□ 1.48
IRF3-216ENST00000597180 LY75O60449 1722 aa24.26■■□□□ 1.47
IRF3-216ENST00000597180 ZNF530Q6P9A1 599 aaPredicted RBP24.25■■□□□ 1.47
IRF3-216ENST00000597180 RSPH6AQ9H0K4 717 aa24.24■■□□□ 1.47
IRF3-216ENST00000597180 HSP90AB1P08238 724 aaKnown RBP24.23■■□□□ 1.47
IRF3-216ENST00000597180 SYTL4Q96C24 671 aaPredicted RBP24.23■■□□□ 1.47
IRF3-216ENST00000597180 ADAMTS7Q9UKP4 1686 aa24.22■■□□□ 1.47
IRF3-216ENST00000597180 U2AF1L5P0DN76 240 aaPredicted RBP24.22■■□□□ 1.47
IRF3-216ENST00000597180 U2AF1Q01081 240 aaKnown RBP eCLIP24.22■■□□□ 1.47
IRF3-216ENST00000597180 KDM6AO15550 1401 aaPredicted RBP24.21■■□□□ 1.47
IRF3-216ENST00000597180 C1orf141Q5JVX7 400 aa24.21■■□□□ 1.47
IRF3-216ENST00000597180 FCHSD2O94868 740 aa24.2■■□□□ 1.46
IRF3-216ENST00000597180 DCAF5Q96JK2 942 aa24.2■■□□□ 1.46
IRF3-216ENST00000597180 PRKAR2BP31323 418 aa24.19■■□□□ 1.46
IRF3-216ENST00000597180 MTHFSDQ2M296 383 aaKnown RBP24.19■■□□□ 1.46
IRF3-216ENST00000597180 PROM2Q8N271 834 aa24.19■■□□□ 1.46
IRF3-216ENST00000597180 AKAP4Q5JQC9 854 aa24.18■■□□□ 1.46
IRF3-216ENST00000597180 ERVV-2B6SEH9 535 aa24.17■■□□□ 1.46
IRF3-216ENST00000597180 TXNRD1Q16881 649 aa24.17■■□□□ 1.46
IRF3-216ENST00000597180 MPRIPQ6WCQ1 1025 aa24.17■■□□□ 1.46
IRF3-216ENST00000597180 PAPPAQ13219 1627 aa24.16■■□□□ 1.46
IRF3-216ENST00000597180 GAS2L2Q8NHY3 880 aa24.15■■□□□ 1.46
IRF3-216ENST00000597180 PIGBQ92521 554 aa24.15■■□□□ 1.46
IRF3-216ENST00000597180 PHACTR3Q96KR7 559 aa24.15■■□□□ 1.46
IRF3-216ENST00000597180 DLG5Q8TDM6 1919 aa24.14■■□□□ 1.46
IRF3-216ENST00000597180 TMOD3Q9NYL9 352 aa24.14■■□□□ 1.45
IRF3-216ENST00000597180 MRC1P22897 1456 aa24.13■■□□□ 1.45
IRF3-216ENST00000597180 TAF1LQ8IZX4 1826 aa24.12■■□□□ 1.45
IRF3-216ENST00000597180 MAP3K5Q99683 1374 aa24.12■■□□□ 1.45
IRF3-216ENST00000597180 SLC27A3Q5K4L6 730 aa24.11■■□□□ 1.45
IRF3-216ENST00000597180 SIPA1L3O60292 1781 aaPredicted RBP24.11■■□□□ 1.45
IRF3-216ENST00000597180 ANP32CO43423 234 aa24.1■■□□□ 1.45
IRF3-216ENST00000597180 SMARCC1Q92922 1105 aaPredicted RBP24.1■■□□□ 1.45
IRF3-216ENST00000597180 PLEKHF1Q96S99 279 aa24.1■■□□□ 1.45
IRF3-216ENST00000597180 PALLDQ8WX93 1383 aa24.1■■□□□ 1.45
IRF3-216ENST00000597180 C5P01031 1676 aa24.09■■□□□ 1.45
IRF3-216ENST00000597180 RNMTO43148 476 aaKnown RBP24.09■■□□□ 1.45
IRF3-216ENST00000597180 CABP4P57796 275 aa24.09■■□□□ 1.45
IRF3-216ENST00000597180 NBPF14Q5TI25 921 aa24.09■■□□□ 1.45
IRF3-216ENST00000597180 LRRC4BQ9NT99 713 aa24.09■■□□□ 1.45
IRF3-216ENST00000597180 ZNF831Q5JPB2 1677 aa24.08■■□□□ 1.45
IRF3-216ENST00000597180 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
IRF3-216ENST00000597180 PNNQ9H307 717 aaKnown RBP24.08■■□□□ 1.45
IRF3-216ENST00000597180 LGR6Q9HBX8 967 aa24.08■■□□□ 1.45
IRF3-216ENST00000597180 ANO8Q9HCE9 1232 aaPredicted RBP24.06■■□□□ 1.44
IRF3-216ENST00000597180 ASAP1Q9ULH1 1129 aa24.06■■□□□ 1.44
IRF3-216ENST00000597180 QSER1Q2KHR3 1735 aa24.06■■□□□ 1.44
IRF3-216ENST00000597180 NEFMP07197 916 aa24.05■■□□□ 1.44
IRF3-216ENST00000597180 NFATC2IPQ8NCF5 419 aa24.05■■□□□ 1.44
IRF3-216ENST00000597180 SLC52A2Q9HAB3 445 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms