RNA–Protein interactions for RNA: ENST00000596338.5

TRPM4-207, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-207ENST00000596338 K7ELQ4 463 aaPredicted RBP18.34■□□□□ 0.53
TRPM4-207ENST00000596338 CHL1O00533 1208 aa18.34■□□□□ 0.53
TRPM4-207ENST00000596338 ABCC4O15439 1325 aa18.34■□□□□ 0.53
TRPM4-207ENST00000596338 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.53
TRPM4-207ENST00000596338 ANTXR1Q9H6X2 564 aa18.33■□□□□ 0.53
TRPM4-207ENST00000596338 MED14O60244 1454 aa18.33■□□□□ 0.53
TRPM4-207ENST00000596338 NLRP1Q9C000 1473 aa18.33■□□□□ 0.53
TRPM4-207ENST00000596338 USP32Q8NFA0 1604 aa18.33■□□□□ 0.52
TRPM4-207ENST00000596338 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
TRPM4-207ENST00000596338 CCDC30Q5VVM6 783 aa18.32■□□□□ 0.52
TRPM4-207ENST00000596338 ANKRD44Q8N8A2 993 aa18.32■□□□□ 0.52
TRPM4-207ENST00000596338 GNAI2P04899 355 aa18.32■□□□□ 0.52
TRPM4-207ENST00000596338 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
TRPM4-207ENST00000596338 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
TRPM4-207ENST00000596338 AATKQ6ZMQ8 1374 aa18.31■□□□□ 0.52
TRPM4-207ENST00000596338 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
TRPM4-207ENST00000596338 FOXD4L6Q3SYB3 417 aaPredicted RBP18.31■□□□□ 0.52
TRPM4-207ENST00000596338 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
TRPM4-207ENST00000596338 FOXD4L3Q6VB84 417 aaPredicted RBP18.31■□□□□ 0.52
TRPM4-207ENST00000596338 ANP32BQ92688 251 aaKnown RBP18.31■□□□□ 0.52
TRPM4-207ENST00000596338 TNPO1Q92973 898 aaKnown RBP18.31■□□□□ 0.52
TRPM4-207ENST00000596338 CPS1P31327 1500 aa18.31■□□□□ 0.52
TRPM4-207ENST00000596338 ST18O60284 1047 aa18.31■□□□□ 0.52
TRPM4-207ENST00000596338 TEFQ10587 303 aa18.31■□□□□ 0.52
TRPM4-207ENST00000596338 TRIM44Q96DX7 344 aaPredicted RBP18.31■□□□□ 0.52
TRPM4-207ENST00000596338 MSH6P52701 1360 aa18.3■□□□□ 0.52
TRPM4-207ENST00000596338 TTC22Q5TAA0 569 aa18.3■□□□□ 0.52
TRPM4-207ENST00000596338 ANO2Q9NQ90 1003 aa18.3■□□□□ 0.52
TRPM4-207ENST00000596338 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
TRPM4-207ENST00000596338 KCNA6P17658 529 aa18.3■□□□□ 0.52
TRPM4-207ENST00000596338 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
TRPM4-207ENST00000596338 IL1RAPL2Q9NP60 686 aa18.3■□□□□ 0.52
TRPM4-207ENST00000596338 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
TRPM4-207ENST00000596338 PLEKHG3A1L390 1219 aa18.3■□□□□ 0.52
TRPM4-207ENST00000596338 REC8O95072 547 aa18.3■□□□□ 0.52
TRPM4-207ENST00000596338 SDSP20132 328 aa18.3■□□□□ 0.52
TRPM4-207ENST00000596338 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
TRPM4-207ENST00000596338 ADGRB2O60241 1585 aa18.29■□□□□ 0.52
TRPM4-207ENST00000596338 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
TRPM4-207ENST00000596338 FLIIQ13045 1269 aa18.29■□□□□ 0.52
TRPM4-207ENST00000596338 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
TRPM4-207ENST00000596338 BRPF1P55201 1214 aaPredicted RBP18.28■□□□□ 0.52
TRPM4-207ENST00000596338 MAP2P11137 1827 aaKnown RBP18.28■□□□□ 0.52
TRPM4-207ENST00000596338 PTPRCP08575 1304 aa18.28■□□□□ 0.52
TRPM4-207ENST00000596338 CDK12Q9NYV4 1490 aaPredicted RBP18.28■□□□□ 0.52
TRPM4-207ENST00000596338 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
TRPM4-207ENST00000596338 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
TRPM4-207ENST00000596338 SSFA2P28290 1259 aa18.28■□□□□ 0.52
TRPM4-207ENST00000596338 MCTP1Q6DN14 999 aa18.27■□□□□ 0.52
TRPM4-207ENST00000596338 ANXA1P04083 346 aa18.27■□□□□ 0.51
TRPM4-207ENST00000596338 GNAI3P08754 354 aa18.27■□□□□ 0.51
TRPM4-207ENST00000596338 MCCP23508 829 aa18.27■□□□□ 0.51
TRPM4-207ENST00000596338 SIRT1Q96EB6 747 aa18.26■□□□□ 0.51
TRPM4-207ENST00000596338 SURF6O75683 361 aaKnown RBP18.26■□□□□ 0.51
TRPM4-207ENST00000596338 RABEP1Q15276 862 aa18.26■□□□□ 0.51
TRPM4-207ENST00000596338 NEK4P51957 841 aa18.25■□□□□ 0.51
TRPM4-207ENST00000596338 LRRCC1Q9C099 1032 aa18.25■□□□□ 0.51
TRPM4-207ENST00000596338 LRRFIP2Q9Y608 721 aaKnown RBP18.25■□□□□ 0.51
TRPM4-207ENST00000596338 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
TRPM4-207ENST00000596338 FLT4P35916 1363 aa18.25■□□□□ 0.51
TRPM4-207ENST00000596338 PANK2Q9BZ23 570 aa18.25■□□□□ 0.51
TRPM4-207ENST00000596338 PIK3R4Q99570 1358 aa18.25■□□□□ 0.51
TRPM4-207ENST00000596338 TTC21AQ8NDW8 1320 aa18.24■□□□□ 0.51
TRPM4-207ENST00000596338 TAF7Q15545 349 aaPredicted RBP18.24■□□□□ 0.51
TRPM4-207ENST00000596338 ERC2O15083 957 aa18.23■□□□□ 0.51
TRPM4-207ENST00000596338 NUTM1Q86Y26 1132 aa18.23■□□□□ 0.51
TRPM4-207ENST00000596338 SNX21Q969T3 373 aa18.23■□□□□ 0.51
TRPM4-207ENST00000596338 PHF8Q9UPP1 1060 aa18.23■□□□□ 0.51
TRPM4-207ENST00000596338 USP6P35125 1406 aa18.22■□□□□ 0.51
TRPM4-207ENST00000596338 PTCH1Q13635 1447 aa18.22■□□□□ 0.51
TRPM4-207ENST00000596338 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
TRPM4-207ENST00000596338 HOXC9P31274 260 aa18.22■□□□□ 0.51
TRPM4-207ENST00000596338 AIMP1Q12904 312 aaKnown RBP18.22■□□□□ 0.51
TRPM4-207ENST00000596338 C1orf141Q5JVX7 400 aa18.22■□□□□ 0.51
TRPM4-207ENST00000596338 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
TRPM4-207ENST00000596338 MPRIPQ6WCQ1 1025 aa18.22■□□□□ 0.51
TRPM4-207ENST00000596338 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
TRPM4-207ENST00000596338 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
TRPM4-207ENST00000596338 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
TRPM4-207ENST00000596338 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
TRPM4-207ENST00000596338 XRCC6P12956 609 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRPM4-207ENST00000596338 RTL1A6NKG5 1358 aa18.2■□□□□ 0.5
TRPM4-207ENST00000596338 PDE1AP54750 535 aa18.2■□□□□ 0.5
TRPM4-207ENST00000596338 LRRC59Q96AG4 307 aaKnown RBP18.2■□□□□ 0.5
TRPM4-207ENST00000596338 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
TRPM4-207ENST00000596338 DIP2BQ9P265 1576 aa18.2■□□□□ 0.5
TRPM4-207ENST00000596338 CIZ1Q9ULV3 898 aaPredicted RBP18.2■□□□□ 0.5
TRPM4-207ENST00000596338 DLC1Q96QB1 1528 aa18.2■□□□□ 0.5
TRPM4-207ENST00000596338 SRCIN1Q9C0H9 1055 aa18.19■□□□□ 0.5
TRPM4-207ENST00000596338 SRGAP3O43295 1099 aa18.19■□□□□ 0.5
TRPM4-207ENST00000596338 MX1P20591 662 aa18.19■□□□□ 0.5
TRPM4-207ENST00000596338 NAP1L5Q96NT1 182 aaPredicted RBP18.19■□□□□ 0.5
TRPM4-207ENST00000596338 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
TRPM4-207ENST00000596338 SBNO1A3KN83 1393 aa18.18■□□□□ 0.5
TRPM4-207ENST00000596338 CSB-PGBD3P0DP91 1061 aa18.18■□□□□ 0.5
TRPM4-207ENST00000596338 KCNJ4P48050 445 aa18.18■□□□□ 0.5
TRPM4-207ENST00000596338 SKOR2Q2VWA4 1001 aaPredicted RBP18.18■□□□□ 0.5
TRPM4-207ENST00000596338 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
TRPM4-207ENST00000596338 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
TRPM4-207ENST00000596338 UPF3BQ9BZI7 483 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms